FFCP PHASE1:Mm9::chr2:165151935..165151986,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140579 | |EntrezGene=140579 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BHL5,A2A5A7,A2A5A5 | |UniProt=Q8BHL5,A2A5A7,A2A5A5 | ||
|association_with_transcript=0bp_to_ENSMUST00000074046,ENSMUST00000094329,ENSMUST00000103088,ENSMUST00000128690,NM_080287,NM_207706,uc008nxk.1,uc008nxl.1,uc008nxn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000074046,ENSMUST00000094329,ENSMUST00000103088,ENSMUST00000128690,NM_080287,NM_207706,uc008nxk.1,uc008nxl.1,uc008nxn.1_5end | ||
|cluster_id=chr2:165151935..165151986,- | |||
|description=CAGE_peak_1_at_Elmo2_5end | |description=CAGE_peak_1_at_Elmo2_5end | ||
|id=chr2:165151935..165151986,- | |id=chr2:165151935..165151986,- | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-18!50;CL:0002319!3.33e-18!43;CL:0000221!1.90e-17!44;CL:0000133!1.90e-17!44;CL:0000393!8.22e-15!39;CL:0000211!8.22e-15!39;CL:0000540!2.59e-13!33;CL:0000047!2.59e-13!33;CL:0000031!2.59e-13!33;CL:0000404!2.59e-13!33;CL:0000117!2.12e-10!23;CL:0000337!2.12e-10!23 | |ontology_enrichment_celltype=CL:0000055!1.26e-18!50;CL:0002319!3.33e-18!43;CL:0000221!1.90e-17!44;CL:0000133!1.90e-17!44;CL:0000393!8.22e-15!39;CL:0000211!8.22e-15!39;CL:0000540!2.59e-13!33;CL:0000047!2.59e-13!33;CL:0000031!2.59e-13!33;CL:0000404!2.59e-13!33;CL:0000117!2.12e-10!23;CL:0000337!2.12e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.33e-18,43;CL:0000221,1.90e-17,44;CL:0000133,1.90e-17,44;CL:0000393,8.22e-15,39;CL:0000211,8.22e-15,39;CL:0000540,2.59e-13,33;CL:0000047,2.59e-13,33;CL:0000031,2.59e-13,33;CL:0000404,2.59e-13,33;CL:0000117,2.12e-10,23;CL:0000337,2.12e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.74e-32!73;UBERON:0005743!2.74e-32!73;UBERON:0000073!2.77e-32!75;UBERON:0001016!2.77e-32!75;UBERON:0004121!6.97e-26!102;UBERON:0000924!6.97e-26!102;UBERON:0006601!6.97e-26!102;UBERON:0001049!2.66e-22!52;UBERON:0005068!2.66e-22!52;UBERON:0006241!2.66e-22!52;UBERON:0007135!2.66e-22!52;UBERON:0000955!5.81e-22!50;UBERON:0006238!5.81e-22!50;UBERON:0002616!3.16e-21!49;UBERON:0002346!4.37e-21!71;UBERON:0003075!4.37e-21!71;UBERON:0007284!4.37e-21!71;UBERON:0000033!1.20e-19!63;UBERON:0002020!4.83e-18!34;UBERON:0003056!4.91e-17!49;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0003080!1.80e-16!40;UBERON:0002780!5.30e-16!39;UBERON:0001890!5.30e-16!39;UBERON:0006240!5.30e-16!39;UBERON:0000956!1.60e-12!21;UBERON:0001869!1.60e-12!21;UBERON:0000203!1.60e-12!21;UBERON:0002619!5.10e-11!17;UBERON:0000153!2.35e-10!94;UBERON:0007811!1.37e-09!86;UBERON:0000025!1.68e-07!114;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.74e-32!73;UBERON:0005743!2.74e-32!73;UBERON:0000073!2.77e-32!75;UBERON:0001016!2.77e-32!75;UBERON:0004121!6.97e-26!102;UBERON:0000924!6.97e-26!102;UBERON:0006601!6.97e-26!102;UBERON:0001049!2.66e-22!52;UBERON:0005068!2.66e-22!52;UBERON:0006241!2.66e-22!52;UBERON:0007135!2.66e-22!52;UBERON:0000955!5.81e-22!50;UBERON:0006238!5.81e-22!50;UBERON:0002616!3.16e-21!49;UBERON:0002346!4.37e-21!71;UBERON:0003075!4.37e-21!71;UBERON:0007284!4.37e-21!71;UBERON:0000033!1.20e-19!63;UBERON:0002020!4.83e-18!34;UBERON:0003056!4.91e-17!49;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0003080!1.80e-16!40;UBERON:0002780!5.30e-16!39;UBERON:0001890!5.30e-16!39;UBERON:0006240!5.30e-16!39;UBERON:0000956!1.60e-12!21;UBERON:0001869!1.60e-12!21;UBERON:0000203!1.60e-12!21;UBERON:0002619!5.10e-11!17;UBERON:0000153!2.35e-10!94;UBERON:0007811!1.37e-09!86;UBERON:0000025!1.68e-07!114;UBERON:0002021!3.19e-07!10;UBERON:0000411!3.19e-07!10;UBERON:0001950!3.19e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.74e-32,73;UBERON:0001016,2.77e-32,75;UBERON:0004121,1.33e-28,95;UBERON:0000924,1.33e-28,95;UBERON:0006601,1.33e-28,95;UBERON:0002346,2.17e-24,64;UBERON:0003075,2.17e-24,64;UBERON:0007284,2.17e-24,64;UBERON:0000073,5.40e-23,54;UBERON:0001049,2.66e-22,52;UBERON:0005068,2.66e-22,52;UBERON:0006241,2.66e-22,52;UBERON:0007135,2.66e-22,52;UBERON:0010371,1.23e-21,73;UBERON:0000955,8.14e-21,47;UBERON:0006238,8.14e-21,47;UBERON:0002616,4.34e-20,46;UBERON:0002020,4.83e-18,34;UBERON:0003056,4.91e-17,49;UBERON:0003528,1.51e-16,29;UBERON:0002791,1.51e-16,29;UBERON:0001893,1.51e-16,29;UBERON:0003080,1.80e-16,40;UBERON:0002780,5.30e-16,39;UBERON:0001890,5.30e-16,39;UBERON:0006240,5.30e-16,39;UBERON:0010314,2.61e-14,92;UBERON:0000956,1.60e-12,21;UBERON:0001869,1.60e-12,21;UBERON:0000203,1.60e-12,21;UBERON:0002619,5.10e-11,17;UBERON:0000025,1.68e-07,114;UBERON:0002021,3.19e-07,10;UBERON:0000411,3.19e-07,10;UBERON:0001950,3.19e-07,10 | |||
|phase1_expression=15.0539916278506,12.9120900826564,9.09998478779072,21.7774232140918,19.5349334679075,4.70061961353291,3.73780224952841,14.4618122254565,3.37892933164,4.68129052643987,4.45166717386313,4.22792442675283,13.353656934634,14.0746847894586,7.32841475994458,7.69406016081339,12.5921138063066,12.7762176970086,14.8083588294198,16.1268067683251,19.9001298953503,17.6737893137576,16.7167865048919,7.35965144849671,5.73523202667925,7.46501553349526,5.1691439539089,6.03319451520489,6.27077284206034,9.57714493087737,5.54326276638262,8.25539875497521,17.8368788399525,0,6.93243887403059,6.4831511689812,8.37094360675713,13.393012183581,28.9094077473806,24.0820922227947,9.99993529652724,13.6609096991689,16.5073520030592,26.4383317748712,31.122717884391,31.9371348761326,39.119567217402,66.7156978524166,60.6333864347142,80.4939782167533,44.3756956552399,51.7509231713898,8.72469551500229,12.3311564141929,11.4271891708438,21.0952737549477,19.4842739158355,28.3619650752593,39.4517098676216,28.0365219014177,39.2975470173831,41.000188380365,37.3503814366679,22.0475430733943,21.7550599764734,17.0515227587064,37.1504137042822,44.5693234173003,28.3072641602144,30.5113420629621,25.86997024622,28.8507494247842,31.3633328151291,31.1126630005983,45.1432168495893,45.041720543891,19.82085857989,41.1153228634304,38.5552398473171,37.9832508662958,42.7247295623253,35.4221091978597,44.3900968412196,36.0168070420275,33.6156145108982,21.8025153250514,26.4811326286331,31.1287074528252,16.6597625333005,24.8630432751324,14.2033599463822,7.74381489283248,1.3599426674155,3.2382191498269,2.59910566979068,4.03224198387602,9.83110940922263,17.2134625803838,14.8078022623635,17.666978725517,13.3801248787846,12.8326477414318,10.1922095882658,7.11066703153331,8.65964164044856,7.85415582972806,9.0994400102661,10.0481814152773,17.8667139716548,14.8442139064825,18.9099006175088,14.0054120023585,12.2226213545711,11.9070886036572,16.5800077061344,16.4623234641875,13.3485282576562,12.5801440520323,16.8076004870476,16.6619855445831,14.3546986999256,14.0613823409214,7.45567044872489,60.8984057784018,80.2180887095533,15.3274233125155,10.543730956521,10.7982491578813,8.00542430560307,35.6501721783478,45.292559679044,31.7905510845547,52.1472960576829,57.5359778993244,38.6485762880782,43.6428997652268,23.2193749578721,15.6752782968717,15.9215337813215,13.8891624885073,17.3060189140396,24.8294272788151,19.8068342785884,25.0169997607287,26.6022711681692,23.3166970918427,26.0490794276046,20.1788629176432,22.6346392579484,21.7471992192992,21.6419882721657,19.2892244536266,20.8535436919198,16.3678518265418,18.7261744131229,17.7140497468459,13.3420505589515,12.610047448621,14.2081749697796,11.8061690345236,12.4298811789981,12.244220179349,16.5721314909647,15.9379027715397,15.5809784016252,11.39416329277,15.0233104783787,16.5806786161381,20.4054213892716,12.6408947340903,14.1870416705248,13.7427988179812,12.953456802172,12.7496097822353,55.5165464209296,26.6522946062347,20.1555457620117,17.982638533121,19.6225190492415,17.4177503895329,17.0105048945163,18.3532007407242,16.9007313322101,21.1150444984941,22.7773949541366,30.469306623942,19.604146286421,19.6966907320739,24.7604390641283,17.0775687644302,13.400559092231,13.7407478545513,22.5704802134167,18.1655135049469,24.7957018480777,16.9030602111611,15.5161989734101,21.6719683461084,20.7415841767564,14.9086249459398,14.7578804170892,16.1650284737559,7.11486305009157,8.67594549723689,7.27268281918851,9.66907083254871,9.33156558387113,11.8176808278684,10.6942857748196,11.2201493605816,8.75530224585191,7.96228098245436,12.9391385874619,10.7920874823866,8.7370548472077,9.09283960609602,6.99649912735457,11.0962009913574,23.833161531492,18.9491411770485,21.3484119139054,17.6534889206196,18.7752198630802,24.1209010716215,21.9000149615133,32.7824528401102,27.4285150744772,35.2128856541552,37.7907801718244,22.4492741160561,30.7379267721294,34.5711250009813,9.04747703635634,17.4049818821987,12.2941068254759,8.27810238914197,30.1835109177049,38.093798142466,14.2623402477708,13.6334300690361,35.652428794037,36.3108032195874,26.9279247165999,26.7645053706858,28.2954316084641,25.7599643017838,36.4329631507405,31.5636326544217,36.3664755710802,63.9429419679396,16.4650498841592,24.9291845134157,26.7134613339865,20.6212653715669,14.6019652173959,12.624593080059,18.1394134178851,10.1846743068185,18.6040192514887,15.9866276930842,17.573123935439,17.4496190149203,16.7553767840819,9.48110273807448,12.6502330289999,20.6271086496374,13.2771446243977,16.5656206508805,19.2744438836304,20.3620183280013,15.9606210278046,22.652839835463,21.8850197400821,20.3991515906782,19.2430800612242,17.5820618816971,10.3648347085832,15.3344215235576,22.282090884035,23.4617277970526,17.9058516004705,21.6665987663481,18.9462543809403,34.1182555699338,14.1822831062218,18.7812049846532,15.7415348264255,11.6788443342908,10.5254555345189,11.2101304871196,9.00885678967433,9.37674730568509,8.01559848065658,6.68269432610579,20.0873355924021,18.7053909756701,17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| |phase1_expression=15.0539916278506,12.9120900826564,9.09998478779072,21.7774232140918,19.5349334679075,4.70061961353291,3.73780224952841,14.4618122254565,3.37892933164,4.68129052643987,4.45166717386313,4.22792442675283,13.353656934634,14.0746847894586,7.32841475994458,7.69406016081339,12.5921138063066,12.7762176970086,14.8083588294198,16.1268067683251,19.9001298953503,17.6737893137576,16.7167865048919,7.35965144849671,5.73523202667925,7.46501553349526,5.1691439539089,6.03319451520489,6.27077284206034,9.57714493087737,5.54326276638262,8.25539875497521,17.8368788399525,0,6.93243887403059,6.4831511689812,8.37094360675713,13.393012183581,28.9094077473806,24.0820922227947,9.99993529652724,13.6609096991689,16.5073520030592,26.4383317748712,31.122717884391,31.9371348761326,39.119567217402,66.7156978524166,60.6333864347142,80.4939782167533,44.3756956552399,51.7509231713898,8.72469551500229,12.3311564141929,11.4271891708438,21.0952737549477,19.4842739158355,28.3619650752593,39.4517098676216,28.0365219014177,39.2975470173831,41.000188380365,37.3503814366679,22.0475430733943,21.7550599764734,17.0515227587064,37.1504137042822,44.5693234173003,28.3072641602144,30.5113420629621,25.86997024622,28.8507494247842,31.3633328151291,31.1126630005983,45.1432168495893,45.041720543891,19.82085857989,41.1153228634304,38.5552398473171,37.9832508662958,42.7247295623253,35.4221091978597,44.3900968412196,36.0168070420275,33.6156145108982,21.8025153250514,26.4811326286331,31.1287074528252,16.6597625333005,24.8630432751324,14.2033599463822,7.74381489283248,1.3599426674155,3.2382191498269,2.59910566979068,4.03224198387602,9.83110940922263,17.2134625803838,14.8078022623635,17.666978725517,13.3801248787846,12.8326477414318,10.1922095882658,7.11066703153331,8.65964164044856,7.85415582972806,9.0994400102661,10.0481814152773,17.8667139716548,14.8442139064825,18.9099006175088,14.0054120023585,12.2226213545711,11.9070886036572,16.5800077061344,16.4623234641875,13.3485282576562,12.5801440520323,16.8076004870476,16.6619855445831,14.3546986999256,14.0613823409214,7.45567044872489,60.8984057784018,80.2180887095533,15.3274233125155,10.543730956521,10.7982491578813,8.00542430560307,35.6501721783478,45.292559679044,31.7905510845547,52.1472960576829,57.5359778993244,38.6485762880782,43.6428997652268,23.2193749578721,15.6752782968717,15.9215337813215,13.8891624885073,17.3060189140396,24.8294272788151,19.8068342785884,25.0169997607287,26.6022711681692,23.3166970918427,26.0490794276046,20.1788629176432,22.6346392579484,21.7471992192992,21.6419882721657,19.2892244536266,20.8535436919198,16.3678518265418,18.7261744131229,17.7140497468459,13.3420505589515,12.610047448621,14.2081749697796,11.8061690345236,12.4298811789981,12.244220179349,16.5721314909647,15.9379027715397,15.5809784016252,11.39416329277,15.0233104783787,16.5806786161381,20.4054213892716,12.6408947340903,14.1870416705248,13.7427988179812,12.953456802172,12.7496097822353,55.5165464209296,26.6522946062347,20.1555457620117,17.982638533121,19.6225190492415,17.4177503895329,17.0105048945163,18.3532007407242,16.9007313322101,21.1150444984941,22.7773949541366,30.469306623942,19.604146286421,19.6966907320739,24.7604390641283,17.0775687644302,13.400559092231,13.7407478545513,22.5704802134167,18.1655135049469,24.7957018480777,16.9030602111611,15.5161989734101,21.6719683461084,20.7415841767564,14.9086249459398,14.7578804170892,16.1650284737559,7.11486305009157,8.67594549723689,7.27268281918851,9.66907083254871,9.33156558387113,11.8176808278684,10.6942857748196,11.2201493605816,8.75530224585191,7.96228098245436,12.9391385874619,10.7920874823866,8.7370548472077,9.09283960609602,6.99649912735457,11.0962009913574,23.833161531492,18.9491411770485,21.3484119139054,17.6534889206196,18.7752198630802,24.1209010716215,21.9000149615133,32.7824528401102,27.4285150744772,35.2128856541552,37.7907801718244,22.4492741160561,30.7379267721294,34.5711250009813,9.04747703635634,17.4049818821987,12.2941068254759,8.27810238914197,30.1835109177049,38.093798142466,14.2623402477708,13.6334300690361,35.652428794037,36.3108032195874,26.9279247165999,26.7645053706858,28.2954316084641,25.7599643017838,36.4329631507405,31.5636326544217,36.3664755710802,63.9429419679396,16.4650498841592,24.9291845134157,26.7134613339865,20.6212653715669,14.6019652173959,12.624593080059,18.1394134178851,10.1846743068185,18.6040192514887,15.9866276930842,17.573123935439,17.4496190149203,16.7553767840819,9.48110273807448,12.6502330289999,20.6271086496374,13.2771446243977,16.5656206508805,19.2744438836304,20.3620183280013,15.9606210278046,22.652839835463,21.8850197400821,20.3991515906782,19.2430800612242,17.5820618816971,10.3648347085832,15.3344215235576,22.282090884035,23.4617277970526,17.9058516004705,21.6665987663481,18.9462543809403,34.1182555699338,14.1822831062218,18.7812049846532,15.7415348264255,11.6788443342908,10.5254555345189,11.2101304871196,9.00885678967433,9.37674730568509,8.01559848065658,6.68269432610579,20.0873355924021,18.7053909756701,17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| ||
|short_description=p1@Elmo2 | |short_description=p1@Elmo2 | ||
}} | }} |
Latest revision as of 04:07, 26 September 2015
Short description: | p1@Elmo2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Elmo2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000074046, ENSMUST00000094329, ENSMUST00000103088, ENSMUST00000128690, NM_080287, NM_207706, uc008nxk.1, uc008nxl.1, uc008nxn.1_5end |
EntrezGene: | Elmo2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.33e-18 | 43 |
ectodermal cell | 1.90e-17 | 44 |
neurectodermal cell | 1.90e-17 | 44 |
electrically responsive cell | 8.22e-15 | 39 |
electrically active cell | 8.22e-15 | 39 |
neuron | 2.59e-13 | 33 |
neuronal stem cell | 2.59e-13 | 33 |
neuroblast | 2.59e-13 | 33 |
electrically signaling cell | 2.59e-13 | 33 |
CNS neuron (sensu Vertebrata) | 2.12e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.12e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.74e-32 | 73 |
nervous system | 2.77e-32 | 75 |
ectoderm-derived structure | 1.33e-28 | 95 |
ectoderm | 1.33e-28 | 95 |
presumptive ectoderm | 1.33e-28 | 95 |
neurectoderm | 2.17e-24 | 64 |
neural plate | 2.17e-24 | 64 |
presumptive neural plate | 2.17e-24 | 64 |
regional part of nervous system | 5.40e-23 | 54 |
neural tube | 2.66e-22 | 52 |
neural rod | 2.66e-22 | 52 |
future spinal cord | 2.66e-22 | 52 |
neural keel | 2.66e-22 | 52 |
ecto-epithelium | 1.23e-21 | 73 |
brain | 8.14e-21 | 47 |
future brain | 8.14e-21 | 47 |
regional part of brain | 4.34e-20 | 46 |
gray matter | 4.83e-18 | 34 |
pre-chordal neural plate | 4.91e-17 | 49 |
brain grey matter | 1.51e-16 | 29 |
regional part of telencephalon | 1.51e-16 | 29 |
telencephalon | 1.51e-16 | 29 |
anterior neural tube | 1.80e-16 | 40 |
regional part of forebrain | 5.30e-16 | 39 |
forebrain | 5.30e-16 | 39 |
future forebrain | 5.30e-16 | 39 |
structure with developmental contribution from neural crest | 2.61e-14 | 92 |
cerebral cortex | 1.60e-12 | 21 |
cerebral hemisphere | 1.60e-12 | 21 |
pallium | 1.60e-12 | 21 |
regional part of cerebral cortex | 5.10e-11 | 17 |
tube | 1.68e-07 | 114 |
occipital lobe | 3.19e-07 | 10 |
visual cortex | 3.19e-07 | 10 |
neocortex | 3.19e-07 | 10 |