FFCP PHASE1:Mm9::chr3:84063580..84063621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80890 | |EntrezGene=80890 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2382 | |MCL_coexpression_id=2382 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UHH4 | |UniProt=Q3UHH4 | ||
|association_with_transcript=78bp_to_uc008ppx.2_5end | |association_with_transcript=78bp_to_uc008ppx.2_5end | ||
|cluster_id=chr3:84063580..84063621,- | |||
|description=CAGE_peak_3_at_Trim2_5end | |description=CAGE_peak_3_at_Trim2_5end | ||
|id=chr3:84063580..84063621,- | |id=chr3:84063580..84063621,- | ||
|ontology_enrichment_celltype=CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0000540!6.80e-10!33;CL:0000047!6.80e-10!33;CL:0000031!6.80e-10!33;CL:0000404!6.80e-10!33;CL:0002321!7.60e-10!70;CL:0000220!7.60e-10!70;CL:0000055!3.12e-09!50;CL:0002319!3.88e-08!43;CL:0000221!4.94e-08!44;CL:0000133!4.94e-08!44;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23 | |ontology_enrichment_celltype=CL:0000393!1.28e-10!39;CL:0000211!1.28e-10!39;CL:0000540!6.80e-10!33;CL:0000047!6.80e-10!33;CL:0000031!6.80e-10!33;CL:0000404!6.80e-10!33;CL:0002321!7.60e-10!70;CL:0000220!7.60e-10!70;CL:0000055!3.12e-09!50;CL:0002319!3.88e-08!43;CL:0000221!4.94e-08!44;CL:0000133!4.94e-08!44;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.74e-11,39;CL:0000211,9.74e-11,39;CL:0000540,3.27e-10,33;CL:0000047,3.27e-10,33;CL:0000031,3.27e-10,33;CL:0000404,3.27e-10,33;CL:0002321,7.99e-10,70;CL:0002319,1.96e-08,43;CL:0000221,2.52e-08,44;CL:0000133,2.52e-08,44;CL:0000117,8.85e-08,23;CL:0000337,8.85e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.56e-22!102;UBERON:0000924!1.56e-22!102;UBERON:0006601!1.56e-22!102;UBERON:0000073!1.73e-17!75;UBERON:0001016!1.73e-17!75;UBERON:0001017!3.58e-17!73;UBERON:0005743!3.58e-17!73;UBERON:0002346!5.95e-16!71;UBERON:0003075!5.95e-16!71;UBERON:0007284!5.95e-16!71;UBERON:0002020!1.35e-13!34;UBERON:0001049!8.53e-13!52;UBERON:0005068!8.53e-13!52;UBERON:0006241!8.53e-13!52;UBERON:0007135!8.53e-13!52;UBERON:0000033!8.95e-13!63;UBERON:0000955!8.97e-13!50;UBERON:0006238!8.97e-13!50;UBERON:0002616!3.40e-12!49;UBERON:0002791!6.05e-12!29;UBERON:0003528!6.05e-12!29;UBERON:0001893!6.05e-12!29;UBERON:0000956!1.26e-10!21;UBERON:0001869!1.26e-10!21;UBERON:0000203!1.26e-10!21;UBERON:0003056!1.02e-09!49;UBERON:0003080!1.34e-09!40;UBERON:0002780!4.31e-09!39;UBERON:0001890!4.31e-09!39;UBERON:0006240!4.31e-09!39;UBERON:0002619!8.43e-09!17;UBERON:0007023!1.92e-07!51;UBERON:0002021!2.43e-07!10;UBERON:0000411!2.43e-07!10;UBERON:0001950!2.43e-07!10;UBERON:0004111!3.31e-07!122 | |ontology_enrichment_uberon=UBERON:0004121!1.56e-22!102;UBERON:0000924!1.56e-22!102;UBERON:0006601!1.56e-22!102;UBERON:0000073!1.73e-17!75;UBERON:0001016!1.73e-17!75;UBERON:0001017!3.58e-17!73;UBERON:0005743!3.58e-17!73;UBERON:0002346!5.95e-16!71;UBERON:0003075!5.95e-16!71;UBERON:0007284!5.95e-16!71;UBERON:0002020!1.35e-13!34;UBERON:0001049!8.53e-13!52;UBERON:0005068!8.53e-13!52;UBERON:0006241!8.53e-13!52;UBERON:0007135!8.53e-13!52;UBERON:0000033!8.95e-13!63;UBERON:0000955!8.97e-13!50;UBERON:0006238!8.97e-13!50;UBERON:0002616!3.40e-12!49;UBERON:0002791!6.05e-12!29;UBERON:0003528!6.05e-12!29;UBERON:0001893!6.05e-12!29;UBERON:0000956!1.26e-10!21;UBERON:0001869!1.26e-10!21;UBERON:0000203!1.26e-10!21;UBERON:0003056!1.02e-09!49;UBERON:0003080!1.34e-09!40;UBERON:0002780!4.31e-09!39;UBERON:0001890!4.31e-09!39;UBERON:0006240!4.31e-09!39;UBERON:0002619!8.43e-09!17;UBERON:0007023!1.92e-07!51;UBERON:0002021!2.43e-07!10;UBERON:0000411!2.43e-07!10;UBERON:0001950!2.43e-07!10;UBERON:0004111!3.31e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.77e-19,95;UBERON:0000924,1.77e-19,95;UBERON:0006601,1.77e-19,95;UBERON:0001016,1.34e-17,75;UBERON:0001017,2.86e-17,73;UBERON:0010371,2.73e-15,73;UBERON:0002020,4.70e-14,34;UBERON:0000073,5.17e-14,54;UBERON:0002346,2.35e-13,64;UBERON:0003075,2.35e-13,64;UBERON:0007284,2.35e-13,64;UBERON:0001049,7.22e-13,52;UBERON:0005068,7.22e-13,52;UBERON:0006241,7.22e-13,52;UBERON:0007135,7.22e-13,52;UBERON:0003528,2.43e-12,29;UBERON:0002791,2.43e-12,29;UBERON:0001893,2.43e-12,29;UBERON:0000955,4.20e-11,47;UBERON:0006238,4.20e-11,47;UBERON:0000956,5.68e-11,21;UBERON:0001869,5.68e-11,21;UBERON:0000203,5.68e-11,21;UBERON:0002616,1.56e-10,46;UBERON:0003056,2.14e-09,49;UBERON:0003080,2.14e-09,40;UBERON:0002619,4.45e-09,17;UBERON:0002780,7.01e-09,39;UBERON:0001890,7.01e-09,39;UBERON:0006240,7.01e-09,39;UBERON:0010314,9.17e-09,92;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10;UBERON:0007023,1.88e-07,51 | |||
|phase1_expression=3.36312578920067,5.93258192986914,9.55498402718026,8.77146212789807,17.0304548181758,1.6787927191189,3.27057696833736,0.129123323441576,3.09735188733667,1.17032263160997,0,0.239316476986009,0,0.262261207256992,0.333109761815663,0,0,0.157731082679119,0,0,4.59233766815777,0.0992909512008853,0,2.23989391910769,2.75291137280604,4.59385571292016,4.73838195774982,3.01659725760245,7.60093677825496,4.28451220591882,3.10422714917427,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,7.80560271448579,7.90740063512214,9.72797786456912,0,1.74420125104357,6.37089929929968,5.63846707315422,1.39986421625363,1.43752564364972,0.167782606057736,0,0,3.34437266846731,0.85960031981627,5.15672092277442,6.67644320836673,4.23192783417626,5.07065122804943,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,2.68952813725088,10.3689612308478,8.10035629990144,10.5162480675691,6.85562362569129,5.96345060569357,4.5321595709533,5.271500906003,2.75765635983006,28.6301290598411,18.2592893461818,19.0472101237742,3.29715719325485,3.29355516968675,5.2091337055676,21.217907924105,4.50210088025344,13.5990440521361,10.606629077052,7.68807076315156,7.64237727883732,3.86203585999239,4.91215140694106,3.47837386442013,6.0229671388697,17.6792546764015,7.55584468292944,15.5946340187441,4.03224198387602,3.93244376368905,3.74946709671727,2.33807404142582,3.5333957451034,2.53518155598025,6.41632387071589,2.54805239706646,7.11066703153331,1.73192832808971,3.04031838570118,0.505524445014783,5.1382745873577,3.10725460376606,7.42210695324124,2.25530924795977,8.8294988710521,12.4532368518272,12.2085338847624,17.1679512418129,14.9543243682314,1.48316980640624,3.61498392299779,0.884610551949874,1.7794353494215,1.76673214768315,0.969750506270444,5.59175283654366,13.7606974595427,14.8707161837553,4.59822699375465,0.11981512450592,0,0.254140454146129,17.3757141709594,6.40500843946077,4.02093926761166,31.6360262749943,27.3615539343454,17.0386196538839,17.1975738851823,3.46253837091075,5.47390670684409,8.84529654517861,3.36706969418358,0.780722657776222,2.5289231487682,4.68161537493908,2.71268672104287,5.30684693380357,3.45907044769094,4.12287588062807,6.20888089773638,0.215567992932842,0.756424320671277,1.23165786914764,1.7535658594206,4.17070873838397,4.52727816478817,1.4404749548556,0.398068533636986,0,0,0,0,0.469052119962192,0.720248245844059,0.473489471170421,0.787056926989615,0.308534225774757,0,1.3413670069981,1.05088808130453,0.987359099480883,0.492502392237286,1.54030738137126,0.877199924551994,1.75640092232841,2.28150911892632,45.4226288898515,19.7576855768226,17.1817767151575,8.19796756656987,0.639864751605702,1.16118335930219,1.03093969057675,0.605050573870028,0.444756087689741,1.14135375667535,4.74529061544512,2.30578536613615,4.27269854960458,2.78539060857611,2.14460495831032,7.19055526923377,4.97117514711797,8.76221602319216,0.948339504765408,1.5994791765362,1.1270773567308,1.4255592949172,1.74557238450863,4.34842083319975,5.1853960441891,7.38050739898011,8.00693511991011,8.26760998276064,2.37162101669719,0,0.196558995113203,0,0,0.241177159752417,0,0,0.648540907100142,0.823684239564244,2.87536413054709,2.60498663367952,8.42501717409313,11.8712072635143,12.7372163600558,11.5786445127208,2.40179147216586,0.757965647081939,0.651859905768103,0.339490171550376,0.469380496577004,0.837531287209079,1.6663054862021,3.90267295715598,1.89162172927429,2.6575762757853,3.34855014180723,1.80249646187312,1.55416483679306,1.73578870297814,0,0,4.42587845717133,4.69092468718045,27.9358026578758,24.4972424977705,14.5902101385241,1.00988370881749,3.78609863299508,3.51394869866975,7.32439552291516,12.4263774935327,14.0363164671908,17.5507449089076,6.47697122679831,4.9683495844923,4.74345333535828,24.4204200480573,4.11626247103979,1.06839362200353,3.09485222771795,4.45419332025846,0,0,0,0.188605079755898,0,0.614870295887855,1.80899805217755,1.45413491791002,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,6.46835250932197,1.62054984628179,0.258717367565509,0.214337035031592,0.532020700926821,0.891844088010353,0.658196082408484,1.8267896946876,0.938686832254841,0.21183207086382,13.4522322813527,9.23363016472288,5.16686165426898,4.16159182004275,7.63983001620073,12.8029901801148,8.16146342563582,32.8202784558602,0.170870880797853,0.82554747185289,0,0.376736914009382,0.27338845544205,0.228778173206523,1.69978429993855,0.979660166265606,0.829199842826543,6.68269432610579,0.158167996790568,0.813277868507395,3.24016022465404,3.13632444021703,2.18362563746178,3.50647300600534,5.37247462214684,5.23511883968059,4.40690909192096,13.6694648879124,0,0.299033092087958,0.496375471371293,1.36115831840833,0.904118764344118,0,1.17357238645754,0.911430693907651,0.524296722128554,0,1.15212002503146,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.537080087002444,0,0.120195449519969,0.147689527174577,0.706765149637033,0,0.100826185136841,0.194915761479505,0,0,0.6801911508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| ||
|short_description=p3@Trim2 | |short_description=p3@Trim2 | ||
}} | }} |
Latest revision as of 18:28, 25 September 2015
Short description: | p3@Trim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2382 |
Association with transcript: | 78bp_to_uc008ppx.2_5end |
EntrezGene: | Trim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.74e-11 | 39 |
electrically active cell | 9.74e-11 | 39 |
neuron | 3.27e-10 | 33 |
neuronal stem cell | 3.27e-10 | 33 |
neuroblast | 3.27e-10 | 33 |
electrically signaling cell | 3.27e-10 | 33 |
embryonic cell | 7.99e-10 | 70 |
neural cell | 1.96e-08 | 43 |
ectodermal cell | 2.52e-08 | 44 |
neurectodermal cell | 2.52e-08 | 44 |
CNS neuron (sensu Vertebrata) | 8.85e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.85e-08 | 23 |