FFCP PHASE1:Hg19::chr17:39942220..39942242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKY1 | |UniProt=C9JKY1 | ||
|association_with_transcript=79bp_to_ENST00000449889_5end | |association_with_transcript=79bp_to_ENST00000449889_5end | ||
|cluster_id=chr17:39942220..39942242,- | |||
|coexpression_cluster_id=C226 | |coexpression_cluster_id=C226 | ||
|description=CAGE_peak_2_at_JUP_5end | |description=CAGE_peak_2_at_JUP_5end | ||
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|ontology_enrichment_celltype=CL:0000066!8.66e-42!254;CL:0002076!1.08e-22!43;CL:0000223!3.76e-18!59;CL:0002251!3.35e-12!21;CL:0002368!1.97e-10!13;CL:0002159!3.11e-08!13;CL:0002202!2.64e-07!9;CL:0002632!2.64e-07!9 | |ontology_enrichment_celltype=CL:0000066!8.66e-42!254;CL:0002076!1.08e-22!43;CL:0000223!3.76e-18!59;CL:0002251!3.35e-12!21;CL:0002368!1.97e-10!13;CL:0002159!3.11e-08!13;CL:0002202!2.64e-07!9;CL:0002632!2.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.32e-23;42!CL:0002251;6.74e-16;20!CL:0002368;1.16e-13;13!CL:0002202;1.76e-09;9!CL:0002632;1.76e-09;9!CL:0002159;1.15e-08;14!CL:0000622;7.06e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;1.32e-23;42!CL:0002251;6.74e-16;20!CL:0002368;1.16e-13;13!CL:0002202;1.76e-09;9!CL:0002632;1.76e-09;9!CL:0002159;1.15e-08;14!CL:0000622;7.06e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.35e-43,253;CL:0002076,8.56e-31,42;CL:0000223,4.15e-23,58;CL:0002251,5.65e-16,20;CL:0002368,1.18e-13,13;CL:0002202,1.80e-09,9;CL:0002632,1.80e-09,9;CL:0002159,1.19e-08,14;CL:0000622,6.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;8.81e-12;58!UBERON:0008947;1.14e-08;29!UBERON:0006595;2.82e-08;86 | |ontology_enrichment_development_v019=CL:0000223;8.81e-12;58!UBERON:0008947;1.14e-08;29!UBERON:0006595;2.82e-08;86 | ||
|ontology_enrichment_disease=DOID:305!6.02e-27!106;DOID:0050687!1.26e-16!143;DOID:1749!1.26e-12!14;DOID:299!9.45e-09!25 | |ontology_enrichment_disease=DOID:305!6.02e-27!106;DOID:0050687!1.26e-16!143;DOID:1749!1.26e-12!14;DOID:299!9.45e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.05e-16;14!DOID:299;4.33e-11;25!DOID:305;2.65e-08;106 | |ontology_enrichment_disease_v019=DOID:1749;2.05e-16;14!DOID:299;4.33e-11;25!DOID:305;2.65e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.86e-27,106;DOID:0050687,3.11e-18,143;DOID:1749,2.31e-16,14;DOID:299,4.11e-11,25;DOID:162,9.65e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.18e-29!169;UBERON:0000925!3.18e-29!169;UBERON:0006595!3.18e-29!169;UBERON:0001007!1.19e-22!155;UBERON:0001555!1.19e-22!155;UBERON:0007026!1.19e-22!155;UBERON:0001004!4.15e-22!72;UBERON:0004921!5.95e-21!129;UBERON:0004185!5.95e-21!129;UBERON:0000077!1.34e-20!130;UBERON:0000065!3.37e-17!53;UBERON:0001041!3.22e-15!98;UBERON:0008947!5.36e-14!38;UBERON:0003258!5.36e-14!38;UBERON:0000072!2.46e-13!46;UBERON:0000464!1.02e-12!104;UBERON:0000466!9.68e-12!126;UBERON:0005911!5.53e-11!82;UBERON:0000161!6.40e-11!35;UBERON:0005153!6.74e-11!37;UBERON:0005178!2.36e-09!34;UBERON:0002224!2.36e-09!34;UBERON:0003104!4.30e-09!238;UBERON:0009142!4.30e-09!238;UBERON:0005181!7.40e-09!35;UBERON:0000166!9.49e-09!21;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0000062!1.52e-08!511;UBERON:0001008!4.41e-08!45;UBERON:0005157!6.11e-08!51;UBERON:0000064!8.66e-08!219;UBERON:0006554!1.07e-07!44;UBERON:0005177!1.71e-07!107;UBERON:0000344!2.17e-07!12;UBERON:0003133!2.25e-07!48;UBERON:0000915!2.25e-07!52;UBERON:0002048!2.32e-07!22;UBERON:0000117!2.32e-07!22;UBERON:0000171!2.32e-07!22;UBERON:0000170!2.32e-07!22;UBERON:0005597!2.32e-07!22;UBERON:0000118!2.32e-07!22;UBERON:0005631!3.32e-07!14;UBERON:0000158!3.32e-07!14;UBERON:0000468!3.42e-07!659;UBERON:0003100!4.85e-07!41;UBERON:0004807!5.34e-07!28;UBERON:0000922!5.90e-07!612;UBERON:0001557!6.75e-07!19;UBERON:0001048!7.47e-07!168;UBERON:0004175!8.30e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!3.18e-29!169;UBERON:0000925!3.18e-29!169;UBERON:0006595!3.18e-29!169;UBERON:0001007!1.19e-22!155;UBERON:0001555!1.19e-22!155;UBERON:0007026!1.19e-22!155;UBERON:0001004!4.15e-22!72;UBERON:0004921!5.95e-21!129;UBERON:0004185!5.95e-21!129;UBERON:0000077!1.34e-20!130;UBERON:0000065!3.37e-17!53;UBERON:0001041!3.22e-15!98;UBERON:0008947!5.36e-14!38;UBERON:0003258!5.36e-14!38;UBERON:0000072!2.46e-13!46;UBERON:0000464!1.02e-12!104;UBERON:0000466!9.68e-12!126;UBERON:0005911!5.53e-11!82;UBERON:0000161!6.40e-11!35;UBERON:0005153!6.74e-11!37;UBERON:0005178!2.36e-09!34;UBERON:0002224!2.36e-09!34;UBERON:0003104!4.30e-09!238;UBERON:0009142!4.30e-09!238;UBERON:0005181!7.40e-09!35;UBERON:0000166!9.49e-09!21;UBERON:0005156!1.23e-08!59;UBERON:0000990!1.23e-08!59;UBERON:0000062!1.52e-08!511;UBERON:0001008!4.41e-08!45;UBERON:0005157!6.11e-08!51;UBERON:0000064!8.66e-08!219;UBERON:0006554!1.07e-07!44;UBERON:0005177!1.71e-07!107;UBERON:0000344!2.17e-07!12;UBERON:0003133!2.25e-07!48;UBERON:0000915!2.25e-07!52;UBERON:0002048!2.32e-07!22;UBERON:0000117!2.32e-07!22;UBERON:0000171!2.32e-07!22;UBERON:0000170!2.32e-07!22;UBERON:0005597!2.32e-07!22;UBERON:0000118!2.32e-07!22;UBERON:0005631!3.32e-07!14;UBERON:0000158!3.32e-07!14;UBERON:0000468!3.42e-07!659;UBERON:0003100!4.85e-07!41;UBERON:0004807!5.34e-07!28;UBERON:0000922!5.90e-07!612;UBERON:0001557!6.75e-07!19;UBERON:0001048!7.47e-07!168;UBERON:0004175!8.30e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;6.42e-12;44!UBERON:0000072;3.38e-11;37!UBERON:0001004;6.21e-11;65!UBERON:0005911;3.83e-09;36!UBERON:0000161;5.57e-09;19!UBERON:0000166;5.57e-09;19!UBERON:0000344;1.17e-08;20!UBERON:0004921;1.24e-08;33!UBERON:0004807;1.70e-08;22!UBERON:0000165;3.67e-08;28!UBERON:0005178;4.91e-08;34!UBERON:0002224;4.91e-08;34!UBERON:0000974;8.75e-08;6!UBERON:0005181;1.12e-07;35!UBERON:0001737;1.20e-07;9!UBERON:0001557;1.20e-07;9!UBERON:0007196;2.11e-07;15!UBERON:0001558;2.11e-07;15!UBERON:0001555;2.12e-07;54!UBERON:0001041;2.42e-07;14!UBERON:0000365;2.53e-07;5!UBERON:0000002;6.92e-07;6!UBERON:0001560;6.92e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000065;6.42e-12;44!UBERON:0000072;3.38e-11;37!UBERON:0001004;6.21e-11;65!UBERON:0005911;3.83e-09;36!UBERON:0000161;5.57e-09;19!UBERON:0000166;5.57e-09;19!UBERON:0000344;1.17e-08;20!UBERON:0004921;1.24e-08;33!UBERON:0004807;1.70e-08;22!UBERON:0000165;3.67e-08;28!UBERON:0005178;4.91e-08;34!UBERON:0002224;4.91e-08;34!UBERON:0000974;8.75e-08;6!UBERON:0005181;1.12e-07;35!UBERON:0001737;1.20e-07;9!UBERON:0001557;1.20e-07;9!UBERON:0007196;2.11e-07;15!UBERON:0001558;2.11e-07;15!UBERON:0001555;2.12e-07;54!UBERON:0001041;2.42e-07;14!UBERON:0000365;2.53e-07;5!UBERON:0000002;6.92e-07;6!UBERON:0001560;6.92e-07;6 | ||
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| ||
|short_description=p2@JUP | |short_description=p2@JUP | ||
}} | }} |
Latest revision as of 07:15, 20 September 2015
Short description: | p2@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JUP_5end |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | 79bp_to_ENST00000449889_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9JKY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.35e-43 | 253 |
endo-epithelial cell | 8.56e-31 | 42 |
endodermal cell | 4.15e-23 | 58 |
epithelial cell of alimentary canal | 5.65e-16 | 20 |
respiratory epithelial cell | 1.18e-13 | 13 |
epithelial cell of tracheobronchial tree | 1.80e-09 | 9 |
epithelial cell of lower respiratory tract | 1.80e-09 | 9 |
general ecto-epithelial cell | 1.19e-08 | 14 |
acinar cell | 6.41e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.86e-27 | 106 |
cell type cancer | 3.11e-18 | 143 |
squamous cell carcinoma | 2.31e-16 | 14 |
adenocarcinoma | 4.11e-11 | 25 |
cancer | 9.65e-07 | 235 |