FFCP PHASE1:Mm9::chr15:77666718..77666746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |MCL_coexpression_id=98 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:77666718..77666746,- | |||
|description=CAGE_peak_at_chr15:77666718..77666746,- | |description=CAGE_peak_at_chr15:77666718..77666746,- | ||
|id=chr15:77666718..77666746,- | |id=chr15:77666718..77666746,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.07e-14,6;CL:0000187,3.07e-14,6;CL:0000056,3.07e-14,6;CL:0000222,4.44e-12,7;CL:0000355,3.38e-09,9;CL:0000624,7.62e-09,8;CL:0000192,2.15e-08,3;CL:0000359,2.15e-08,3;CL:0002539,2.15e-08,3;CL:0000514,2.15e-08,3;CL:0000068,8.39e-08,3;CL:0002202,8.39e-08,3;CL:0000069,8.39e-08,3;CL:0002632,8.39e-08,3;CL:0002368,8.39e-08,3;CL:0000307,8.39e-08,3;CL:0000377,8.39e-08,3;CL:0000791,8.77e-08,9;CL:0000789,8.77e-08,9;CL:0002420,8.77e-08,9;CL:0002419,8.77e-08,9;CL:0000790,8.77e-08,9;CL:0002494,1.79e-07,3;CL:0000737,1.79e-07,3;CL:0000746,1.79e-07,3;CL:0000513,1.79e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.31e-08!131;UBERON:0009142!7.31e-08!131 | |ontology_enrichment_uberon=UBERON:0003104!7.31e-08!131;UBERON:0009142!7.31e-08!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,3.41e-11,7;UBERON:0006858,3.41e-11,7;UBERON:0001134,3.38e-09,9;UBERON:0002036,3.38e-09,9;UBERON:0002385,3.38e-09,9;UBERON:0000486,3.38e-09,9;UBERON:0007503,3.38e-09,9;UBERON:0001015,3.38e-09,9;UBERON:0002329,3.38e-09,9;UBERON:0003082,3.38e-09,9;UBERON:0003059,3.38e-09,9;UBERON:0007282,3.38e-09,9;UBERON:0004290,3.38e-09,9;UBERON:0009618,3.38e-09,9;UBERON:0003064,6.68e-09,14;UBERON:0001135,2.15e-08,3;UBERON:0004237,2.15e-08,3;UBERON:0004695,2.15e-08,3;UBERON:0002111,2.15e-08,3;UBERON:0004178,2.15e-08,3;UBERON:0000383,3.45e-08,10;UBERON:0005256,6.20e-08,45;UBERON:0003126,8.39e-08,3;UBERON:0001005,8.39e-08,3;UBERON:0007196,8.39e-08,3;UBERON:0001558,8.39e-08,3;UBERON:0007524,2.30e-07,11;UBERON:0003077,2.30e-07,11;UBERON:0007285,2.30e-07,11;UBERON:0002100,9.19e-07,90 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.700837921786577,1.29123323441576,1.12630977721333,2.57470978954193,1.71217968225505,1.19658238493005,0.684802919724823,0.611942816932982,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,0,1.76469446409304,1.36609096991689,1.94204141212461,14.604030885167,13.6858857146345,7.70896359079063,0.782391344348039,0.436050312760893,0.439372365468944,0.58328969722285,1.25987779462826,0,0.671130424230945,1.45072428402269,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,0,0,0,2.71075625655306,2.66788438833342,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.579728977403356,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,0,0,0,3.030874574157,2.02687892380079,2.52762222507392,0,0.258937883647172,1.7813056687779,0.346970653532272,2.13125834818499,2.53677046981664,2.86373017049983,2.58695155698551,1.0053327306374,0.494389935468748,0.578397427679647,0.884610551949874,0.808834249737046,0,0.484875253135222,0,0.292780797011547,0,1.27728527604296,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.536825675041487,0,0,0,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,1.1948476395262,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.811440485554012,1.20588579876208,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0,0.780534591431195,0.472905432318573,1.32878813789265,0.478364305972461,0.81931657357869,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0.827810238914197,0,0,1.3114795630134,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.425820255624806,0,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.377210159511796,1.18120757152309,0.614870295887855,0,0,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,1.0591603543191,2.42581237860458,0.32977250588296,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,0.683471138605126,0,0.339956859987711,0,0.414599921413271,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.909188012978695,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,1.16243841129958,0.337912250981556,1.17357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.269141569828427,0.167884616364078,1.15913756419314,1.87682475451182,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.565879024158229,0.280924522409647,0.256100609619477,0.17230640686684,0.952587382566147,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0.882365676478062,0 | |phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0.700837921786577,1.29123323441576,1.12630977721333,2.57470978954193,1.71217968225505,1.19658238493005,0.684802919724823,0.611942816932982,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0.498703936075477,0.204169356262369,0.418531630736908,0,0,1.76469446409304,1.36609096991689,1.94204141212461,14.604030885167,13.6858857146345,7.70896359079063,0.782391344348039,0.436050312760893,0.439372365468944,0.58328969722285,1.25987779462826,0,0.671130424230945,1.45072428402269,0.336093799142464,2.31533492432352,1.43266719969378,2.57836046138721,0,0,0,2.71075625655306,2.66788438833342,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226714680320357,0.579728977403356,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0,0,0,0,0,3.030874574157,2.02687892380079,2.52762222507392,0,0.258937883647172,1.7813056687779,0.346970653532272,2.13125834818499,2.53677046981664,2.86373017049983,2.58695155698551,1.0053327306374,0.494389935468748,0.578397427679647,0.884610551949874,0.808834249737046,0,0.484875253135222,0,0.292780797011547,0,1.27728527604296,0.11981512450592,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.2562274405697,0.374806898238915,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,0.180062061461015,0,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.233530684734339,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.536825675041487,0,0,0,0.528901133327089,0,0.232236671860439,0,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,1.1948476395262,0.569003702859245,0.342745537829186,1.1270773567308,0.610953983535943,0.581857461502877,0.771494018793504,0.316182685621286,0,0,0.246794327843601,0,0.500535317148282,0.393117990226406,0.449724224769707,0.811440485554012,1.20588579876208,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0,0,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0,0.780534591431195,0.472905432318573,1.32878813789265,0.478364305972461,0.81931657357869,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0.827810238914197,0,0,1.3114795630134,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0.425820255624806,0,0.488660878060728,0.989820737835213,0,0.485561272309963,0,0.377210159511796,1.18120757152309,0.614870295887855,0,0,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,1.0591603543191,2.42581237860458,0.32977250588296,0.484393280087717,0.0603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,0.683471138605126,0,0.339956859987711,0,0.414599921413271,0.954670618015114,0,0.203319467126849,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.909188012978695,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,1.16243841129958,0.337912250981556,1.17357238645754,0.39061315453185,0,0,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0.198681354781265,0.360586348559907,0.295379054349154,0.504832249740738,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.350630706544707,0.226730383615211,0,0.269141569828427,0.167884616364078,1.15913756419314,1.87682475451182,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.565879024158229,0.280924522409647,0.256100609619477,0.17230640686684,0.952587382566147,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0.118635018124174,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,0,0.214871054048298,0.191288332068843,0.882365676478062,0 | ||
|short_description=p@chr15:77666718..77666746,- | |short_description=p@chr15:77666718..77666746,- | ||
}} | }} |
Latest revision as of 13:48, 5 August 2015
Short description: | p@chr15:77666718..77666746, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:77666718..77666746, - |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.07e-14 | 6 |
muscle cell | 3.07e-14 | 6 |
myoblast | 3.07e-14 | 6 |
mesodermal cell | 4.44e-12 | 7 |
multi-potent skeletal muscle stem cell | 3.38e-09 | 9 |
CD4-positive, alpha-beta T cell | 7.62e-09 | 8 |
smooth muscle cell | 2.15e-08 | 3 |
vascular associated smooth muscle cell | 2.15e-08 | 3 |
aortic smooth muscle cell | 2.15e-08 | 3 |
smooth muscle myoblast | 2.15e-08 | 3 |
duct epithelial cell | 8.39e-08 | 3 |
epithelial cell of tracheobronchial tree | 8.39e-08 | 3 |
branched duct epithelial cell | 8.39e-08 | 3 |
epithelial cell of lower respiratory tract | 8.39e-08 | 3 |
respiratory epithelial cell | 8.39e-08 | 3 |
tracheal epithelial cell | 8.39e-08 | 3 |
tracheoblast | 8.39e-08 | 3 |
mature alpha-beta T cell | 8.77e-08 | 9 |
alpha-beta T cell | 8.77e-08 | 9 |
immature T cell | 8.77e-08 | 9 |
mature T cell | 8.77e-08 | 9 |
immature alpha-beta T cell | 8.77e-08 | 9 |
cardiocyte | 1.79e-07 | 3 |
striated muscle cell | 1.79e-07 | 3 |
cardiac muscle cell | 1.79e-07 | 3 |
cardiac muscle myoblast | 1.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 3.41e-11 | 7 |
adrenal/interrenal gland | 3.41e-11 | 7 |
skeletal muscle tissue | 3.38e-09 | 9 |
striated muscle tissue | 3.38e-09 | 9 |
muscle tissue | 3.38e-09 | 9 |
multilaminar epithelium | 3.38e-09 | 9 |
epithelial vesicle | 3.38e-09 | 9 |
musculature | 3.38e-09 | 9 |
somite | 3.38e-09 | 9 |
myotome | 3.38e-09 | 9 |
presomitic mesoderm | 3.38e-09 | 9 |
presumptive segmental plate | 3.38e-09 | 9 |
dermomyotome | 3.38e-09 | 9 |
trunk paraxial mesoderm | 3.38e-09 | 9 |
intermediate mesoderm | 6.68e-09 | 14 |
smooth muscle tissue | 2.15e-08 | 3 |
blood vessel smooth muscle | 2.15e-08 | 3 |
arterial system smooth muscle | 2.15e-08 | 3 |
artery smooth muscle tissue | 2.15e-08 | 3 |
aorta smooth muscle tissue | 2.15e-08 | 3 |
musculature of body | 3.45e-08 | 10 |
trunk mesenchyme | 6.20e-08 | 45 |
trachea | 8.39e-08 | 3 |
respiratory airway | 8.39e-08 | 3 |
tracheobronchial tree | 8.39e-08 | 3 |
lower respiratory tract | 8.39e-08 | 3 |
dense mesenchyme tissue | 2.30e-07 | 11 |
paraxial mesoderm | 2.30e-07 | 11 |
presumptive paraxial mesoderm | 2.30e-07 | 11 |
trunk | 9.19e-07 | 90 |