FFCP PHASE1:Hg19::chr7:116346960..116346964,+: Difference between revisions
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|id=chr7:116346960..116346964,+
|short_description=p@chr7:116346960..116346964,+
|description=CAGE_peak_at_chr7:116346960..116346964,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:116346960..116346964,+ | |||
|description=CAGE_peak_at_chr7:116346960..116346964,+ | |||
|id=chr7:116346960..116346964,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.24e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.74e-12;3!CL:0002251;1.42e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.24e-12,3;CL:0002251,1.52e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.18e-34;1!UBERON:0003056;1.96e-12;3!UBERON:0005062;1.50e-09;4!UBERON:0007284;1.50e-09;4 | |||
|ontology_enrichment_disease=DOID:305!1.02e-14!106;DOID:0050687!2.81e-11!143;DOID:14566!1.57e-07!239;DOID:162!5.31e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.18e-34;1!UBERON:0001785;2.18e-34;1!UBERON:0002464;2.18e-34;1!UBERON:0004904;2.18e-34;1!UBERON:0001021;2.18e-34;1!UBERON:0002134;5.97e-34;1!UBERON:0005208;5.97e-34;1!UBERON:0004145;5.97e-34;1!UBERON:0005946;5.97e-34;1!UBERON:0005965;5.97e-34;1!UBERON:0002078;5.97e-34;1!UBERON:0003714;5.96e-18;2!UBERON:0005162;5.96e-18;2!UBERON:0000122;5.96e-18;2!UBERON:0006562;9.86e-18;2!UBERON:0002081;9.86e-18;2!UBERON:0002133;9.86e-18;2!UBERON:0003978;2.74e-12;3!UBERON:0004151;2.74e-12;3!UBERON:0000946;2.74e-12;3!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.84e-34,1;UBERON:0001785,1.84e-34,1;UBERON:0002464,1.84e-34,1;UBERON:0004904,1.84e-34,1;UBERON:0001021,1.84e-34,1;UBERON:0003902,1.84e-34,1;UBERON:0005425,1.84e-34,1;UBERON:0002134,5.05e-34,1;UBERON:0005208,5.05e-34,1;UBERON:0005946,5.05e-34,1;UBERON:0005965,5.05e-34,1;UBERON:0002078,5.05e-34,1;UBERON:0003714,5.48e-18,2;UBERON:0005162,5.48e-18,2;UBERON:0000122,5.48e-18,2;UBERON:0002081,9.07e-18,2;UBERON:0002133,9.07e-18,2;UBERON:0010227,9.07e-18,2;UBERON:0003978,2.59e-12,3;UBERON:0009751,2.59e-12,3;UBERON:0004151,2.59e-12,3;UBERON:0000946,2.59e-12,3;UBERON:0002523,2.59e-12,3;UBERON:0005983,2.59e-12,3;UBERON:0004145,2.59e-12,3;UBERON:0002165,2.59e-12,3;UBERON:0002062,2.59e-12,3;UBERON:0007280,2.59e-12,3;UBERON:0001781,1.12e-09,4;UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6 | |||
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| ||
|short_description=p@chr7:116346960..116346964,+ | |||
}} | }} |
Latest revision as of 05:18, 31 July 2015
Short description: | p@chr7:116346960..116346964, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:116346960..116346964, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.24e-12 | 3 |
epithelial cell of alimentary canal | 1.52e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.84e-34 | 1 |
cranial nerve | 1.84e-34 | 1 |
nerve trunk | 1.84e-34 | 1 |
nerve connecting eye with brain | 1.84e-34 | 1 |
nerve | 1.84e-34 | 1 |
retinal neural layer | 1.84e-34 | 1 |
presumptive neural retina | 1.84e-34 | 1 |
tricuspid valve | 5.05e-34 | 1 |
right atrium valve | 5.05e-34 | 1 |
outflow tract of atrium | 5.05e-34 | 1 |
outflow part of right atrium | 5.05e-34 | 1 |
right cardiac atrium | 5.05e-34 | 1 |
neural tissue | 5.48e-18 | 2 |
multi cell component structure | 5.48e-18 | 2 |
neuron projection bundle | 5.48e-18 | 2 |
cardiac atrium | 9.07e-18 | 2 |
atrioventricular valve | 9.07e-18 | 2 |
future cardiac atrium | 9.07e-18 | 2 |
valve | 2.59e-12 | 3 |
cardiac mesenchyme | 2.59e-12 | 3 |
cardiac chamber | 2.59e-12 | 3 |
cardial valve | 2.59e-12 | 3 |
tunica intima | 2.59e-12 | 3 |
heart layer | 2.59e-12 | 3 |
outflow tract | 2.59e-12 | 3 |
endocardium | 2.59e-12 | 3 |
endocardial cushion | 2.59e-12 | 3 |
presumptive endocardium | 2.59e-12 | 3 |
layer of retina | 1.12e-09 | 4 |
retina | 7.17e-07 | 6 |
photoreceptor array | 7.17e-07 | 6 |
posterior segment of eyeball | 7.17e-07 | 6 |