FFCP PHASE1:Hg19::chr12:25205666..25205690,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4033 | |EntrezGene=4033 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |HGNC=6690 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547044,ENST00000549437_5end | |association_with_transcript=0bp_to_ENST00000547044,ENST00000549437_5end | ||
|cluster_id=chr12:25205666..25205690,+ | |||
|coexpression_cluster_id=C2203 | |coexpression_cluster_id=C2203 | ||
|description=CAGE_peak_4_at_LRMP_5end | |description=CAGE_peak_4_at_LRMP_5end | ||
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|ontology_enrichment_celltype=CL:0000037!2.39e-80!172;CL:0000566!2.39e-80!172;CL:0002032!5.96e-75!165;CL:0000837!5.96e-75!165;CL:0000988!2.29e-73!182;CL:0000738!7.66e-67!140;CL:0000763!6.98e-55!112;CL:0000049!6.98e-55!112;CL:0002031!7.61e-54!124;CL:0002087!1.34e-51!119;CL:0000766!2.45e-42!76;CL:0000557!4.95e-37!71;CL:0000839!6.74e-36!70;CL:0002009!2.90e-33!65;CL:0002194!3.08e-32!63;CL:0000576!3.08e-32!63;CL:0000040!3.08e-32!63;CL:0000559!3.08e-32!63;CL:0002057!3.76e-32!42;CL:0000860!1.17e-28!45;CL:0000945!2.14e-19!24;CL:0000826!2.14e-19!24;CL:0000542!1.22e-16!53;CL:0000051!1.22e-16!53;CL:0000838!4.98e-16!52;CL:0000134!8.00e-14!358;CL:0002320!1.10e-12!365;CL:0000236!6.29e-12!14;CL:0000219!3.96e-09!390;CL:0002393!5.38e-09!9;CL:0002397!5.38e-09!9;CL:0000094!2.37e-08!8 | |ontology_enrichment_celltype=CL:0000037!2.39e-80!172;CL:0000566!2.39e-80!172;CL:0002032!5.96e-75!165;CL:0000837!5.96e-75!165;CL:0000988!2.29e-73!182;CL:0000738!7.66e-67!140;CL:0000763!6.98e-55!112;CL:0000049!6.98e-55!112;CL:0002031!7.61e-54!124;CL:0002087!1.34e-51!119;CL:0000766!2.45e-42!76;CL:0000557!4.95e-37!71;CL:0000839!6.74e-36!70;CL:0002009!2.90e-33!65;CL:0002194!3.08e-32!63;CL:0000576!3.08e-32!63;CL:0000040!3.08e-32!63;CL:0000559!3.08e-32!63;CL:0002057!3.76e-32!42;CL:0000860!1.17e-28!45;CL:0000945!2.14e-19!24;CL:0000826!2.14e-19!24;CL:0000542!1.22e-16!53;CL:0000051!1.22e-16!53;CL:0000838!4.98e-16!52;CL:0000134!8.00e-14!358;CL:0002320!1.10e-12!365;CL:0000236!6.29e-12!14;CL:0000219!3.96e-09!390;CL:0002393!5.38e-09!9;CL:0002397!5.38e-09!9;CL:0000094!2.37e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.78e-33;33!CL:0002057;9.78e-33;33!CL:0000576;4.15e-32;48!CL:0000945;3.52e-28;24!CL:0000766;4.78e-27;69!CL:0000473;2.65e-26;39!CL:0000234;2.65e-26;39!CL:0000763;2.66e-20;100!CL:0002087;2.23e-19;104!CL:0000738;7.30e-18;136!CL:0000236;7.41e-16;13!CL:0000988;3.12e-15;177!CL:0000094;1.19e-11;8!CL:0000542;2.98e-10;53!CL:0002393;1.09e-08;6!CL:0002397;1.09e-08;6!CL:0000081;7.08e-08;11!CL:0000219;1.35e-07;193 | |ontology_enrichment_celltype_v019=CL:0000860;9.78e-33;33!CL:0002057;9.78e-33;33!CL:0000576;4.15e-32;48!CL:0000945;3.52e-28;24!CL:0000766;4.78e-27;69!CL:0000473;2.65e-26;39!CL:0000234;2.65e-26;39!CL:0000763;2.66e-20;100!CL:0002087;2.23e-19;104!CL:0000738;7.30e-18;136!CL:0000236;7.41e-16;13!CL:0000988;3.12e-15;177!CL:0000094;1.19e-11;8!CL:0000542;2.98e-10;53!CL:0002393;1.09e-08;6!CL:0002397;1.09e-08;6!CL:0000081;7.08e-08;11!CL:0000219;1.35e-07;193 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.79e-90,168;CL:0000988,6.10e-84,177;CL:0002032,4.79e-83,161;CL:0000837,4.79e-83,161;CL:0000738,7.99e-83,136;CL:0002031,9.48e-66,120;CL:0002087,5.72e-65,115;CL:0000763,1.74e-64,108;CL:0000049,1.74e-64,108;CL:0000766,8.00e-63,72;CL:0000557,3.79e-53,67;CL:0000839,8.20e-52,66;CL:0002194,1.35e-47,59;CL:0000576,1.35e-47,59;CL:0000040,1.35e-47,59;CL:0000559,1.35e-47,59;CL:0002009,1.62e-47,61;CL:0000860,2.57e-47,42;CL:0002057,2.57e-47,42;CL:0000473,2.68e-45,48;CL:0000234,2.68e-45,48;CL:0000945,3.37e-28,24;CL:0000826,3.37e-28,24;CL:0000134,1.65e-23,354;CL:0002320,2.25e-22,361;CL:0000219,2.05e-18,386;CL:0000236,4.99e-17,14;CL:0000542,6.99e-16,53;CL:0000051,6.99e-16,53;CL:0000838,4.32e-15,52;CL:0000034,9.35e-15,441;CL:0000048,1.35e-14,427;CL:0000723,6.19e-14,433;CL:0002393,1.18e-12,9;CL:0002397,1.18e-12,9;CL:0000094,1.07e-11,8;CL:0000081,6.59e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-34;42!CL:0000049;2.46e-17;108!CL:0000051;2.98e-10;53 | |ontology_enrichment_development_v019=CL:0002057;8.01e-34;42!CL:0000049;2.46e-17;108!CL:0000051;2.98e-10;53 | ||
|ontology_enrichment_disease=DOID:2531!9.35e-16!51;DOID:0060083!9.35e-16!51;DOID:1240!4.57e-12!39;DOID:8692!6.81e-11!31 | |ontology_enrichment_disease=DOID:2531!9.35e-16!51;DOID:0060083!9.35e-16!51;DOID:1240!4.57e-12!39;DOID:8692!6.81e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:2531;1.86e-07;51!DOID:0060083;1.86e-07;51!DOID:0060058;3.52e-07;10!DOID:8692;8.13e-07;31 | |ontology_enrichment_disease_v019=DOID:2531;1.86e-07;51!DOID:0060083;1.86e-07;51!DOID:0060058;3.52e-07;10!DOID:8692;8.13e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.33e-13,51;DOID:0060083,2.33e-13,51;DOID:1240,5.05e-08,39;DOID:0060058,2.43e-07,10;DOID:8692,4.38e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-43!102;UBERON:0003061!2.00e-43!102;UBERON:0002193!3.75e-42!112;UBERON:0002371!1.13e-33!80;UBERON:0001474!2.50e-29!86;UBERON:0002405!5.17e-26!115;UBERON:0004765!1.08e-21!101;UBERON:0001434!1.08e-21!101;UBERON:0007023!3.50e-19!115;UBERON:0002384!1.46e-11!375;UBERON:0000178!6.94e-09!15;UBERON:0000179!6.94e-09!15;UBERON:0000463!6.94e-09!15;UBERON:0003081!3.03e-08!216;UBERON:0002619!8.44e-07!22 | |ontology_enrichment_uberon=UBERON:0002390!2.00e-43!102;UBERON:0003061!2.00e-43!102;UBERON:0002193!3.75e-42!112;UBERON:0002371!1.13e-33!80;UBERON:0001474!2.50e-29!86;UBERON:0002405!5.17e-26!115;UBERON:0004765!1.08e-21!101;UBERON:0001434!1.08e-21!101;UBERON:0007023!3.50e-19!115;UBERON:0002384!1.46e-11!375;UBERON:0000178!6.94e-09!15;UBERON:0000179!6.94e-09!15;UBERON:0000463!6.94e-09!15;UBERON:0003081!3.03e-08!216;UBERON:0002619!8.44e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-12;15!UBERON:0000179;5.60e-12;15!UBERON:0000463;5.60e-12;15!UBERON:0002390;1.03e-10;32!UBERON:0002193;4.76e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.60e-12;15!UBERON:0000179;5.60e-12;15!UBERON:0000463;5.60e-12;15!UBERON:0002390;1.03e-10;32!UBERON:0002193;4.76e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.44e-63,98;UBERON:0003061,7.44e-63,98;UBERON:0002193,8.20e-61,108;UBERON:0002405,7.08e-49,93;UBERON:0002371,3.60e-48,76;UBERON:0001474,4.12e-43,82;UBERON:0004765,1.95e-37,90;UBERON:0001434,1.19e-31,100;UBERON:0002384,2.10e-21,371;UBERON:0003081,1.09e-18,203;UBERON:0000178,4.62e-12,15;UBERON:0000179,4.62e-12,15;UBERON:0000463,4.62e-12,15;UBERON:0002204,1.54e-11,167 | |||
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| ||
|short_description=p4@LRMP | |short_description=p4@LRMP | ||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p4@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRMP_5end |
Coexpression cluster: | C2203_non_Neutrophils_Eosinophils_lymphoma_CD19_Whole_Burkitt |
Association with transcript: | 0bp_to_ENST00000547044, ENST00000549437_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.44e-63 | 98 |
blood island | 7.44e-63 | 98 |
hemolymphoid system | 8.20e-61 | 108 |
immune system | 7.08e-49 | 93 |
bone marrow | 3.60e-48 | 76 |
bone element | 4.12e-43 | 82 |
skeletal element | 1.95e-37 | 90 |
skeletal system | 1.19e-31 | 100 |
connective tissue | 2.10e-21 | 371 |
lateral plate mesoderm | 1.09e-18 | 203 |
blood | 4.62e-12 | 15 |
haemolymphatic fluid | 4.62e-12 | 15 |
organism substance | 4.62e-12 | 15 |
musculoskeletal system | 1.54e-11 | 167 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.33e-13 | 51 |
immune system cancer | 2.33e-13 | 51 |
leukemia | 5.05e-08 | 39 |
lymphoma | 2.43e-07 | 10 |
myeloid leukemia | 4.38e-07 | 31 |