FFCP PHASE1:Hg19::chr2:242447543..242447562,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:242447543..242447562,-
|short_description=p5@STK25
|description=CAGE_peak_5_at_STK25_5end
|association_with_transcript=158bp_to_uc002wbm.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10494 | |EntrezGene=10494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11404 | |HGNC=11404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=158bp_to_uc002wbm.2_5end | |||
|cluster_id=chr2:242447543..242447562,- | |||
|description=CAGE_peak_5_at_STK25_5end | |||
|id=chr2:242447543..242447562,- | |||
|ontology_enrichment_celltype=CL:0000222!4.43e-24!119;CL:0002321!7.54e-21!248;CL:0000220!7.62e-21!246;CL:0002139!4.15e-16!24;CL:0000115!1.01e-13!35;CL:0000213!1.03e-13!57;CL:0000215!1.03e-13!57;CL:0002078!4.39e-13!44;CL:0000071!6.78e-13!18;CL:0002546!6.78e-13!18;CL:0000183!1.16e-09!59;CL:0000055!1.59e-09!180;CL:0000066!1.59e-09!254;CL:0000680!5.24e-09!57;CL:0000056!5.24e-09!57;CL:0000355!5.24e-09!57;CL:0000187!3.61e-08!54;CL:0000076!6.44e-08!62;CL:1000413!1.52e-07!9;CL:0000393!2.58e-07!60;CL:0000211!2.58e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.43e-33;24!CL:0000115;4.11e-30;36!CL:0000071;3.45e-29;18!CL:0002078;7.61e-22;45!CL:1000413;3.09e-19;9!CL:0000213;1.18e-18;58!CL:0000215;1.18e-18;58!CL:0002544;4.32e-13;6!CL:0002681;2.80e-08;12!CL:0002584;2.80e-08;12!CL:0002144;4.01e-08;3!CL:1000746;4.04e-08;7!CL:1000612;4.04e-08;7!CL:0002188;1.14e-07;5!CL:0000076;3.87e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.53e-35,36;CL:0002139,9.37e-33,24;CL:0002078,2.46e-31,45;CL:0000222,1.63e-30,121;CL:0000071,3.32e-29,18;CL:0002546,3.32e-29,18;CL:0000213,3.97e-28,58;CL:0000215,3.97e-28,58;CL:1000413,2.20e-19,9;CL:0002321,1.84e-16,250;CL:0002544,3.82e-13,6;CL:0000076,4.53e-11,63;CL:0002681,3.80e-08,12;CL:0002584,3.80e-08,12;CL:0002144,3.86e-08,3;CL:1000746,6.47e-08,7;CL:1000612,6.47e-08,7;CL:0000066,1.25e-07,253;CL:0002188,1.72e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.45e-29;18!CL:0000222;2.88e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!2.22e-17!138;UBERON:0000119!5.66e-16!312;UBERON:0000483!6.62e-16!309;UBERON:0000055!6.64e-16!69;UBERON:0002049!4.37e-15!79;UBERON:0007798!4.37e-15!79;UBERON:0001981!1.95e-13!60;UBERON:0007500!1.95e-13!60;UBERON:0004537!1.95e-13!60;UBERON:0006965!1.95e-13!60;UBERON:0003914!3.80e-13!118;UBERON:0000487!5.17e-13!22;UBERON:0001986!6.78e-13!18;UBERON:0004638!6.78e-13!18;UBERON:0004852!6.78e-13!18;UBERON:0005256!9.59e-13!143;UBERON:0004872!1.81e-12!84;UBERON:0006914!1.85e-11!25;UBERON:0000486!6.65e-11!82;UBERON:0004290!1.09e-10!70;UBERON:0002100!1.43e-10!216;UBERON:0003104!2.28e-10!238;UBERON:0009142!2.28e-10!238;UBERON:0000475!3.03e-10!365;UBERON:0001134!4.59e-10!61;UBERON:0002036!4.59e-10!61;UBERON:0003082!4.59e-10!61;UBERON:0000914!5.38e-10!83;UBERON:0002329!5.38e-10!83;UBERON:0003077!5.38e-10!83;UBERON:0003059!5.38e-10!83;UBERON:0007282!5.38e-10!83;UBERON:0009618!5.38e-10!83;UBERON:0007285!5.38e-10!83;UBERON:0004111!1.40e-09!241;UBERON:0000481!3.30e-09!347;UBERON:0002385!4.15e-09!63;UBERON:0001015!4.15e-09!63;UBERON:0000383!4.15e-09!63;UBERON:0000025!8.94e-09!194;UBERON:0004535!2.29e-08!110;UBERON:0000477!2.53e-08!286;UBERON:0001637!8.33e-08!42;UBERON:0003509!8.33e-08!42;UBERON:0004572!8.33e-08!42;UBERON:0001009!9.30e-08!113;UBERON:0003915!1.52e-07!9;UBERON:0004700!1.52e-07!9;UBERON:0001917!1.52e-07!9;UBERON:0000468!6.93e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.21e-29;22!UBERON:0004638;3.45e-29;18!UBERON:0001986;3.45e-29;18!UBERON:0004852;3.45e-29;18!UBERON:0006914;3.50e-25;25!UBERON:0000490;2.09e-19;33!UBERON:0003915;3.09e-19;9!UBERON:0004700;3.09e-19;9!UBERON:0001917;3.09e-19;9!UBERON:0003914;2.23e-12;74!UBERON:0000055;2.56e-12;65!UBERON:0007500;4.83e-12;56!UBERON:0001981;4.83e-12;56!UBERON:0004537;4.83e-12;56!UBERON:0000353;2.24e-10;15!UBERON:0001637;2.83e-09;42!UBERON:0003509;2.83e-09;42!UBERON:0004572;2.83e-09;42!UBERON:0002049;1.45e-08;75!UBERON:0007798;1.45e-08;75!UBERON:0001225;2.80e-08;12!UBERON:0008987;2.80e-08;12!UBERON:0000947;3.25e-08;21!UBERON:0010191;3.25e-08;21!UBERON:0010523;4.01e-08;3!UBERON:0001915;4.01e-08;3!UBERON:0001982;4.01e-08;3!UBERON:0000074;4.04e-08;7!UBERON:0001229;4.04e-08;7!UBERON:0000025;1.53e-07;93!UBERON:0004573;2.94e-07;33!UBERON:0004571;2.94e-07;33!UBERON:0002107;8.05e-07;19!UBERON:0006925;8.05e-07;19 | |||
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|short_description=p5@STK25 | |||
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Latest revision as of 10:39, 16 September 2015
Short description: | p5@STK25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STK25_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_uc002wbm.2_5end |
EntrezGene: | STK25 |
HGNC: | 11404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.53e-35 | 36 |
endothelial cell of vascular tree | 9.37e-33 | 24 |
meso-epithelial cell | 2.46e-31 | 45 |
mesodermal cell | 1.63e-30 | 121 |
blood vessel endothelial cell | 3.32e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.32e-29 | 18 |
lining cell | 3.97e-28 | 58 |
barrier cell | 3.97e-28 | 58 |
endothelial cell of artery | 2.20e-19 | 9 |
embryonic cell | 1.84e-16 | 250 |
aortic endothelial cell | 3.82e-13 | 6 |
squamous epithelial cell | 4.53e-11 | 63 |
kidney cortical cell | 3.80e-08 | 12 |
renal cortical epithelial cell | 3.80e-08 | 12 |
capillary endothelial cell | 3.86e-08 | 3 |
glomerular cell | 6.47e-08 | 7 |
kidney corpuscule cell | 6.47e-08 | 7 |
epithelial cell | 1.25e-07 | 253 |
glomerular endothelial cell | 1.72e-07 | 5 |