FFCP PHASE1:Mm9::chr8:56071303..56071309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |MCL_coexpression_id=39 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:56071303..56071309,+ | |||
|description=CAGE_peak_at_chr8:56071303..56071309,+ | |description=CAGE_peak_at_chr8:56071303..56071309,+ | ||
|id=chr8:56071303..56071309,+ | |id=chr8:56071303..56071309,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.30e-15!63;UBERON:0003056!3.84e-15!49;UBERON:0001049!2.09e-14!52;UBERON:0005068!2.09e-14!52;UBERON:0006241!2.09e-14!52;UBERON:0007135!2.09e-14!52;UBERON:0000955!8.16e-14!50;UBERON:0006238!8.16e-14!50;UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0002616!3.65e-13!49;UBERON:0003080!3.74e-12!40;UBERON:0002020!1.11e-11!34;UBERON:0002780!1.42e-11!39;UBERON:0001890!1.42e-11!39;UBERON:0006240!1.42e-11!39;UBERON:0002791!1.20e-10!29;UBERON:0003528!1.20e-10!29;UBERON:0001893!1.20e-10!29;UBERON:0001017!1.47e-10!73;UBERON:0005743!1.47e-10!73;UBERON:0000073!1.16e-09!75;UBERON:0001016!1.16e-09!75;UBERON:0000025!3.35e-09!114;UBERON:0004111!1.27e-08!122;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0000956!2.66e-08!21;UBERON:0001869!2.66e-08!21;UBERON:0000203!2.66e-08!21;UBERON:0004121!5.47e-08!102;UBERON:0000924!5.47e-08!102;UBERON:0006601!5.47e-08!102 | |ontology_enrichment_uberon=UBERON:0000033!2.30e-15!63;UBERON:0003056!3.84e-15!49;UBERON:0001049!2.09e-14!52;UBERON:0005068!2.09e-14!52;UBERON:0006241!2.09e-14!52;UBERON:0007135!2.09e-14!52;UBERON:0000955!8.16e-14!50;UBERON:0006238!8.16e-14!50;UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0002616!3.65e-13!49;UBERON:0003080!3.74e-12!40;UBERON:0002020!1.11e-11!34;UBERON:0002780!1.42e-11!39;UBERON:0001890!1.42e-11!39;UBERON:0006240!1.42e-11!39;UBERON:0002791!1.20e-10!29;UBERON:0003528!1.20e-10!29;UBERON:0001893!1.20e-10!29;UBERON:0001017!1.47e-10!73;UBERON:0005743!1.47e-10!73;UBERON:0000073!1.16e-09!75;UBERON:0001016!1.16e-09!75;UBERON:0000025!3.35e-09!114;UBERON:0004111!1.27e-08!122;UBERON:0002021!2.52e-08!10;UBERON:0000411!2.52e-08!10;UBERON:0001950!2.52e-08!10;UBERON:0000956!2.66e-08!21;UBERON:0001869!2.66e-08!21;UBERON:0000203!2.66e-08!21;UBERON:0004121!5.47e-08!102;UBERON:0000924!5.47e-08!102;UBERON:0006601!5.47e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.54e-18,64;UBERON:0003075,1.54e-18,64;UBERON:0007284,1.54e-18,64;UBERON:0003056,2.21e-18,49;UBERON:0000955,3.30e-17,47;UBERON:0006238,3.30e-17,47;UBERON:0001049,1.05e-16,52;UBERON:0005068,1.05e-16,52;UBERON:0006241,1.05e-16,52;UBERON:0007135,1.05e-16,52;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0002616,3.41e-16,46;UBERON:0002020,2.06e-15,34;UBERON:0000073,2.08e-15,54;UBERON:0003080,3.72e-15,40;UBERON:0010371,1.04e-14,73;UBERON:0002780,2.96e-14,39;UBERON:0001890,2.96e-14,39;UBERON:0006240,2.96e-14,39;UBERON:0002021,4.71e-13,10;UBERON:0000411,4.71e-13,10;UBERON:0001950,4.71e-13,10;UBERON:0000956,1.70e-12,21;UBERON:0001869,1.70e-12,21;UBERON:0000203,1.70e-12,21;UBERON:0001017,1.91e-11,73;UBERON:0010314,3.28e-11,92;UBERON:0001016,7.49e-11,75;UBERON:0004121,8.58e-11,95;UBERON:0000924,8.58e-11,95;UBERON:0006601,8.58e-11,95;UBERON:0002619,1.52e-09,17 | |||
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| ||
|short_description=p@chr8:56071303..56071309,+ | |short_description=p@chr8:56071303..56071309,+ | ||
}} | }} |
Latest revision as of 22:07, 3 August 2015
Short description: | p@chr8:56071303..56071309, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:56071303..56071309, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.54e-18 | 64 |
neural plate | 1.54e-18 | 64 |
presumptive neural plate | 1.54e-18 | 64 |
pre-chordal neural plate | 2.21e-18 | 49 |
brain | 3.30e-17 | 47 |
future brain | 3.30e-17 | 47 |
neural tube | 1.05e-16 | 52 |
neural rod | 1.05e-16 | 52 |
future spinal cord | 1.05e-16 | 52 |
neural keel | 1.05e-16 | 52 |
brain grey matter | 3.15e-16 | 29 |
regional part of telencephalon | 3.15e-16 | 29 |
telencephalon | 3.15e-16 | 29 |
regional part of brain | 3.41e-16 | 46 |
gray matter | 2.06e-15 | 34 |
regional part of nervous system | 2.08e-15 | 54 |
anterior neural tube | 3.72e-15 | 40 |
ecto-epithelium | 1.04e-14 | 73 |
regional part of forebrain | 2.96e-14 | 39 |
forebrain | 2.96e-14 | 39 |
future forebrain | 2.96e-14 | 39 |
occipital lobe | 4.71e-13 | 10 |
visual cortex | 4.71e-13 | 10 |
neocortex | 4.71e-13 | 10 |
cerebral cortex | 1.70e-12 | 21 |
cerebral hemisphere | 1.70e-12 | 21 |
pallium | 1.70e-12 | 21 |
central nervous system | 1.91e-11 | 73 |
structure with developmental contribution from neural crest | 3.28e-11 | 92 |
nervous system | 7.49e-11 | 75 |
ectoderm-derived structure | 8.58e-11 | 95 |
ectoderm | 8.58e-11 | 95 |
presumptive ectoderm | 8.58e-11 | 95 |
regional part of cerebral cortex | 1.52e-09 | 17 |