FFCP PHASE1:Hg19::chr20:62710880..62710898,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:62710880..62710898,-
|short_description=p3@RGS19
|description=CAGE_peak_3_at_RGS19_5end
|association_with_transcript=-35bp_to_ENST00000395042,NM_005873,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10287 | |EntrezGene=10287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13735 | |HGNC=13735 | ||
|TSSclassifier=strong | |||
|UniProt=P49795 | |UniProt=P49795 | ||
|association_with_transcript=-35bp_to_ENST00000395042,NM_005873,uc002yhy.2,uc002yhz.2_5end | |||
|cluster_id=chr20:62710880..62710898,- | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_3_at_RGS19_5end | |||
|id=chr20:62710880..62710898,- | |||
|ontology_enrichment_celltype=CL:0000037!1.30e-50!172;CL:0000566!1.30e-50!172;CL:0002032!8.58e-49!165;CL:0000837!8.58e-49!165;CL:0000738!6.79e-48!140;CL:0000988!3.86e-47!182;CL:0002087!7.03e-43!119;CL:0002031!2.18e-42!124;CL:0000763!3.03e-30!112;CL:0000049!3.03e-30!112;CL:0000766!1.69e-29!76;CL:0000557!9.25e-27!71;CL:0000839!4.36e-25!70;CL:0002009!1.33e-24!65;CL:0002194!3.24e-24!63;CL:0000576!3.24e-24!63;CL:0000040!3.24e-24!63;CL:0000559!3.24e-24!63;CL:0002057!2.24e-17!42;CL:0000860!6.38e-17!45;CL:0000542!2.93e-16!53;CL:0000051!2.93e-16!53;CL:0000838!5.93e-16!52;CL:0000945!2.35e-11!24;CL:0000826!2.35e-11!24;CL:0000134!5.40e-09!358;CL:0000236!1.98e-08!14;CL:0002320!3.28e-08!365 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.07e-22;69!CL:0000576;7.25e-22;48!CL:0000473;1.27e-18;39!CL:0000234;1.27e-18;39!CL:0000860;2.84e-15;33!CL:0002057;2.84e-15;33!CL:0000763;5.26e-15;100!CL:0000738;2.75e-14;136!CL:0002087;1.63e-11;104!CL:0000988;2.86e-10;177!CL:0000235;9.48e-10;6!CL:0000094;1.97e-09;8!CL:0000945;6.86e-09;24!CL:0000542;1.42e-08;53!CL:0000236;2.07e-08;13!CL:0002393;2.55e-08;6!CL:0002397;2.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.27e-62,136;CL:0000037,1.52e-61,168;CL:0002032,1.88e-60,161;CL:0000837,1.88e-60,161;CL:0000988,5.83e-57,177;CL:0000766,2.13e-54,72;CL:0002031,8.31e-54,120;CL:0002087,5.43e-53,115;CL:0000763,3.31e-48,108;CL:0000049,3.31e-48,108;CL:0000557,5.46e-47,67;CL:0000839,3.47e-44,66;CL:0002009,1.19e-41,61;CL:0002194,1.25e-41,59;CL:0000576,1.25e-41,59;CL:0000040,1.25e-41,59;CL:0000559,1.25e-41,59;CL:0000473,2.77e-33,48;CL:0000234,2.77e-33,48;CL:0000860,6.48e-26,42;CL:0002057,6.48e-26,42;CL:0000134,2.94e-17,354;CL:0002320,2.09e-16,361;CL:0000219,1.93e-13,386;CL:0002393,2.12e-12,9;CL:0002397,2.12e-12,9;CL:0000838,1.49e-11,52;CL:0000542,3.35e-11,53;CL:0000051,3.35e-11,53;CL:0000048,6.45e-10,427;CL:0000235,1.69e-09,6;CL:0000723,1.92e-09,433;CL:0000094,2.11e-09,8;CL:0000236,2.48e-09,14;CL:0000945,5.83e-09,24;CL:0000826,5.83e-09,24;CL:0000034,7.76e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;8.40e-19;42!CL:0000049;1.93e-14;108!CL:0000051;1.42e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.74e-32!102;UBERON:0003061!8.74e-32!102;UBERON:0002193!3.14e-31!112;UBERON:0002371!3.61e-22!80;UBERON:0001474!9.66e-20!86;UBERON:0002405!2.19e-17!115;UBERON:0004765!4.76e-15!101;UBERON:0001434!4.76e-15!101;UBERON:0003081!8.91e-12!216;UBERON:0002384!6.39e-08!375;UBERON:0000178!1.26e-07!15;UBERON:0000179!1.26e-07!15;UBERON:0000463!1.26e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.09e-14;15!UBERON:0000179;5.09e-14;15!UBERON:0000463;5.09e-14;15!UBERON:0002390;2.18e-10;32!UBERON:0002193;4.10e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.24e-58,98;UBERON:0003061,1.24e-58,98;UBERON:0002193,1.34e-54,108;UBERON:0002405,1.85e-41,93;UBERON:0002371,2.30e-41,76;UBERON:0001474,4.17e-37,82;UBERON:0004765,2.52e-32,90;UBERON:0001434,1.90e-27,100;UBERON:0003081,1.53e-20,203;UBERON:0002384,2.99e-15,371;UBERON:0000178,5.24e-14,15;UBERON:0000179,5.24e-14,15;UBERON:0000463,5.24e-14,15;UBERON:0002204,2.08e-10,167;UBERON:0000926,6.25e-07,315;UBERON:0004120,6.25e-07,315;UBERON:0006603,6.25e-07,315 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0.626909442956176,0,0,0,1.22261449196722,0.903106483949403,0.629686250509434,1.18009283054671,0,1.39334510984468,1.83884244895785,0.6024118375565,0,1.62681121218633,0.853015394924529,0.587200878669695,1.10799081706375,1.80490002723128,3.03815219002193,4.70222495903841,2.91504299417082,3.09090681161024,6.54292074508041,3.02300754951048,7.03493777444667,4.41615170120801,2.46700732813095,2.78735733805593,0.863077176966451,2.0492856522328,0.47296445977717,0.689491361473237,0,0,5.64727018627814,4.36649840092553,2.47195832889593,2.75475503133812,0.962787081228281,1.27867425159808,6.26717470354761,2.99195486432448,1.27867425159808,0.580418477257168,1.13477044938228,0.622822248995575,1.00499466102697,1.5644487552606,0.217188844705117,1.81619850790011,0.736555271975129,0,2.5350634357433,3.18906449947565,2.72556239160889,5.05478840159228,3.30389164251314,1.6072558669708,5.41524213108372,5.56966696157452,2.19196984517561,1.75996244461323,4.91524750135918,4.44754626931777,3.41384178053206,2.40237592221607,5.74752439954483,4.62731410949403,2.86216126360609,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0.790152254325231,0.393419540227666,0.393010762749165,0.822405995998037,3.17654341242288,1.95553359980154,1.89379122293893,0,3.56513462032555,1.76763544484902,1.32920336750173,0.812411591295047,5.37983542847836,3.90178042679635,2.63100647365882,3.31620021343018,1.15921234294021,1.33457906845854,1.87278579662799,0,2.60611488204402,3.06576394881537,3.4362744548263,1.26509846009751,3.18565414324097,2.60433381542567,1.90090408889675,2.10805166708882,0.76791966692651,0,2.60454977248419,3.28451198768419,0.201606743224732,1.06976078313403,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.261958150995425,1.09288586487763,0.370784442784429,2.59637914923747,4.70150290708022,3.85578085504709,0.476981248610684,0,0.371457501329565,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0,0.17859945656816,0,0.450445921933289,1.53316637465883,0,0.366403487860815,5.27121669744253,3.87780264148325,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0,0.491337269247072,0,0,0,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0.226864366320042,0,0,0,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0.302256294682921,0.169560592310488,0.57978255948989,0.545492241181669,0.860413786167011,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,1.03993478527958,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,1.71697232418975,6.40164215827233,3.04205544681009,6.68840230299277,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,1.53353071666084,0,2.99364675644969,4.35389042635621,4.75595846275973,3.91351543621778,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,2.43247561282381,3.01354254859276,2.10833939483032,0,0,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0.985153801009636,1.07813787429759,0.77005821767849,0,0,0,0,0,5.99205619157746,14.9580729602012,13.2612964299531,0,0,0,0.207970861530807,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,1.86091223510599,3.01999881146064,2.13455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,3.08454505380579,0,0.501689773854853,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.618246069886334,0.640986253728404,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0.2023155617111,0,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,0.842516912477962,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.845086807596724,0,0,0.7133421029625,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.847294206991012,0.43050537267123,0,0.443430153536676,0.459446800413919,5.07447609232169,4.58782324285425,6.26611905891579,4.76463550915578,5.34770955012053,6.48473311192717,2.70015718619057,6.34500141035416,0.534120355637366,0,0.245040215981032,0.7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| ||
|short_description=p3@RGS19 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p3@RGS19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGS19_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | -35bp_to_ENST00000395042, NM_005873, uc002yhy.2, uc002yhz.2_5end |
EntrezGene: | RGS19 |
HGNC: | 13735 |
UniProt: | P49795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.24e-58 | 98 |
blood island | 1.24e-58 | 98 |
hemolymphoid system | 1.34e-54 | 108 |
immune system | 1.85e-41 | 93 |
bone marrow | 2.30e-41 | 76 |
bone element | 4.17e-37 | 82 |
skeletal element | 2.52e-32 | 90 |
skeletal system | 1.90e-27 | 100 |
lateral plate mesoderm | 1.53e-20 | 203 |
connective tissue | 2.99e-15 | 371 |
blood | 5.24e-14 | 15 |
haemolymphatic fluid | 5.24e-14 | 15 |
organism substance | 5.24e-14 | 15 |
musculoskeletal system | 2.08e-10 | 167 |
mesoderm | 6.25e-07 | 315 |
mesoderm-derived structure | 6.25e-07 | 315 |
presumptive mesoderm | 6.25e-07 | 315 |