FFCP PHASE1:Hg19::chr20:57875267..57875287,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:57875267..57875287,+
|short_description=p4@EDN3
|description=CAGE_peak_4_at_EDN3_5end
|association_with_transcript=-194bp_to_ENST00000337938_5end
|Entrez...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=P14138 | |UniProt=P14138 | ||
|association_with_transcript=-194bp_to_ENST00000337938_5end | |||
|cluster_id=chr20:57875267..57875287,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_EDN3_5end | |||
|id=chr20:57875267..57875287,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.58e-08!3;CL:0002577!1.58e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.48e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.48e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.24e-18;3!UBERON:0006298;4.72e-15;1!UBERON:0004874;6.22e-15;1!UBERON:0008801;7.13e-15;1!UBERON:0009143;2.11e-14;1!UBERON:0005425;2.11e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-58!115;UBERON:0001049!5.54e-34!57;UBERON:0005068!5.54e-34!57;UBERON:0006241!5.54e-34!57;UBERON:0007135!5.54e-34!57;UBERON:0002616!6.45e-28!59;UBERON:0003080!9.73e-27!42;UBERON:0000955!1.03e-25!69;UBERON:0006238!1.03e-25!69;UBERON:0005743!2.23e-25!86;UBERON:0001017!3.31e-25!82;UBERON:0000073!4.16e-25!94;UBERON:0001016!4.16e-25!94;UBERON:0002780!5.48e-25!41;UBERON:0001890!5.48e-25!41;UBERON:0006240!5.48e-25!41;UBERON:0003075!1.45e-22!86;UBERON:0007284!1.45e-22!86;UBERON:0001893!3.23e-21!34;UBERON:0002346!3.90e-21!90;UBERON:0002791!6.91e-20!33;UBERON:0002020!2.18e-19!34;UBERON:0003528!2.18e-19!34;UBERON:0001869!1.63e-18!32;UBERON:0000033!1.74e-18!123;UBERON:0000153!2.16e-18!129;UBERON:0007811!2.16e-18!129;UBERON:0003056!4.52e-18!61;UBERON:0004121!5.01e-16!169;UBERON:0000924!2.20e-15!173;UBERON:0006601!2.20e-15!173;UBERON:0002619!6.86e-15!22;UBERON:0001950!3.62e-14!20;UBERON:0000956!8.86e-13!25;UBERON:0000203!8.86e-13!25;UBERON:0002298!1.16e-12!8;UBERON:0000062!1.29e-11!511;UBERON:0000064!1.36e-08!219;UBERON:0000922!1.57e-08!612;UBERON:0004111!1.88e-08!241;UBERON:0002308!2.21e-08!9;UBERON:0000125!2.21e-08!9;UBERON:0003076!2.27e-08!15;UBERON:0003057!2.27e-08!15;UBERON:0000200!2.37e-08!6;UBERON:0002050!3.07e-08!605;UBERON:0005423!3.07e-08!605;UBERON:0000481!5.37e-08!347;UBERON:0000477!6.61e-08!286;UBERON:0000475!7.60e-08!365;UBERON:0009663!9.61e-08!7;UBERON:0000923!1.02e-07!604;UBERON:0005291!1.02e-07!604;UBERON:0006598!1.02e-07!604;UBERON:0002532!1.02e-07!604;UBERON:0004732!1.70e-07!13;UBERON:0000467!2.29e-07!625;UBERON:0000480!2.54e-07!626;UBERON:0003135!3.09e-07!11;UBERON:0000468!4.56e-07!659;UBERON:0001896!5.07e-07!3;UBERON:0005290!5.07e-07!3;UBERON:0010096!5.07e-07!3;UBERON:0002771!5.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.12e-28;2!UBERON:0001044;5.20e-21;6!UBERON:0003293;5.20e-21;6!UBERON:0003294;5.20e-21;6!UBERON:0010047;5.20e-21;6!UBERON:0003408;5.20e-21;6!UBERON:0000167;5.20e-21;6!UBERON:0001041;1.13e-15;14!UBERON:0001736;4.72e-15;1!UBERON:0000989;6.22e-15;1!UBERON:0008811;6.22e-15;1!UBERON:0001831;7.13e-15;1!UBERON:0001567;7.13e-15;1!UBERON:0000941;2.11e-14;1!UBERON:0001785;2.11e-14;1!UBERON:0002464;2.11e-14;1!UBERON:0004904;2.11e-14;1!UBERON:0001021;2.11e-14;1!UBERON:0001987;3.60e-14;4!UBERON:0004921;6.88e-09;33!UBERON:0004089;4.38e-08;2!UBERON:0000341;7.52e-08;2!UBERON:0003714;7.52e-08;2!UBERON:0005162;7.52e-08;2!UBERON:0000122;7.52e-08;2!UBERON:0000161;5.08e-07;19!UBERON:0000166;5.08e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.13e-28,2;UBERON:0001044,5.20e-21,6;UBERON:0003293,5.20e-21,6;UBERON:0003294,5.20e-21,6;UBERON:0010047,5.20e-21,6;UBERON:0000167,5.20e-21,6;UBERON:0007023,2.15e-15,114;UBERON:0001736,4.73e-15,1;UBERON:0006298,4.73e-15,1;UBERON:0000989,6.22e-15,1;UBERON:0008811,6.22e-15,1;UBERON:0006258,6.22e-15,1;UBERON:0005876,6.22e-15,1;UBERON:0004874,6.22e-15,1;UBERON:0001831,7.13e-15,1;UBERON:0001567,7.13e-15,1;UBERON:0008801,7.13e-15,1;UBERON:0000941,3.15e-14,1;UBERON:0001785,3.15e-14,1;UBERON:0002464,3.15e-14,1;UBERON:0004904,3.15e-14,1;UBERON:0001021,3.15e-14,1;UBERON:0003902,3.15e-14,1;UBERON:0005425,3.15e-14,1;UBERON:0001987,3.61e-14,4;UBERON:0004340,3.61e-14,4;UBERON:0003408,7.30e-13,10;UBERON:0000966,9.68e-10,6;UBERON:0005388,9.68e-10,6;UBERON:0001802,9.68e-10,6;UBERON:0003124,1.72e-08,7;UBERON:0004089,4.38e-08,2;UBERON:0000341,6.58e-08,2;UBERON:0003714,9.19e-08,2;UBERON:0005162,9.19e-08,2;UBERON:0000122,9.19e-08,2;UBERON:0000153,1.83e-07,62;UBERON:0007811,1.83e-07,62;UBERON:0001444,8.29e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93978032976839,0,0.90392296312213,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0.252071696221718,0.345786262321089,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,4.38606213485746,6.94695649745012,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,3.85973338553944,0,0,0,0,0,0,0,14.6277301998894,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,1.54348316215889,0.874238242015829,0,0,0,0,0.891139200981258,0.8453114551668,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,16.0555249191589,0.143339583151451,0,0.475940431336403,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0.378893491091197,0.803892390468535,0,0.20686599172379,1.70587185520785,0,0,0,0,2.99141643907375,0.202117188958219,0.435433495793923,0.684466602170562,0,0.430333232356058,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.331737779793674,0,0.219385397153973,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93978032976839,0,0.90392296312213,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0.252071696221718,0.345786262321089,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,4.38606213485746,6.94695649745012,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0.203909198930495,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,3.85973338553944,0,0,0,0,0,0,0,14.6277301998894,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0,1.54348316215889,0.874238242015829,0,0,0,0,0.891139200981258,0.8453114551668,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,16.0555249191589,0.143339583151451,0,0.475940431336403,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0.378893491091197,0.803892390468535,0,0.20686599172379,1.70587185520785,0,0,0,0,2.99141643907375,0.202117188958219,0.435433495793923,0.684466602170562,0,0.430333232356058,0.665320713092027,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p4@EDN3 | |||
}} | }} |
Latest revision as of 07:34, 17 September 2015
Short description: | p4@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EDN3_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -194bp_to_ENST00000337938_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | P14138 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.48e-18 | 3 |