FFCP PHASE1:Hg19::chr5:148960902..148960929,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:148960902..148960929,+
|short_description=p3@ARHGEF37
|description=CAGE_peak_3_at_ARHGEF37_5end
|association_with_transcript=-106bp_to_ENST00000333677_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=389337 | |EntrezGene=389337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34430 | |HGNC=34430 | ||
|TSSclassifier=strong | |||
|UniProt=A1IGU5 | |UniProt=A1IGU5 | ||
|association_with_transcript=-106bp_to_ENST00000333677_5end | |||
|cluster_id=chr5:148960902..148960929,+ | |||
|description=CAGE_peak_3_at_ARHGEF37_5end | |||
|id=chr5:148960902..148960929,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-39!115;UBERON:0004111!4.22e-19!241;UBERON:0000477!6.06e-17!286;UBERON:0000468!2.12e-15!659;UBERON:0000467!4.21e-14!625;UBERON:0000480!6.58e-14!626;UBERON:0000481!2.47e-13!347;UBERON:0000483!1.05e-12!309;UBERON:0000064!2.19e-12!219;UBERON:0000119!2.79e-12!312;UBERON:0004121!4.32e-12!169;UBERON:0003075!8.49e-12!86;UBERON:0007284!8.49e-12!86;UBERON:0001049!1.15e-11!57;UBERON:0005068!1.15e-11!57;UBERON:0006241!1.15e-11!57;UBERON:0007135!1.15e-11!57;UBERON:0000033!1.77e-11!123;UBERON:0000153!2.29e-11!129;UBERON:0007811!2.29e-11!129;UBERON:0000924!2.44e-11!173;UBERON:0006601!2.44e-11!173;UBERON:0002050!5.50e-11!605;UBERON:0005423!5.50e-11!605;UBERON:0000922!5.81e-11!612;UBERON:0000025!6.37e-11!194;UBERON:0000062!1.09e-10!511;UBERON:0002346!1.14e-10!90;UBERON:0000923!1.14e-10!604;UBERON:0005291!1.14e-10!604;UBERON:0006598!1.14e-10!604;UBERON:0002532!1.14e-10!604;UBERON:0002616!9.72e-10!59;UBERON:0004119!1.14e-09!169;UBERON:0000925!1.14e-09!169;UBERON:0006595!1.14e-09!169;UBERON:0000955!2.95e-09!69;UBERON:0006238!2.95e-09!69;UBERON:0000475!3.62e-09!365;UBERON:0005743!2.52e-08!86;UBERON:0000073!4.07e-08!94;UBERON:0001016!4.07e-08!94;UBERON:0000161!9.55e-08!35;UBERON:0001017!9.70e-08!82;UBERON:0003080!1.54e-07!42;UBERON:0002780!3.55e-07!41;UBERON:0001890!3.55e-07!41;UBERON:0006240!3.55e-07!41;UBERON:0003056!5.18e-07!61;UBERON:0001007!6.32e-07!155;UBERON:0001555!6.32e-07!155;UBERON:0007026!6.32e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.55e-11;114!UBERON:0004732;2.70e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-42,114;UBERON:0000073,3.44e-09,53;UBERON:0002616,3.44e-09,53;UBERON:0004111,4.31e-09,240;UBERON:0010371,2.01e-08,104;UBERON:0001049,2.54e-08,56;UBERON:0005068,2.54e-08,56;UBERON:0006241,2.54e-08,56;UBERON:0007135,2.54e-08,56;UBERON:0004119,7.85e-08,160;UBERON:0000925,7.85e-08,160;UBERON:0006595,7.85e-08,160;UBERON:0003075,2.57e-07,82;UBERON:0007284,2.57e-07,82;UBERON:0004732,3.22e-07,13;UBERON:0011216,3.68e-07,223 | |||
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| ||
|short_description=p3@ARHGEF37 | |||
}} | }} |
Latest revision as of 01:58, 16 September 2015
Short description: | p3@ARHGEF37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF37_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENST00000333677_5end |
EntrezGene: | ARHGEF37 |
HGNC: | 34430 |
UniProt: | A1IGU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.61e-42 | 114 |
regional part of nervous system | 3.44e-09 | 53 |
regional part of brain | 3.44e-09 | 53 |
anatomical conduit | 4.31e-09 | 240 |
ecto-epithelium | 2.01e-08 | 104 |
neural tube | 2.54e-08 | 56 |
neural rod | 2.54e-08 | 56 |
future spinal cord | 2.54e-08 | 56 |
neural keel | 2.54e-08 | 56 |
endoderm-derived structure | 7.85e-08 | 160 |
endoderm | 7.85e-08 | 160 |
presumptive endoderm | 7.85e-08 | 160 |
neural plate | 2.57e-07 | 82 |
presumptive neural plate | 2.57e-07 | 82 |
segmental subdivision of nervous system | 3.22e-07 | 13 |
organ system subdivision | 3.68e-07 | 223 |