FFCP PHASE1:Hg19::chr2:182756497..182756540,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:182756497..182756540,+
|short_description=p3@SSFA2
|description=CAGE_peak_3_at_SSFA2_5end
|association_with_transcript=-19bp_to_ENST00000480753_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6744 | |EntrezGene=6744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11319 | |HGNC=11319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENST00000480753_5end | |||
|cluster_id=chr2:182756497..182756540,+ | |||
|description=CAGE_peak_3_at_SSFA2_5end | |||
|id=chr2:182756497..182756540,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.53e-11!42;CL:0000766!2.08e-10!76;CL:0000860!4.64e-10!45;CL:0000557!1.32e-07!71;CL:0000839!5.54e-07!70;CL:0000738!6.13e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.08e-11;33!CL:0002057;5.08e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.42e-11,42;CL:0002057,2.42e-11,42;CL:0000766,3.27e-11,72;CL:0000473,2.81e-08,48;CL:0000234,2.81e-08,48;CL:0000557,3.03e-08,67;CL:0000839,1.40e-07,66;CL:0000738,3.33e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-33!115;UBERON:0001049!1.12e-18!57;UBERON:0005068!1.12e-18!57;UBERON:0006241!1.12e-18!57;UBERON:0007135!1.12e-18!57;UBERON:0002780!5.79e-15!41;UBERON:0001890!5.79e-15!41;UBERON:0006240!5.79e-15!41;UBERON:0003080!9.32e-15!42;UBERON:0003075!1.50e-14!86;UBERON:0007284!1.50e-14!86;UBERON:0002346!2.32e-14!90;UBERON:0002616!2.47e-14!59;UBERON:0000955!2.69e-13!69;UBERON:0006238!2.69e-13!69;UBERON:0000073!2.81e-13!94;UBERON:0001016!2.81e-13!94;UBERON:0005743!2.89e-13!86;UBERON:0001017!8.23e-13!82;UBERON:0000153!4.58e-12!129;UBERON:0007811!4.58e-12!129;UBERON:0000033!2.00e-11!123;UBERON:0002020!2.25e-11!34;UBERON:0003528!2.25e-11!34;UBERON:0001893!2.40e-11!34;UBERON:0003056!2.85e-11!61;UBERON:0002791!7.66e-11!33;UBERON:0001869!3.45e-10!32;UBERON:0000924!4.53e-09!173;UBERON:0006601!4.53e-09!173;UBERON:0004121!5.14e-09!169;UBERON:0002390!5.28e-08!102;UBERON:0003061!5.28e-08!102;UBERON:0000956!2.03e-07!25;UBERON:0000203!2.03e-07!25;UBERON:0002193!4.92e-07!112;UBERON:0002619!5.50e-07!22;UBERON:0000062!6.54e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.94e-11;53!UBERON:0002616;3.94e-11;53!UBERON:0002780;5.65e-11;41!UBERON:0001890;5.65e-11;41!UBERON:0007023;6.94e-10;114!UBERON:0001893;8.07e-10;34!UBERON:0003528;1.53e-09;34!UBERON:0002020;1.53e-09;34!UBERON:0002791;2.94e-09;32!UBERON:0001869;3.47e-09;32!UBERON:0001017;2.05e-07;75!UBERON:0000956;2.27e-07;25!UBERON:0000203;2.27e-07;25!UBERON:0000955;4.08e-07;68!UBERON:0002619;4.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.75e-32,114;UBERON:0001049,4.00e-19,56;UBERON:0005068,4.00e-19,56;UBERON:0006241,4.00e-19,56;UBERON:0007135,4.00e-19,56;UBERON:0000073,7.09e-18,53;UBERON:0002616,7.09e-18,53;UBERON:0002780,3.56e-15,41;UBERON:0001890,3.56e-15,41;UBERON:0003080,3.56e-15,41;UBERON:0006240,3.56e-15,41;UBERON:0003075,5.78e-15,82;UBERON:0007284,5.78e-15,82;UBERON:0002346,9.67e-15,86;UBERON:0000955,1.16e-13,68;UBERON:0006238,1.16e-13,68;UBERON:0001017,3.82e-13,81;UBERON:0001016,3.99e-13,89;UBERON:0003056,5.00e-12,61;UBERON:0003528,1.44e-11,34;UBERON:0002020,1.44e-11,34;UBERON:0001893,1.54e-11,34;UBERON:0010314,2.76e-11,132;UBERON:0002791,1.87e-10,32;UBERON:0001869,2.25e-10,32;UBERON:0010371,6.60e-09,104;UBERON:0004121,8.25e-09,171;UBERON:0000924,8.25e-09,171;UBERON:0006601,8.25e-09,171;UBERON:0002390,1.89e-08,98;UBERON:0003061,1.89e-08,98;UBERON:0000956,1.38e-07,25;UBERON:0000203,1.38e-07,25;UBERON:0002193,2.44e-07,108;UBERON:0002619,3.71e-07,22 | |||
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| ||
|short_description=p3@SSFA2 | |||
}} | }} |
Latest revision as of 21:33, 18 September 2015
Short description: | p3@SSFA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SSFA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENST00000480753_5end |
EntrezGene: | SSFA2 |
HGNC: | 11319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.42e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-11 | 42 |
myeloid leukocyte | 3.27e-11 | 72 |
defensive cell | 2.81e-08 | 48 |
phagocyte | 2.81e-08 | 48 |
granulocyte monocyte progenitor cell | 3.03e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.40e-07 | 66 |
leukocyte | 3.33e-07 | 136 |