FFCP PHASE1:Mm9::chr15:41318905..41318908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:41318905..41318908,+ | |||
|description=CAGE_peak_at_chr15:41318905..41318908,+ | |description=CAGE_peak_at_chr15:41318905..41318908,+ | ||
|id=chr15:41318905..41318908,+ | |id=chr15:41318905..41318908,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!6.55e-14!10;UBERON:0000411!6.55e-14!10;UBERON:0001950!6.55e-14!10;UBERON:0002619!2.11e-08!17;UBERON:0000955!3.48e-08!50;UBERON:0006238!3.48e-08!50;UBERON:0000033!9.10e-08!63;UBERON:0000073!1.61e-07!75;UBERON:0001016!1.61e-07!75;UBERON:0002616!1.66e-07!49;UBERON:0000956!2.02e-07!21;UBERON:0001869!2.02e-07!21;UBERON:0000203!2.02e-07!21;UBERON:0001017!2.43e-07!73;UBERON:0005743!2.43e-07!73;UBERON:0002346!3.85e-07!71;UBERON:0003075!3.85e-07!71;UBERON:0007284!3.85e-07!71;UBERON:0003056!4.50e-07!49;UBERON:0004121!7.67e-07!102;UBERON:0000924!7.67e-07!102;UBERON:0006601!7.67e-07!102 | |ontology_enrichment_uberon=UBERON:0002021!6.55e-14!10;UBERON:0000411!6.55e-14!10;UBERON:0001950!6.55e-14!10;UBERON:0002619!2.11e-08!17;UBERON:0000955!3.48e-08!50;UBERON:0006238!3.48e-08!50;UBERON:0000033!9.10e-08!63;UBERON:0000073!1.61e-07!75;UBERON:0001016!1.61e-07!75;UBERON:0002616!1.66e-07!49;UBERON:0000956!2.02e-07!21;UBERON:0001869!2.02e-07!21;UBERON:0000203!2.02e-07!21;UBERON:0001017!2.43e-07!73;UBERON:0005743!2.43e-07!73;UBERON:0002346!3.85e-07!71;UBERON:0003075!3.85e-07!71;UBERON:0007284!3.85e-07!71;UBERON:0003056!4.50e-07!49;UBERON:0004121!7.67e-07!102;UBERON:0000924!7.67e-07!102;UBERON:0006601!7.67e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.22e-39,10;UBERON:0000411,4.22e-39,10;UBERON:0001950,4.22e-39,10;UBERON:0002619,6.21e-23,17;UBERON:0000956,1.61e-18,21;UBERON:0001869,1.61e-18,21;UBERON:0000203,1.61e-18,21;UBERON:0003528,2.60e-17,29;UBERON:0002791,2.60e-17,29;UBERON:0001893,2.60e-17,29;UBERON:0002020,1.07e-14,34;UBERON:0002780,9.42e-13,39;UBERON:0001890,9.42e-13,39;UBERON:0006240,9.42e-13,39;UBERON:0003080,2.02e-12,40;UBERON:0000073,2.00e-11,54;UBERON:0002616,9.86e-11,46;UBERON:0000955,1.71e-10,47;UBERON:0006238,1.71e-10,47;UBERON:0001017,2.52e-10,73;UBERON:0003056,4.84e-10,49;UBERON:0001016,4.97e-10,75;UBERON:0001049,1.98e-09,52;UBERON:0005068,1.98e-09,52;UBERON:0006241,1.98e-09,52;UBERON:0007135,1.98e-09,52;UBERON:0001851,4.39e-09,1;UBERON:0005889,4.39e-09,1;UBERON:0004121,9.51e-08,95;UBERON:0000924,9.51e-08,95;UBERON:0006601,9.51e-08,95;UBERON:0002346,1.50e-07,64;UBERON:0003075,1.50e-07,64;UBERON:0007284,1.50e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0.61119299110724,0,0.142371680799103,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.299581278809645,1.37250180845588,0,0.347648640384553,1.27857728665165,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.38097570952153,1.14579102687879,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,7.25027854374727,6.21312374102184,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0.61119299110724,0,0.142371680799103,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,0.628340120440365,0,0,0,0,0.299581278809645,1.37250180845588,0,0.347648640384553,1.27857728665165,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0.238968797952552,0,0.566153061577665,0,1.75353514746787,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.58678619322877,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.302478555410522,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.38097570952153,1.14579102687879,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,7.25027854374727,6.21312374102184,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr15:41318905..41318908,+ | |short_description=p@chr15:41318905..41318908,+ | ||
}} | }} |
Latest revision as of 06:10, 5 August 2015
Short description: | p@chr15:41318905..41318908, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:41318905..41318908, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.22e-39 | 10 |
visual cortex | 4.22e-39 | 10 |
neocortex | 4.22e-39 | 10 |
regional part of cerebral cortex | 6.21e-23 | 17 |
cerebral cortex | 1.61e-18 | 21 |
cerebral hemisphere | 1.61e-18 | 21 |
pallium | 1.61e-18 | 21 |
brain grey matter | 2.60e-17 | 29 |
regional part of telencephalon | 2.60e-17 | 29 |
telencephalon | 2.60e-17 | 29 |
gray matter | 1.07e-14 | 34 |
regional part of forebrain | 9.42e-13 | 39 |
forebrain | 9.42e-13 | 39 |
future forebrain | 9.42e-13 | 39 |
anterior neural tube | 2.02e-12 | 40 |
regional part of nervous system | 2.00e-11 | 54 |
regional part of brain | 9.86e-11 | 46 |
brain | 1.71e-10 | 47 |
future brain | 1.71e-10 | 47 |
central nervous system | 2.52e-10 | 73 |
pre-chordal neural plate | 4.84e-10 | 49 |
nervous system | 4.97e-10 | 75 |
neural tube | 1.98e-09 | 52 |
neural rod | 1.98e-09 | 52 |
future spinal cord | 1.98e-09 | 52 |
neural keel | 1.98e-09 | 52 |
cortex | 4.39e-09 | 1 |
zygote cortex | 4.39e-09 | 1 |
ectoderm-derived structure | 9.51e-08 | 95 |
ectoderm | 9.51e-08 | 95 |
presumptive ectoderm | 9.51e-08 | 95 |
neurectoderm | 1.50e-07 | 64 |
neural plate | 1.50e-07 | 64 |
presumptive neural plate | 1.50e-07 | 64 |