Personal tools

FFCP PHASE1:Mm9::chr8:56071303..56071309,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr8:56071303..56071309,+
|description=CAGE_peak_at_chr8:56071303..56071309,+
|description=CAGE_peak_at_chr8:56071303..56071309,+
|id=chr8:56071303..56071309,+
|id=chr8:56071303..56071309,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.30e-15!63;UBERON:0003056!3.84e-15!49;UBERON:0001049!2.09e-14!52;UBERON:0005068!2.09e-14!52;UBERON:0006241!2.09e-14!52;UBERON:0007135!2.09e-14!52;UBERON:0000955!8.16e-14!50;UBERON:0006238!8.16e-14!50;UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0002616!3.65e-13!49;UBERON:0003080!3.74e-12!40;UBERON:0002020!1.11e-11!34;UBERON:0002780!1.42e-11!39;UBERON:0001890!1.42e-11!39;UBERON:0006240!1.42e-11!39;UBERON:0002791!1.20e-10!29;UBERON:0003528!1.20e-10!29;UBERON:0001893!1.20e-10!29;UBERON:0001017!1.47e-10!73;UBERON:0005743!1.47e-10!73;UBERON:0000073!1.16e-09!75;UBERON:0001016!1.16e-09!75;UBERON:0000025!3.35e-09!114;UBERON:0004111!1.27e-08!122;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0000956!2.66e-08!21;UBERON:0001869!2.66e-08!21;UBERON:0000203!2.66e-08!21;UBERON:0004121!5.47e-08!102;UBERON:0000924!5.47e-08!102;UBERON:0006601!5.47e-08!102
|ontology_enrichment_uberon=UBERON:0000033!2.30e-15!63;UBERON:0003056!3.84e-15!49;UBERON:0001049!2.09e-14!52;UBERON:0005068!2.09e-14!52;UBERON:0006241!2.09e-14!52;UBERON:0007135!2.09e-14!52;UBERON:0000955!8.16e-14!50;UBERON:0006238!8.16e-14!50;UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0002616!3.65e-13!49;UBERON:0003080!3.74e-12!40;UBERON:0002020!1.11e-11!34;UBERON:0002780!1.42e-11!39;UBERON:0001890!1.42e-11!39;UBERON:0006240!1.42e-11!39;UBERON:0002791!1.20e-10!29;UBERON:0003528!1.20e-10!29;UBERON:0001893!1.20e-10!29;UBERON:0001017!1.47e-10!73;UBERON:0005743!1.47e-10!73;UBERON:0000073!1.16e-09!75;UBERON:0001016!1.16e-09!75;UBERON:0000025!3.35e-09!114;UBERON:0004111!1.27e-08!122;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0000956!2.66e-08!21;UBERON:0001869!2.66e-08!21;UBERON:0000203!2.66e-08!21;UBERON:0004121!5.47e-08!102;UBERON:0000924!5.47e-08!102;UBERON:0006601!5.47e-08!102
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.54e-18,64;UBERON:0003075,1.54e-18,64;UBERON:0007284,1.54e-18,64;UBERON:0003056,2.21e-18,49;UBERON:0000955,3.30e-17,47;UBERON:0006238,3.30e-17,47;UBERON:0001049,1.05e-16,52;UBERON:0005068,1.05e-16,52;UBERON:0006241,1.05e-16,52;UBERON:0007135,1.05e-16,52;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0002616,3.41e-16,46;UBERON:0002020,2.06e-15,34;UBERON:0000073,2.08e-15,54;UBERON:0003080,3.72e-15,40;UBERON:0010371,1.04e-14,73;UBERON:0002780,2.96e-14,39;UBERON:0001890,2.96e-14,39;UBERON:0006240,2.96e-14,39;UBERON:0002021,4.71e-13,10;UBERON:0000411,4.71e-13,10;UBERON:0001950,4.71e-13,10;UBERON:0000956,1.70e-12,21;UBERON:0001869,1.70e-12,21;UBERON:0000203,1.70e-12,21;UBERON:0001017,1.91e-11,73;UBERON:0010314,3.28e-11,92;UBERON:0001016,7.49e-11,75;UBERON:0004121,8.58e-11,95;UBERON:0000924,8.58e-11,95;UBERON:0006601,8.58e-11,95;UBERON:0002619,1.52e-09,17
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06268836910977,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0,2.17748185847803,1.35005938331691,1.89292465216244,0.571301968807607,0.441737081903227,0.857435594504678,0.862609239164127,0,1.10115880999389,0.510749352340751,0.614426133024974,0.527545150920775,1.55528994124096,2.6045668527838,0,6.75315132038016,3.66715794664344,2.06240009831567,1.99320353118744,0.931997229126503,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0.150722640552623,0.705532242814229,0,0,1.44599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,1.86391761218122,14.0534782565543,16.3368431314495,0,0,0,0,5.09288173976397,6.8625090422794,4.52355667606312,7.12679712788333,8.43861009190091,2.90903262383384,6.65189178577806,0.407357455401265,0.870848794270651,0.505445516867349,0.420883711772948,0.390361328888111,0.459804208866946,1.62055916824814,4.37043971723574,4.55844544313897,5.63700369253339,4.96619140166563,2.32833033665114,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.540186184383045,0.946978942340841,0.983821158737019,0.771335564436891,1.16266972375204,0.804820204198858,0.817357396570186,0.658239399653922,0.985004784474571,0.56748166682099,0.438599962275997,1.09775057645525,0.536825675041487,10.0939175310781,3.49875682089567,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,1.83286195060783,0.969762435838129,0.420814919341911,0.885311519739602,0.885660887877613,2.98297582898612,2.22114895059241,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0.482443521363367,1.47802552133284,0,0,0.509235257325564,0.234690248288502,0,0,0.585400943573396,0.472905432318573,0.221464689648775,0.478364305972461,1.63863314715738,1.55416483679306,1.88043776155965,0,0,0,0,0.963303539926752,2.10981035865966,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,9.3183181762324,0.425820255624806,0.890328018336276,0.325773918707152,0.824850614862677,0,0.485561272309963,0,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,7.83011093233712,0.720244376125241,0.129358683782755,0.428674070063185,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,2.41052892613663,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.609958401380546,0.216010681643603,0.418176592028937,1.09181281873089,0.944050424693745,0.661227645802687,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.772758376128762,0,0.549454872801795,0.857473516316263,0,11.2950368523413,6.90487854760765,8.02053718815155,18.2164373284309,5.48066015816514,12.0863023582352,6.75022500231806,6.75481804836331,8.60970577069989,5.1776031175182,0.103787347584177,0.399024873401031,1.19513524027894,1.45864030240976,0.209613162627982,0,1.33348036680969,3.5025959730612,2.24643446714271,1.51618327058278,2.5347929989024,1.32038438970253,2.43467919421694,1.21647789569252,1.7230640686684,1.90517476513229,2.31768651889711,1.73618298417335,2.88460130562315,1.61918812147837,1.37147700954166,1.77475806159337,0.953744759789284,1.74415699958794,2.4468438907986,2.5384382367503,1.46342378298218,2.36762740294059,1.62964936615034,2.24456908663095,1.54225523561426,1.87158516513571,3.27384834535751,2.63392630016142,0.964533054905707,1.49886346762768,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06268836910977,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0,2.17748185847803,1.35005938331691,1.89292465216244,0.571301968807607,0.441737081903227,0.857435594504678,0.862609239164127,0,1.10115880999389,0.510749352340751,0.614426133024974,0.527545150920775,1.55528994124096,2.6045668527838,0,6.75315132038016,3.66715794664344,2.06240009831567,1.99320353118744,0.931997229126503,0,0,0.869593466105033,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0,0,0,0.150722640552623,0.705532242814229,0,0,1.44599356919912,0,0.323533699894818,0.883366073841574,1.45462575940567,1.86391761218122,14.0534782565543,16.3368431314495,0,0,0,0,5.09288173976397,6.8625090422794,4.52355667606312,7.12679712788333,8.43861009190091,2.90903262383384,6.65189178577806,0.407357455401265,0.870848794270651,0.505445516867349,0.420883711772948,0.390361328888111,0.459804208866946,1.62055916824814,4.37043971723574,4.55844544313897,5.63700369253339,4.96619140166563,2.32833033665114,0,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.469052119962192,0.540186184383045,0.946978942340841,0.983821158737019,0.771335564436891,1.16266972375204,0.804820204198858,0.817357396570186,0.658239399653922,0.985004784474571,0.56748166682099,0.438599962275997,1.09775057645525,0.536825675041487,10.0939175310781,3.49875682089567,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,1.1270773567308,1.83286195060783,0.969762435838129,0.420814919341911,0.885311519739602,0.885660887877613,2.98297582898612,2.22114895059241,0.296452627087149,0.333690211432188,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0.252578877947112,0.538192240565737,0.482443521363367,1.47802552133284,0,0,0.509235257325564,0.234690248288502,0,0,0.585400943573396,0.472905432318573,0.221464689648775,0.478364305972461,1.63863314715738,1.55416483679306,1.88043776155965,0,0,0,0,0.963303539926752,2.10981035865966,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0,0,0.809621403349789,0,0.395287777946524,9.3183181762324,0.425820255624806,0.890328018336276,0.325773918707152,0.824850614862677,0,0.485561272309963,0,0.565815239267694,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,7.83011093233712,0.720244376125241,0.129358683782755,0.428674070063185,0.532020700926821,0.178368817602071,0.493647061806363,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.0603129249281559,0,0,0.582961673259701,2.41052892613663,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0.457556346413045,0,0,0,0,0,0.609958401380546,0.216010681643603,0.418176592028937,1.09181281873089,0.944050424693745,0.661227645802687,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.772758376128762,0,0.549454872801795,0.857473516316263,0,11.2950368523413,6.90487854760765,8.02053718815155,18.2164373284309,5.48066015816514,12.0863023582352,6.75022500231806,6.75481804836331,8.60970577069989,5.1776031175182,0.103787347584177,0.399024873401031,1.19513524027894,1.45864030240976,0.209613162627982,0,1.33348036680969,3.5025959730612,2.24643446714271,1.51618327058278,2.5347929989024,1.32038438970253,2.43467919421694,1.21647789569252,1.7230640686684,1.90517476513229,2.31768651889711,1.73618298417335,2.88460130562315,1.61918812147837,1.37147700954166,1.77475806159337,0.953744759789284,1.74415699958794,2.4468438907986,2.5384382367503,1.46342378298218,2.36762740294059,1.62964936615034,2.24456908663095,1.54225523561426,1.87158516513571,3.27384834535751,2.63392630016142,0.964533054905707,1.49886346762768,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0
|short_description=p@chr8:56071303..56071309,+
|short_description=p@chr8:56071303..56071309,+
}}
}}

Latest revision as of 22:07, 3 August 2015

Short description:p@chr8:56071303..56071309, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr8:56071303..56071309, +
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr8:56071303..56071309+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C64.56
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F32.98
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.54e-1864
neural plate1.54e-1864
presumptive neural plate1.54e-1864
pre-chordal neural plate2.21e-1849
brain3.30e-1747
future brain3.30e-1747
neural tube1.05e-1652
neural rod1.05e-1652
future spinal cord1.05e-1652
neural keel1.05e-1652
brain grey matter3.15e-1629
regional part of telencephalon3.15e-1629
telencephalon3.15e-1629
regional part of brain3.41e-1646
gray matter2.06e-1534
regional part of nervous system2.08e-1554
anterior neural tube3.72e-1540
ecto-epithelium1.04e-1473
regional part of forebrain2.96e-1439
forebrain2.96e-1439
future forebrain2.96e-1439
occipital lobe4.71e-1310
visual cortex4.71e-1310
neocortex4.71e-1310
cerebral cortex1.70e-1221
cerebral hemisphere1.70e-1221
pallium1.70e-1221
central nervous system1.91e-1173
structure with developmental contribution from neural crest3.28e-1192
nervous system7.49e-1175
ectoderm-derived structure8.58e-1195
ectoderm8.58e-1195
presumptive ectoderm8.58e-1195
regional part of cerebral cortex1.52e-0917
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:56071303..56071309,%2B&oldid=3706171"