FFCP PHASE1:Mm9::chr18:56628862..56628868,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107022 | |EntrezGene=107022 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |MCL_coexpression_id=122 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CAP5 | |UniProt=Q8CAP5 | ||
|association_with_transcript=-52bp_to_uc008eym.1_5end | |association_with_transcript=-52bp_to_uc008eym.1_5end | ||
|cluster_id=chr18:56628862..56628868,+ | |||
|description=CAGE_peak_7_at_Gramd3_5end | |description=CAGE_peak_7_at_Gramd3_5end | ||
|id=chr18:56628862..56628868,+ | |id=chr18:56628862..56628868,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.23e-11!9;CL:0000789!6.23e-11!9;CL:0002420!6.23e-11!9;CL:0002419!6.23e-11!9;CL:0000790!6.23e-11!9;CL:0000542!7.38e-10!13;CL:0000051!7.38e-10!13;CL:0000624!9.30e-10!8;CL:0000838!1.89e-09!12;CL:0000084!2.09e-08!11;CL:0000827!2.09e-08!11;CL:0002031!5.30e-08!25;CL:0000893!1.50e-07!6;CL:0002489!1.50e-07!6;CL:0000898!1.50e-07!6;CL:0000809!1.50e-07!6;CL:0000810!1.50e-07!6;CL:0000895!1.50e-07!6;CL:0000808!1.50e-07!6;CL:0000894!1.50e-07!6;CL:0000806!1.50e-07!6;CL:0000807!1.50e-07!6;CL:0000805!1.50e-07!6;CL:0002425!1.50e-07!6;CL:0002436!1.50e-07!6;CL:0002427!1.50e-07!6;CL:0002428!1.50e-07!6;CL:0002429!1.50e-07!6;CL:0002433!1.50e-07!6;CL:0002431!1.50e-07!6;CL:0002432!1.50e-07!6 | |ontology_enrichment_celltype=CL:0000791!6.23e-11!9;CL:0000789!6.23e-11!9;CL:0002420!6.23e-11!9;CL:0002419!6.23e-11!9;CL:0000790!6.23e-11!9;CL:0000542!7.38e-10!13;CL:0000051!7.38e-10!13;CL:0000624!9.30e-10!8;CL:0000838!1.89e-09!12;CL:0000084!2.09e-08!11;CL:0000827!2.09e-08!11;CL:0002031!5.30e-08!25;CL:0000893!1.50e-07!6;CL:0002489!1.50e-07!6;CL:0000898!1.50e-07!6;CL:0000809!1.50e-07!6;CL:0000810!1.50e-07!6;CL:0000895!1.50e-07!6;CL:0000808!1.50e-07!6;CL:0000894!1.50e-07!6;CL:0000806!1.50e-07!6;CL:0000807!1.50e-07!6;CL:0000805!1.50e-07!6;CL:0002425!1.50e-07!6;CL:0002436!1.50e-07!6;CL:0002427!1.50e-07!6;CL:0002428!1.50e-07!6;CL:0002429!1.50e-07!6;CL:0002433!1.50e-07!6;CL:0002431!1.50e-07!6;CL:0002432!1.50e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.54e-24,9;CL:0000789,4.54e-24,9;CL:0002420,4.54e-24,9;CL:0002419,4.54e-24,9;CL:0000790,4.54e-24,9;CL:0000838,6.26e-22,12;CL:0000624,3.04e-21,8;CL:0000542,4.35e-20,13;CL:0000051,4.35e-20,13;CL:0000084,2.19e-19,11;CL:0000827,2.19e-19,11;CL:0002031,2.84e-19,25;CL:0000893,6.02e-16,6;CL:0002489,6.02e-16,6;CL:0000898,6.02e-16,6;CL:0000809,6.02e-16,6;CL:0000810,6.02e-16,6;CL:0000895,6.02e-16,6;CL:0000808,6.02e-16,6;CL:0000894,6.02e-16,6;CL:0000806,6.02e-16,6;CL:0000807,6.02e-16,6;CL:0000805,6.02e-16,6;CL:0002425,6.02e-16,6;CL:0002436,6.02e-16,6;CL:0002427,6.02e-16,6;CL:0002428,6.02e-16,6;CL:0002429,6.02e-16,6;CL:0002433,6.02e-16,6;CL:0002431,6.02e-16,6;CL:0002432,6.02e-16,6;CL:0000738,6.93e-15,17;CL:0002087,6.93e-15,17;CL:0000988,2.29e-14,32;CL:0002032,2.29e-14,32;CL:0000037,2.29e-14,32;CL:0000837,2.29e-14,32;CL:0002320,4.73e-09,46;CL:0000134,4.73e-09,46;CL:0000553,1.06e-07,6;CL:0000556,1.06e-07,6;CL:0000219,2.89e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.13e-16!29;UBERON:0001007!2.56e-16!128;UBERON:0001555!2.56e-16!128;UBERON:0007026!2.56e-16!128;UBERON:0002193!8.99e-16!48;UBERON:0004119!9.09e-16!130;UBERON:0000925!9.09e-16!130;UBERON:0006595!9.09e-16!130;UBERON:0004921!2.69e-15!126;UBERON:0004185!2.69e-15!126;UBERON:0002370!7.04e-15!23;UBERON:0000974!7.04e-15!23;UBERON:0004807!7.04e-15!23;UBERON:0005058!7.04e-15!23;UBERON:0003351!7.04e-15!23;UBERON:0009113!7.04e-15!23;UBERON:0003295!7.04e-15!23;UBERON:0009722!7.04e-15!23;UBERON:0005562!7.04e-15!23;UBERON:0007690!7.04e-15!23;UBERON:0000072!1.21e-14!27;UBERON:0000065!5.20e-14!41;UBERON:0006562!5.74e-14!24;UBERON:0003408!5.74e-14!24;UBERON:0001557!5.74e-14!24;UBERON:0001042!5.74e-14!24;UBERON:0008814!5.74e-14!24;UBERON:0009145!5.74e-14!24;UBERON:0002390!9.47e-14!45;UBERON:0003061!9.47e-14!45;UBERON:0001004!1.89e-13!42;UBERON:0000063!1.29e-10!35;UBERON:0001041!1.51e-09!92;UBERON:0000077!5.50e-09!97;UBERON:0002405!6.39e-09!70;UBERON:0005911!1.63e-08!69;UBERON:0005057!1.60e-07!51;UBERON:0005409!1.83e-07!59;UBERON:0003929!2.00e-07!55 | |ontology_enrichment_uberon=UBERON:0004177!1.13e-16!29;UBERON:0001007!2.56e-16!128;UBERON:0001555!2.56e-16!128;UBERON:0007026!2.56e-16!128;UBERON:0002193!8.99e-16!48;UBERON:0004119!9.09e-16!130;UBERON:0000925!9.09e-16!130;UBERON:0006595!9.09e-16!130;UBERON:0004921!2.69e-15!126;UBERON:0004185!2.69e-15!126;UBERON:0002370!7.04e-15!23;UBERON:0000974!7.04e-15!23;UBERON:0004807!7.04e-15!23;UBERON:0005058!7.04e-15!23;UBERON:0003351!7.04e-15!23;UBERON:0009113!7.04e-15!23;UBERON:0003295!7.04e-15!23;UBERON:0009722!7.04e-15!23;UBERON:0005562!7.04e-15!23;UBERON:0007690!7.04e-15!23;UBERON:0000072!1.21e-14!27;UBERON:0000065!5.20e-14!41;UBERON:0006562!5.74e-14!24;UBERON:0003408!5.74e-14!24;UBERON:0001557!5.74e-14!24;UBERON:0001042!5.74e-14!24;UBERON:0008814!5.74e-14!24;UBERON:0009145!5.74e-14!24;UBERON:0002390!9.47e-14!45;UBERON:0003061!9.47e-14!45;UBERON:0001004!1.89e-13!42;UBERON:0000063!1.29e-10!35;UBERON:0001041!1.51e-09!92;UBERON:0000077!5.50e-09!97;UBERON:0002405!6.39e-09!70;UBERON:0005911!1.63e-08!69;UBERON:0005057!1.60e-07!51;UBERON:0005409!1.83e-07!59;UBERON:0003929!2.00e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.42e-29,29;UBERON:0005057,2.42e-29,29;UBERON:0002193,1.13e-27,48;UBERON:0002405,1.13e-27,48;UBERON:0002390,5.29e-27,45;UBERON:0003061,5.29e-27,45;UBERON:0002370,1.18e-26,23;UBERON:0000974,1.18e-26,23;UBERON:0004807,1.18e-26,23;UBERON:0005058,1.18e-26,23;UBERON:0003351,1.18e-26,23;UBERON:0009113,1.18e-26,23;UBERON:0003295,1.18e-26,23;UBERON:0009722,1.18e-26,23;UBERON:0005562,1.18e-26,23;UBERON:0007690,1.18e-26,23;UBERON:0006562,2.15e-25,24;UBERON:0003408,2.15e-25,24;UBERON:0001557,2.15e-25,24;UBERON:0001042,2.15e-25,24;UBERON:0008814,2.15e-25,24;UBERON:0009145,2.15e-25,24;UBERON:0000072,5.57e-25,27;UBERON:0000077,1.41e-23,35;UBERON:0007811,9.88e-16,36;UBERON:0000065,3.78e-15,41;UBERON:0001004,1.07e-14,42;UBERON:0003081,9.20e-13,87;UBERON:0000153,1.36e-12,43;UBERON:0001041,4.72e-10,80;UBERON:0003929,4.38e-09,55;UBERON:0002384,4.73e-09,46;UBERON:0000926,9.92e-09,120;UBERON:0004120,9.92e-09,120;UBERON:0006603,9.92e-09,120;UBERON:0002368,4.83e-08,60;UBERON:0002530,3.64e-07,65;UBERON:0000949,4.61e-07,72;UBERON:0000490,5.26e-07,66 | |||
|phase1_expression=0,0,0.454999239389536,0.90739263392049,0,0.33575854382378,0.467225281191051,3.48632973292256,2.81577444303333,3.27690336850791,1.19852577757853,1.03703806693937,10.4432445258036,14.5117868015536,1.33243904726265,0.607425802169478,0,5.52058789376916,7.40417941470989,6.79023442876848,0.17008658030214,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,14.5072428402269,15.1242209614109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,1.01343946190039,0.505524445014783,0.34255163915718,7.76813650941515,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.983179888294428,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14461159864296,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22132145037209,0,0,0.753473828018764,1.50363650493128,2.51655990527175,0,0,0,0,0,0,0,0,0,0.404593039154462,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.51968329191118,0.895133478337407,2.38417625737518,2.16351809135944,1.47689527174577,2.52416124870369,2.28620419965,2.31900225814733,3.31356794515158,3.07877893249054,3.62318396762864,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0.454999239389536,0.90739263392049,0,0.33575854382378,0.467225281191051,3.48632973292256,2.81577444303333,3.27690336850791,1.19852577757853,1.03703806693937,10.4432445258036,14.5117868015536,1.33243904726265,0.607425802169478,0,5.52058789376916,7.40417941470989,6.79023442876848,0.17008658030214,0,0,0.319984845586813,0.22940928106717,1.14846392823004,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.87239121202077,14.5072428402269,15.1242209614109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,1.01343946190039,0.505524445014783,0.34255163915718,7.76813650941515,0,0,0,0.230615497256059,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.994782360205754,0.19496408711912,0,0.648414149624083,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.159454768657487,0.983179888294428,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14461159864296,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22132145037209,0,0,0.753473828018764,1.50363650493128,2.51655990527175,0,0,0,0,0,0,0,0,0,0.404593039154462,0.165306911450672,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.308132871494482,0.51968329191118,0.895133478337407,2.38417625737518,2.16351809135944,1.47689527174577,2.52416124870369,2.28620419965,2.31900225814733,3.31356794515158,3.07877893249054,3.62318396762864,0,0,0,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p7@Gramd3 | |short_description=p7@Gramd3 | ||
}} | }} |
Latest revision as of 11:58, 1 October 2015
Short description: | p7@Gramd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gramd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | -52bp_to_uc008eym.1_5end |
EntrezGene: | Gramd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data