FFCP PHASE1:Hg19::chr2:216264013..216264051,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216264013..216264051,+
|short_description=p@chr2:216264013..216264051,+
|description=CAGE_peak_at_chr2:216264013..216264051,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:216264013..216264051,+ | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216264013..216264051,+ | |||
|id=chr2:216264013..216264051,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.08e-23!180;CL:0000057!1.25e-20!75;CL:0002371!8.58e-18!591;CL:0000144!2.13e-16!625;CL:0000548!8.89e-12!679;CL:0000004!8.89e-12!679;CL:0000255!8.89e-12!679;CL:0000012!2.37e-11!682;CL:0002620!7.54e-11!23;CL:0000048!2.93e-10!430;CL:0000723!4.56e-10!436;CL:0000680!4.64e-10!57;CL:0000056!4.64e-10!57;CL:0000355!4.64e-10!57;CL:0000034!8.53e-10!444;CL:0000183!3.06e-09!59;CL:0000187!7.17e-09!54;CL:0002570!2.50e-07!8;CL:0002334!3.58e-07!12;CL:0000393!7.96e-07!60;CL:0000211!7.96e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.11e-12;55!CL:0000723;2.90e-12;61!CL:0002620;4.08e-11;23!CL:0002570;1.82e-10;8!CL:0000048;2.71e-10;58!CL:0002334;3.91e-09;12!CL:0000034;5.18e-09;69!CL:0002494;1.37e-07;16!CL:0000188;1.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.54e-18,76;CL:0000048,2.99e-15,427;CL:0000723,4.76e-15,433;CL:0000034,3.82e-14,441;CL:0002620,3.08e-11,23;CL:0002570,2.23e-10,8;CL:0000680,2.56e-10,58;CL:0000056,2.56e-10,58;CL:0000355,2.56e-10,58;CL:0002320,5.32e-10,361;CL:0000187,1.95e-09,55;CL:0002334,3.24e-09,12;CL:0000134,4.68e-08,354;CL:0000393,9.16e-08,61;CL:0000211,9.16e-08,61;CL:0000188,1.08e-07,9;CL:0002494,1.09e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.73e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.31e-13!83;UBERON:0002329!3.31e-13!83;UBERON:0003077!3.31e-13!83;UBERON:0003059!3.31e-13!83;UBERON:0007282!3.31e-13!83;UBERON:0009618!3.31e-13!83;UBERON:0007285!3.31e-13!83;UBERON:0004290!2.30e-11!70;UBERON:0005256!2.12e-10!143;UBERON:0002199!2.19e-10!45;UBERON:0002416!2.19e-10!45;UBERON:0000486!2.94e-10!82;UBERON:0003102!4.97e-09!95;UBERON:0001134!1.55e-08!61;UBERON:0002036!1.55e-08!61;UBERON:0003082!1.55e-08!61;UBERON:0002385!1.78e-08!63;UBERON:0001015!1.78e-08!63;UBERON:0000383!1.78e-08!63;UBERON:0004923!4.40e-08!57;UBERON:0002097!5.22e-08!40;UBERON:0001013!1.39e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.70e-10;14!UBERON:0002199;4.74e-08;46!UBERON:0002416;4.74e-08;46!UBERON:0002097;1.16e-07;41!UBERON:0004457;1.19e-07;9!UBERON:0000042;1.19e-07;9!UBERON:0004905;5.07e-07;8!UBERON:0000982;5.07e-07;8!UBERON:0004770;5.07e-07;8!UBERON:0002384;5.34e-07;198!UBERON:0003688;5.40e-07;6!UBERON:0002358;5.40e-07;6!UBERON:0003684;5.40e-07;6!UBERON:0001178;5.40e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.00e-12,71;UBERON:0003059,2.00e-12,71;UBERON:0007282,2.00e-12,71;UBERON:0004290,2.00e-12,71;UBERON:0009618,2.00e-12,71;UBERON:0002199,3.02e-12,46;UBERON:0002416,3.02e-12,46;UBERON:0003077,4.20e-12,72;UBERON:0007285,4.20e-12,72;UBERON:0007524,8.60e-12,73;UBERON:0007503,4.18e-11,78;UBERON:0000486,9.74e-11,83;UBERON:0002384,1.64e-10,371;UBERON:0001013,4.72e-10,14;UBERON:0002097,1.08e-09,41;UBERON:0000926,2.15e-09,315;UBERON:0004120,2.15e-09,315;UBERON:0006603,2.15e-09,315;UBERON:0001134,4.11e-09,62;UBERON:0002036,4.11e-09,62;UBERON:0003082,4.11e-09,62;UBERON:0002385,1.42e-08,64;UBERON:0001015,1.42e-08,64;UBERON:0000383,1.42e-08,64;UBERON:0004905,3.18e-07,8;UBERON:0000982,3.18e-07,8;UBERON:0004770,3.18e-07,8 | |||
|phase1_expression=1.81678379270557,2.35510576280081,1.40954404095971,3.00219895059391,3.12872766099101,4.36169262050184,5.06599756336621,3.15859936713415,0.783556884599516,0,0,1.52908960491121,3.69273769519835,2.10402800032079,2.98257638155124,2.01697543935533,2.41077811209591,0.730310090387373,3.90346239032406,0,0.816002764977012,1.88072832886853,0,0.273748850145768,0.753255837568817,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,10.7312137552582,4.73091478821062,0.361439152384566,0.50133791063589,2.462390822334,0,20.9252994230133,0.567208902984407,1.55210578223795,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,1.25849830862972,0.550236083880135,0,0,0.35576626268671,0,0.402829317109147,0,0.976248230192678,0.367663080345869,4.86085168729056,0,0,0,0,0,0.183201743930407,0,0,0,8.94549513051573,3.79891534993739,7.81214166797991,13.1944845544454,2.4826786753885,0.560677600142307,0,7.15335890409764,1.55605517699883,3.09834545760283,2.61539044981534,1.66493170409425,4.60940739583999,0.234321431833797,4.99456122928513,1.1409436430889,5.23070381931304,1.64408298101271,0.971237666208789,1.12360645361799,0.408308342509787,0.859840221182376,0.413303124703062,0,1.23633464639278,0,0,0.841680569770331,0.375355559615893,0.277064115484183,0,0.919463387397059,0.300476117813194,3.97012641060074,4.84352016359927,0.85422955527427,4.02670612203168,3.30100205692843,1.75189299705346,8.24449728146013,1.30281799432113,3.54430297706659,1.94874010322397,8.83518209854401,1.74894807420369,1.45481451136931,3.90510551768276,0.906768884048762,0.67824236924195,0,0.545492241181669,0,0,0.265059536642971,0.464775771478074,0.207322110030741,0,0,0,4.5026865673502,1.38134921352481,10.2160944167035,16.6032280784005,0,0,0,0.110293972732394,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.368965315629341,1.71567810298526,1.42675371031213,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0,1.40890433082986,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.141775097242386,7.52291590703926,3.19697332365358,1.15014803749563,0,0,0,0,0,0.063497894292169,0,0,0,1.13110241973656,0,0.285826432630578,0.112131084345361,0.87192013766656,1.10007428731425,0.775630294546667,28.6125156681506,4.22651376278,0.797814349754612,1.04007436911366,1.28603687131071,1.41849132023278,1.5985330740966,2.14466990487221,2.17048642156577,0,3.90883421152482,1.77695974371273,1.58390374586686,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,2.15662369942424,2.29723871668228,0,1.59259437334337,4.10952645100767,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,6.00204625271613,4.06897535549603,13.1021642764408,17.664469890919,9.61984731707001,4.09994952474496,0,0,2.0694614258501,2.65690239414175,0.184369168541703,1.56390506042549,0.391602314925481,1.02943027143257,0,0,0,0.606255142892519,1.66435439510497,2.72151263996712,2.72918588600655,8.90079445070762,8.41980283299221,2.30650468660262,1.02341449813341,4.98647155545183,0,1.85051632563187,4.26148140751505,2.38168752440047,0.519254429183621,4.99704627377825,0.604297247958111,1.40354529212299,0,0.574072240823034,0.910455840033585,0.786746489756545,0,1.07821471946181,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0,0.256450125116389,0,0,0.824328093181778,0,0,0,0.650060246036521,0,2.03008508413456,1.69453478826109,2.6095624703442,1.65403886981437,3.97454906012612,5.075584286998,2.47157219506693,2.1367688555217,0.826424576804891,1.15314040419064,0.255225424989168,0.6069466851333,0,8.18512101759664,0,1.23213432070436,0,0,0.37064843820784,0,0.744316738719335,1.58189712359363,1.71567174531442,0.255897791311334,0.42793898803392,0.318203247925937,0,0.539617372749944,1.09814811894422,0.235624804691373,0,0,0,0.48763373908959,1.70599442741899,1.05650146756755,1.36499911407986,1.55545975149084,1.13008116620243,0,1.99031692572366,0,1.73632660280006,1.31178950409327,0,0.6196469961995,0,2.00775893085672,3.04572027140676,0,0,1.68886108238131,6.91519275215794,0,0.699869440489966,0,0,1.08890984861323,0.941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.614321404198464,0,0,5.89936136621401,0,0,0.398495976502139,0,0,0,0,2.48831670129446,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.91153644677601,0,0,0,14.6740533476683,0.824378340616761,34.6472604412113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0.577901179803038,0.600420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| ||
|short_description=p@chr2:216264013..216264051,+ | |||
}} | }} |
Latest revision as of 06:08, 29 July 2015
Short description: | p@chr2:216264013..216264051, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216264013..216264051, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.54e-18 | 76 |
multi fate stem cell | 2.99e-15 | 427 |
somatic stem cell | 4.76e-15 | 433 |
stem cell | 3.82e-14 | 441 |
skin fibroblast | 3.08e-11 | 23 |
mesenchymal stem cell of adipose | 2.23e-10 | 8 |
muscle precursor cell | 2.56e-10 | 58 |
myoblast | 2.56e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.56e-10 | 58 |
connective tissue cell | 5.32e-10 | 361 |
muscle cell | 1.95e-09 | 55 |
preadipocyte | 3.24e-09 | 12 |
mesenchymal cell | 4.68e-08 | 354 |
electrically responsive cell | 9.16e-08 | 61 |
electrically active cell | 9.16e-08 | 61 |
cell of skeletal muscle | 1.08e-07 | 9 |
cardiocyte | 1.09e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
somite | 2.00e-12 | 71 |
presomitic mesoderm | 2.00e-12 | 71 |
presumptive segmental plate | 2.00e-12 | 71 |
dermomyotome | 2.00e-12 | 71 |
trunk paraxial mesoderm | 2.00e-12 | 71 |
integument | 3.02e-12 | 46 |
integumental system | 3.02e-12 | 46 |
paraxial mesoderm | 4.20e-12 | 72 |
presumptive paraxial mesoderm | 4.20e-12 | 72 |
dense mesenchyme tissue | 8.60e-12 | 73 |
epithelial vesicle | 4.18e-11 | 78 |
multilaminar epithelium | 9.74e-11 | 83 |
connective tissue | 1.64e-10 | 371 |
adipose tissue | 4.72e-10 | 14 |
skin of body | 1.08e-09 | 41 |
mesoderm | 2.15e-09 | 315 |
mesoderm-derived structure | 2.15e-09 | 315 |
presumptive mesoderm | 2.15e-09 | 315 |
skeletal muscle tissue | 4.11e-09 | 62 |
striated muscle tissue | 4.11e-09 | 62 |
myotome | 4.11e-09 | 62 |
muscle tissue | 1.42e-08 | 64 |
musculature | 1.42e-08 | 64 |
musculature of body | 1.42e-08 | 64 |
articulation | 3.18e-07 | 8 |
skeletal joint | 3.18e-07 | 8 |
articular system | 3.18e-07 | 8 |