FFCP PHASE1:Hg19::chr2:46605104..46605115,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:46605104..46605115,+
|short_description=p@chr2:46605104..46605115,+
|description=CAGE_peak_at_chr2:46605104..46605115,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:46605104..46605115,+ | |||
|description=CAGE_peak_at_chr2:46605104..46605115,+ | |||
|id=chr2:46605104..46605115,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.53e-16;3!CL:0002188;9.69e-10;5!CL:1000746;3.35e-07;7!CL:1000612;3.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.80e-16,3;CL:0002188,1.06e-09,5;CL:1000746,3.56e-07,7;CL:1000612,3.56e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010226;7.88e-13;1!UBERON:0003124;2.46e-12;1!UBERON:0010227;2.46e-12;1!UBERON:0005754;2.46e-12;1!UBERON:0007297;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.32e-12!115;UBERON:0000477!6.86e-11!286;UBERON:0004111!6.63e-08!241;UBERON:0003937!2.05e-07!12;UBERON:0005399!2.05e-07!12;UBERON:0000481!4.17e-07!347;UBERON:0000483!5.45e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.25e-16;3!UBERON:0003124;7.53e-16;3!UBERON:0000920;7.53e-16;3!UBERON:0002084;7.88e-13;1!UBERON:0002082;7.88e-13;1!UBERON:0002079;2.46e-12;1!UBERON:0000998;2.46e-12;1!UBERON:0006868;2.46e-12;1!UBERON:0000074;3.35e-07;7!UBERON:0001229;3.35e-07;7!UBERON:0002081;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.38e-16,3;UBERON:0000920,5.80e-16,3;UBERON:0003124,5.82e-15,7;UBERON:0002084,7.89e-13,1;UBERON:0002082,7.89e-13,1;UBERON:0010226,7.89e-13,1;UBERON:0002079,1.96e-12,1;UBERON:0000998,3.08e-12,1;UBERON:0006868,3.08e-12,1;UBERON:0000080,1.63e-11,9;UBERON:0002120,1.63e-11,9;UBERON:0004875,1.63e-11,9;UBERON:0005721,1.63e-11,9;UBERON:0005754,1.63e-11,9;UBERON:0007297,1.63e-11,9;UBERON:0004876,1.60e-09,11;UBERON:0003887,9.01e-09,12;UBERON:0005631,9.46e-08,14;UBERON:0000158,9.46e-08,14;UBERON:0010532,3.56e-07,7;UBERON:0000074,3.56e-07,7;UBERON:0001229,3.56e-07,7;UBERON:0001230,3.56e-07,7;UBERON:0003220,3.56e-07,7;UBERON:0005749,3.56e-07,7;UBERON:0004199,3.56e-07,7;UBERON:0004209,3.56e-07,7;UBERON:0004198,3.56e-07,7;UBERON:0002081,7.61e-07,2;UBERON:0010227,7.61e-07,2 | |||
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|short_description=p@chr2:46605104..46605115,+ | |||
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Latest revision as of 10:28, 29 July 2015
Short description: | p@chr2:46605104..46605115, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46605104..46605115, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.80e-16 | 3 |
glomerular endothelial cell | 1.06e-09 | 5 |
glomerular cell | 3.56e-07 | 7 |
kidney corpuscule cell | 3.56e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.38e-16 | 3 |
egg chorion | 5.80e-16 | 3 |
chorion | 5.82e-15 | 7 |
heart left ventricle | 7.89e-13 | 1 |
cardiac ventricle | 7.89e-13 | 1 |
future cardiac ventricle | 7.89e-13 | 1 |
left cardiac atrium | 1.96e-12 | 1 |
seminal vesicle | 3.08e-12 | 1 |
seminal fluid secreting gland | 3.08e-12 | 1 |
mesonephros | 1.63e-11 | 9 |
pronephros | 1.63e-11 | 9 |
nephrogenic cord | 1.63e-11 | 9 |
pronephric mesoderm | 1.63e-11 | 9 |
rostral part of nephrogenic cord | 1.63e-11 | 9 |
presumptive pronephric mesoderm | 1.63e-11 | 9 |
urogenital ridge | 1.60e-09 | 11 |
intraembryonic coelom | 9.01e-09 | 12 |
extraembryonic membrane | 9.46e-08 | 14 |
membranous layer | 9.46e-08 | 14 |
primitive nephron | 3.56e-07 | 7 |
renal glomerulus | 3.56e-07 | 7 |
renal corpuscle | 3.56e-07 | 7 |
glomerular capsule | 3.56e-07 | 7 |
metanephric mesenchyme | 3.56e-07 | 7 |
glomerular tuft | 3.56e-07 | 7 |
S-shaped body | 3.56e-07 | 7 |
renal vesicle | 3.56e-07 | 7 |
comma-shaped body | 3.56e-07 | 7 |
cardiac atrium | 7.61e-07 | 2 |
future cardiac atrium | 7.61e-07 | 2 |