FFCP PHASE1:Hg19::chr7:23636992..23637074,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:23636992..23637074,+
|short_description=p1@CCDC126
|description=CAGE_peak_1_at_CCDC126_5end
|association_with_transcript=0bp_to_ENST00000307471,ENST0000040...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90693 | |EntrezGene=90693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22398 | |HGNC=22398 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EE4 | |UniProt=Q96EE4 | ||
|association_with_transcript=0bp_to_ENST00000307471,ENST00000409765,ENST00000484553,NM_138771,uc003swl.2,uc003swm.2_5end | |||
|cluster_id=chr7:23636992..23637074,+ | |||
|description=CAGE_peak_1_at_CCDC126_5end | |||
|id=chr7:23636992..23637074,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.24e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.64e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.33e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.47e-29!115;UBERON:0001049!1.36e-20!57;UBERON:0005068!1.36e-20!57;UBERON:0006241!1.36e-20!57;UBERON:0007135!1.36e-20!57;UBERON:0003080!2.97e-17!42;UBERON:0002616!4.06e-17!59;UBERON:0001017!6.07e-17!82;UBERON:0002780!1.28e-16!41;UBERON:0001890!1.28e-16!41;UBERON:0006240!1.28e-16!41;UBERON:0000073!4.22e-16!94;UBERON:0001016!4.22e-16!94;UBERON:0005743!6.18e-16!86;UBERON:0000955!1.68e-15!69;UBERON:0006238!1.68e-15!69;UBERON:0002020!1.97e-13!34;UBERON:0003528!1.97e-13!34;UBERON:0001893!7.56e-13!34;UBERON:0003075!1.64e-12!86;UBERON:0007284!1.64e-12!86;UBERON:0002791!1.69e-12!33;UBERON:0001869!3.22e-12!32;UBERON:0002346!4.40e-12!90;UBERON:0002619!2.29e-10!22;UBERON:0001950!2.36e-09!20;UBERON:0000956!2.65e-09!25;UBERON:0000203!2.65e-09!25;UBERON:0003056!3.43e-09!61;UBERON:0000153!1.64e-07!129;UBERON:0007811!1.64e-07!129;UBERON:0000033!7.28e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.68e-12;41!UBERON:0001890;1.68e-12;41!UBERON:0003528;1.32e-11;34!UBERON:0002020;1.32e-11;34!UBERON:0002791;1.71e-11;32!UBERON:0001869;2.45e-11;32!UBERON:0000073;4.83e-11;53!UBERON:0002616;4.83e-11;53!UBERON:0001893;5.25e-11;34!UBERON:0002619;2.06e-10;22!UBERON:0000956;2.19e-09;25!UBERON:0000203;2.19e-09;25!UBERON:0001950;2.26e-09;20!UBERON:0007023;9.24e-09;114!UBERON:0000955;1.51e-07;68!UBERON:0001017;2.16e-07;75!UBERON:0001016;3.02e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-28,114;UBERON:0001049,5.80e-20,56;UBERON:0005068,5.80e-20,56;UBERON:0006241,5.80e-20,56;UBERON:0007135,5.80e-20,56;UBERON:0000073,2.39e-18,53;UBERON:0002616,2.39e-18,53;UBERON:0002780,1.28e-16,41;UBERON:0001890,1.28e-16,41;UBERON:0003080,1.28e-16,41;UBERON:0006240,1.28e-16,41;UBERON:0001016,1.68e-16,89;UBERON:0001017,2.13e-16,81;UBERON:0000955,5.96e-15,68;UBERON:0006238,5.96e-15,68;UBERON:0003528,1.97e-13,34;UBERON:0002020,1.97e-13,34;UBERON:0001893,7.56e-13,34;UBERON:0002791,2.25e-12,32;UBERON:0001869,3.21e-12,32;UBERON:0003075,3.34e-12,82;UBERON:0007284,3.34e-12,82;UBERON:0002346,9.19e-12,86;UBERON:0002619,2.29e-10,22;UBERON:0011216,1.17e-09,223;UBERON:0001950,2.36e-09,20;UBERON:0000956,2.65e-09,25;UBERON:0000203,2.65e-09,25;UBERON:0003056,3.86e-09,61;UBERON:0010371,8.21e-09,104 | |||
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| ||
|short_description=p1@CCDC126 | |||
}} | }} |
Latest revision as of 21:07, 17 September 2015
Short description: | p1@CCDC126 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC126_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307471, ENST00000409765, ENST00000484553, NM_138771, uc003swl.2, uc003swm.2_5end |
EntrezGene: | CCDC126 |
HGNC: | 22398 |
UniProt: | Q96EE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.64e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-28 | 114 |
neural tube | 5.80e-20 | 56 |
neural rod | 5.80e-20 | 56 |
future spinal cord | 5.80e-20 | 56 |
neural keel | 5.80e-20 | 56 |
regional part of nervous system | 2.39e-18 | 53 |
regional part of brain | 2.39e-18 | 53 |
regional part of forebrain | 1.28e-16 | 41 |
forebrain | 1.28e-16 | 41 |
anterior neural tube | 1.28e-16 | 41 |
future forebrain | 1.28e-16 | 41 |
nervous system | 1.68e-16 | 89 |
central nervous system | 2.13e-16 | 81 |
brain | 5.96e-15 | 68 |
future brain | 5.96e-15 | 68 |
brain grey matter | 1.97e-13 | 34 |
gray matter | 1.97e-13 | 34 |
telencephalon | 7.56e-13 | 34 |
regional part of telencephalon | 2.25e-12 | 32 |
cerebral hemisphere | 3.21e-12 | 32 |
neural plate | 3.34e-12 | 82 |
presumptive neural plate | 3.34e-12 | 82 |
neurectoderm | 9.19e-12 | 86 |
regional part of cerebral cortex | 2.29e-10 | 22 |
organ system subdivision | 1.17e-09 | 223 |
neocortex | 2.36e-09 | 20 |
cerebral cortex | 2.65e-09 | 25 |
pallium | 2.65e-09 | 25 |
pre-chordal neural plate | 3.86e-09 | 61 |
ecto-epithelium | 8.21e-09 | 104 |