FFCP PHASE1:Mm9::chr5:140019843..140019858,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22255 | |EntrezGene=22255 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2001 | |MCL_coexpression_id=2001 | ||
|TSSclassifier=NA | |||
|UniProt=O08934 | |UniProt=O08934 | ||
|association_with_transcript=0bp_to_ENSMUST00000031523,ENSMUST00000174792,NM_013702,uc009agu.1,uc009agv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000031523,ENSMUST00000174792,NM_013702,uc009agu.1,uc009agv.1_5end | ||
|cluster_id=chr5:140019843..140019858,+ | |||
|description=CAGE_peak_2_at_Uncx_5end | |description=CAGE_peak_2_at_Uncx_5end | ||
|id=chr5:140019843..140019858,+ | |id=chr5:140019843..140019858,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.92e-14!23;CL:0000337!1.92e-14!23;CL:0000540!4.06e-08!33;CL:0000047!4.06e-08!33;CL:0000031!4.06e-08!33;CL:0000404!4.06e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.92e-14!23;CL:0000337!1.92e-14!23;CL:0000540!4.06e-08!33;CL:0000047!4.06e-08!33;CL:0000031!4.06e-08!33;CL:0000404!4.06e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.07e-22,23;CL:0000337,3.07e-22,23;CL:0000540,3.79e-14,33;CL:0000047,3.79e-14,33;CL:0000031,3.79e-14,33;CL:0000404,3.79e-14,33;CL:0000393,2.64e-11,39;CL:0000211,2.64e-11,39;CL:0002319,3.66e-11,43;CL:0000221,8.32e-11,44;CL:0000133,8.32e-11,44;CL:0000120,1.24e-07,3;CL:0002613,4.49e-07,3;CL:0002614,6.80e-07,3;CL:0002612,8.54e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.81e-10!21;UBERON:0001017!5.04e-09!73;UBERON:0005743!5.04e-09!73;UBERON:0001049!7.68e-09!52;UBERON:0005068!7.68e-09!52;UBERON:0006241!7.68e-09!52;UBERON:0007135!7.68e-09!52;UBERON:0000073!1.66e-08!75;UBERON:0001016!1.66e-08!75;UBERON:0003076!1.92e-08!12;UBERON:0003057!1.92e-08!12;UBERON:0002298!4.30e-07!6;UBERON:0002616!5.00e-07!49;UBERON:0002346!7.44e-07!71;UBERON:0003075!7.44e-07!71;UBERON:0007284!7.44e-07!71;UBERON:0002240!8.67e-07!6;UBERON:0005174!8.67e-07!6;UBERON:0001137!8.67e-07!6;UBERON:0000955!9.53e-07!50;UBERON:0006238!9.53e-07!50 | |ontology_enrichment_uberon=UBERON:0000489!2.81e-10!21;UBERON:0001017!5.04e-09!73;UBERON:0005743!5.04e-09!73;UBERON:0001049!7.68e-09!52;UBERON:0005068!7.68e-09!52;UBERON:0006241!7.68e-09!52;UBERON:0007135!7.68e-09!52;UBERON:0000073!1.66e-08!75;UBERON:0001016!1.66e-08!75;UBERON:0003076!1.92e-08!12;UBERON:0003057!1.92e-08!12;UBERON:0002298!4.30e-07!6;UBERON:0002616!5.00e-07!49;UBERON:0002346!7.44e-07!71;UBERON:0003075!7.44e-07!71;UBERON:0007284!7.44e-07!71;UBERON:0002240!8.67e-07!6;UBERON:0005174!8.67e-07!6;UBERON:0001137!8.67e-07!6;UBERON:0000955!9.53e-07!50;UBERON:0006238!9.53e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.99e-12,12;UBERON:0003057,1.99e-12,12;UBERON:0001017,2.61e-10,73;UBERON:0000489,2.85e-10,21;UBERON:0000073,3.81e-10,54;UBERON:0001948,4.26e-10,5;UBERON:0002315,4.26e-10,5;UBERON:0001016,7.08e-10,75;UBERON:0002420,4.60e-09,8;UBERON:0007245,4.60e-09,8;UBERON:0010009,4.60e-09,8;UBERON:0010011,4.60e-09,8;UBERON:0000454,4.60e-09,8;UBERON:0002950,1.59e-08,4;UBERON:0001891,1.59e-08,4;UBERON:0009616,1.59e-08,4;UBERON:0010286,1.59e-08,4;UBERON:0002240,2.44e-08,6;UBERON:0005174,2.44e-08,6;UBERON:0001137,2.44e-08,6;UBERON:0001049,2.11e-07,52;UBERON:0005068,2.11e-07,52;UBERON:0006241,2.11e-07,52;UBERON:0007135,2.11e-07,52;UBERON:0002038,6.80e-07,3;UBERON:0009663,6.80e-07,3;UBERON:0009661,6.80e-07,3;UBERON:0000125,6.80e-07,3;UBERON:0002308,6.80e-07,3;UBERON:0002257,8.54e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,20.2316460859598,17.9856932952491,14.5781222806421,0,0,0,0,0,0,0,0.103689612308478,0,0,2.85650984403804,3.97563373712904,0.367472397644862,0,0,1.10115880999389,2.80912143787413,2.61131106535614,9.49581271657396,7.13603620098795,10.4182674111352,7.53794097303729,5.06486349028512,5.19514042441154,4.12480019663135,3.41692033917847,9.87917062874093,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0,0,0,0,0,0,0,0,0,19.9090941967852,23.2485844562935,0,0,0,0,3.14560342750128,0,0.125654352112864,0,0,1.87009240103604,0.648965052271031,0,0,0,0,0,0,0.360124259610698,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1055357563054,19.4222471436539,18.0332377076929,13.0336849821001,10.6673867942194,11.3620028222316,0.822074982615345,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18936737920883,11.5717213286299,3.58540572083682,1.45864030240976,0.209613162627982,1.47074806760011,1.11123363900808,1.23621034343337,0.962757628775446,0.758091635291392,0,0.377252682772152,1.03005658216871,0.89635213366817,1.37845125493472,0,1.27472758539341,1.15745532278223,1.64834360321323,1.03039244094078,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.564656282491984,0.846146078916765,0.73171189149109,0.263069711437843,0.814824683075171,0,0.711810108745045,0.591026894253381,0.818462086339379,1.23949472948773,0.964533054905707,0.999242311751784,1.16965804222704,1.28922632428979,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0,0,0,20.2316460859598,17.9856932952491,14.5781222806421,0,0,0,0,0,0,0,0.103689612308478,0,0,2.85650984403804,3.97563373712904,0.367472397644862,0,0,1.10115880999389,2.80912143787413,2.61131106535614,9.49581271657396,7.13603620098795,10.4182674111352,7.53794097303729,5.06486349028512,5.19514042441154,4.12480019663135,3.41692033917847,9.87917062874093,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0,0,0,0,0,0,0,0,0,19.9090941967852,23.2485844562935,0,0,0,0,3.14560342750128,0,0.125654352112864,0,0,1.87009240103604,0.648965052271031,0,0,0,0,0,0,0.360124259610698,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1055357563054,19.4222471436539,18.0332377076929,13.0336849821001,10.6673867942194,11.3620028222316,0.822074982615345,0.295220295959204,0.31399745568275,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18936737920883,11.5717213286299,3.58540572083682,1.45864030240976,0.209613162627982,1.47074806760011,1.11123363900808,1.23621034343337,0.962757628775446,0.758091635291392,0,0.377252682772152,1.03005658216871,0.89635213366817,1.37845125493472,0,1.27472758539341,1.15745532278223,1.64834360321323,1.03039244094078,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.564656282491984,0.846146078916765,0.73171189149109,0.263069711437843,0.814824683075171,0,0.711810108745045,0.591026894253381,0.818462086339379,1.23949472948773,0.964533054905707,0.999242311751784,1.16965804222704,1.28922632428979,0.382576664137687,0,0.231867835620421 | ||
|short_description=p2@Uncx | |short_description=p2@Uncx | ||
}} | }} |
Latest revision as of 15:57, 25 September 2015
Short description: | p2@Uncx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Uncx_5end |
Coexpression cluster: | MCL_coexpression_mm9:2001 |
Association with transcript: | 0bp_to_ENSMUST00000031523, ENSMUST00000174792, NM_013702, uc009agu.1, uc009agv.1_5end |
EntrezGene: | Uncx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.07e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.07e-22 | 23 |
neuron | 3.79e-14 | 33 |
neuronal stem cell | 3.79e-14 | 33 |
neuroblast | 3.79e-14 | 33 |
electrically signaling cell | 3.79e-14 | 33 |
electrically responsive cell | 2.64e-11 | 39 |
electrically active cell | 2.64e-11 | 39 |
neural cell | 3.66e-11 | 43 |
ectodermal cell | 8.32e-11 | 44 |
neurectodermal cell | 8.32e-11 | 44 |
granule cell | 1.24e-07 | 3 |
striatum neuron | 4.49e-07 | 3 |
neuron of the substantia nigra | 6.80e-07 | 3 |
neuron of the ventral spinal cord | 8.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 1.99e-12 | 12 |
chordal neural plate | 1.99e-12 | 12 |
central nervous system | 2.61e-10 | 73 |
cavitated compound organ | 2.85e-10 | 21 |
regional part of nervous system | 3.81e-10 | 54 |
regional part of spinal cord | 4.26e-10 | 5 |
gray matter of spinal cord | 4.26e-10 | 5 |
nervous system | 7.08e-10 | 75 |
basal ganglion | 4.60e-09 | 8 |
nuclear complex of neuraxis | 4.60e-09 | 8 |
aggregate regional part of brain | 4.60e-09 | 8 |
collection of basal ganglia | 4.60e-09 | 8 |
cerebral subcortex | 4.60e-09 | 8 |
regional part of midbrain | 1.59e-08 | 4 |
midbrain | 1.59e-08 | 4 |
presumptive midbrain | 1.59e-08 | 4 |
midbrain neural tube | 1.59e-08 | 4 |
spinal cord | 2.44e-08 | 6 |
dorsal region element | 2.44e-08 | 6 |
dorsum | 2.44e-08 | 6 |
neural tube | 2.11e-07 | 52 |
neural rod | 2.11e-07 | 52 |
future spinal cord | 2.11e-07 | 52 |
neural keel | 2.11e-07 | 52 |
substantia nigra | 6.80e-07 | 3 |
telencephalic nucleus | 6.80e-07 | 3 |
midbrain nucleus | 6.80e-07 | 3 |
neural nucleus | 6.80e-07 | 3 |
nucleus of brain | 6.80e-07 | 3 |
ventral horn of spinal cord | 8.54e-07 | 3 |