FFCP PHASE1:Hg19::chr10:105049488..105049499,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9118 | |EntrezGene=9118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6057 | |HGNC=6057 | ||
|TSSclassifier=strong | |||
|UniProt=Q96J72 | |UniProt=Q96J72 | ||
|association_with_transcript=135bp_to_AY034000_5end | |association_with_transcript=135bp_to_AY034000_5end | ||
|cluster_id=chr10:105049488..105049499,+ | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_8_at_INA_5end | |description=CAGE_peak_8_at_INA_5end | ||
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|ontology_enrichment_celltype=CL:0000540!2.88e-09!6;CL:0000031!2.88e-09!6;CL:0000404!2.88e-09!6;CL:0000047!8.34e-07!8 | |ontology_enrichment_celltype=CL:0000540!2.88e-09!6;CL:0000031!2.88e-09!6;CL:0000404!2.88e-09!6;CL:0000047!8.34e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.90e-22;6!CL:0000404;8.90e-22;6!CL:0002553;2.75e-15;1!CL:0002319;1.24e-08;25!CL:0000123;2.67e-08;2!CL:0000242;2.67e-08;2 | |ontology_enrichment_celltype_v019=CL:0000540;8.90e-22;6!CL:0000404;8.90e-22;6!CL:0002553;2.75e-15;1!CL:0002319;1.24e-08;25!CL:0000123;2.67e-08;2!CL:0000242;2.67e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.19e-22,6;CL:0000031,7.19e-22,6;CL:0000404,7.19e-22,6;CL:0000047,1.41e-16,8;CL:0002553,2.75e-15,1;CL:0002319,1.14e-08,25;CL:0000242,2.48e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;8.90e-22;6 | |ontology_enrichment_development_v019=CL:0000031;8.90e-22;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002021;2.45e-26;5!UBERON:0001950;2.29e-24;20!UBERON:0002619;3.10e-22;22!UBERON:0000956;1.19e-19;25!UBERON:0000203;1.19e-19;25!UBERON:0002791;4.30e-15;32!UBERON:0001869;5.36e-15;32!UBERON:0001893;4.31e-13;34!UBERON:0003528;1.71e-11;34!UBERON:0002020;1.71e-11;34!UBERON:0002780;1.20e-09;41!UBERON:0001890;1.20e-09;41!UBERON:0001871;2.98e-09;6!UBERON:0002771;1.20e-08;2!UBERON:0000922;1.39e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0002021;2.45e-26;5!UBERON:0001950;2.29e-24;20!UBERON:0002619;3.10e-22;22!UBERON:0000956;1.19e-19;25!UBERON:0000203;1.19e-19;25!UBERON:0002791;4.30e-15;32!UBERON:0001869;5.36e-15;32!UBERON:0001893;4.31e-13;34!UBERON:0003528;1.71e-11;34!UBERON:0002020;1.71e-11;34!UBERON:0002780;1.20e-09;41!UBERON:0001890;1.20e-09;41!UBERON:0001871;2.98e-09;6!UBERON:0002771;1.20e-08;2!UBERON:0000922;1.39e-08;49 | ||
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| ||
|short_description=p8@INA | |short_description=p8@INA | ||
}} | }} |
Latest revision as of 03:26, 16 September 2015
Short description: | p8@INA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_INA_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 135bp_to_AY034000_5end |
EntrezGene: | INA |
HGNC: | 6057 |
UniProt: | Q96J72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.19e-22 | 6 |
neuroblast | 7.19e-22 | 6 |
electrically signaling cell | 7.19e-22 | 6 |
neuronal stem cell | 1.41e-16 | 8 |
lung fibroblast | 2.75e-15 | 1 |
neural cell | 1.14e-08 | 25 |
Merkel cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.79e-26 | 5 |
neocortex | 2.44e-24 | 20 |
regional part of cerebral cortex | 3.28e-22 | 22 |
cerebral cortex | 1.25e-19 | 25 |
pallium | 1.25e-19 | 25 |
regional part of telencephalon | 2.02e-15 | 32 |
cerebral hemisphere | 2.02e-15 | 32 |
brain grey matter | 1.58e-14 | 34 |
gray matter | 1.58e-14 | 34 |
telencephalon | 1.58e-14 | 34 |
central nervous system | 4.40e-13 | 81 |
regional part of forebrain | 4.59e-12 | 41 |
forebrain | 4.59e-12 | 41 |
anterior neural tube | 4.59e-12 | 41 |
future forebrain | 4.59e-12 | 41 |
nervous system | 1.03e-11 | 89 |
regional part of nervous system | 2.55e-09 | 53 |
regional part of brain | 2.55e-09 | 53 |
temporal lobe | 2.92e-09 | 6 |
neural tube | 8.20e-09 | 56 |
neural rod | 8.20e-09 | 56 |
future spinal cord | 8.20e-09 | 56 |
neural keel | 8.20e-09 | 56 |
middle temporal gyrus | 1.20e-08 | 2 |
pre-chordal neural plate | 4.48e-08 | 61 |
ectoderm-derived structure | 3.86e-07 | 171 |
ectoderm | 3.86e-07 | 171 |
presumptive ectoderm | 3.86e-07 | 171 |
brain | 4.10e-07 | 68 |
future brain | 4.10e-07 | 68 |