FFCP PHASE1:Hg19::chr7:44198877..44198886,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:44198877..44198886,-
|short_description=p4@GCK
|description=CAGE_peak_4_at_GCK_5end
|association_with_transcript=0bp_to_ENST00000345378,NM_033507,NM_033508...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2645 | |EntrezGene=2645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4195 | |HGNC=4195 | ||
|TSSclassifier=strong | |||
|UniProt=P35557 | |UniProt=P35557 | ||
|association_with_transcript=0bp_to_ENST00000345378,NM_033507,NM_033508,uc003tkj.1,uc003tkk.1_5end | |||
|cluster_id=chr7:44198877..44198886,- | |||
|coexpression_cluster_id=C4199 | |||
|description=CAGE_peak_4_at_GCK_5end | |||
|id=chr7:44198877..44198886,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.94e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.80e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.34e-34;1!UBERON:0003056;3.06e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.47e-23!3;UBERON:0005290!1.47e-23!3;UBERON:0010096!1.47e-23!3;UBERON:0005162!1.48e-16!2;UBERON:0000122!1.48e-16!2;UBERON:0000349!2.53e-14!5;UBERON:0007023!4.94e-14!115;UBERON:0001049!7.03e-14!57;UBERON:0005068!7.03e-14!57;UBERON:0006241!7.03e-14!57;UBERON:0007135!7.03e-14!57;UBERON:0003075!2.60e-12!86;UBERON:0007284!2.60e-12!86;UBERON:0002346!1.14e-11!90;UBERON:0000955!4.59e-11!69;UBERON:0006238!4.59e-11!69;UBERON:0002616!5.83e-11!59;UBERON:0000073!6.23e-11!94;UBERON:0001016!6.23e-11!94;UBERON:0001017!6.61e-11!82;UBERON:0005743!2.57e-10!86;UBERON:0002791!4.64e-10!33;UBERON:0001893!9.46e-10!34;UBERON:0004732!9.87e-10!13;UBERON:0000941!2.40e-09!1;UBERON:0004904!2.40e-09!1;UBERON:0002464!2.40e-09!1;UBERON:0001021!2.40e-09!1;UBERON:0001785!2.40e-09!1;UBERON:0000033!2.44e-09!123;UBERON:0002298!3.46e-09!8;UBERON:0003112!4.19e-09!1;UBERON:0000032!4.19e-09!1;UBERON:0005253!4.19e-09!1;UBERON:0003128!4.19e-09!1;UBERON:0002241!4.19e-09!1;UBERON:0001703!4.19e-09!1;UBERON:0004761!4.19e-09!1;UBERON:0009617!4.19e-09!1;UBERON:0002336!6.22e-09!1;UBERON:0001018!6.22e-09!1;UBERON:0002473!6.22e-09!1;UBERON:0005340!6.22e-09!1;UBERON:0002316!6.22e-09!1;UBERON:0003544!6.22e-09!1;UBERON:0001020!6.22e-09!1;UBERON:0005970!6.22e-09!1;UBERON:0002437!6.22e-09!1;UBERON:0001882!7.27e-09!1;UBERON:0005403!7.27e-09!1;UBERON:0000153!8.51e-09!129;UBERON:0007811!8.51e-09!129;UBERON:0002902!1.07e-08!1;UBERON:0009899!1.07e-08!1;UBERON:0002022!1.16e-08!1;UBERON:0003056!1.79e-08!61;UBERON:0003076!2.24e-08!15;UBERON:0003057!2.24e-08!15;UBERON:0002619!5.10e-08!22;UBERON:0002780!5.36e-08!41;UBERON:0001890!5.36e-08!41;UBERON:0006240!5.36e-08!41;UBERON:0003080!8.57e-08!42;UBERON:0001869!1.00e-07!32;UBERON:0002020!2.95e-07!34;UBERON:0003528!2.95e-07!34;UBERON:0004121!3.40e-07!169;UBERON:0000956!4.51e-07!25;UBERON:0000203!4.51e-07!25;UBERON:0000924!5.71e-07!173;UBERON:0006601!5.71e-07!173;UBERON:0002107!7.55e-07!19;UBERON:0006925!7.55e-07!19;UBERON:0008836!7.55e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.34e-34;1!UBERON:0001785;8.34e-34;1!UBERON:0002464;8.34e-34;1!UBERON:0004904;8.34e-34;1!UBERON:0001021;8.34e-34;1!UBERON:0003714;1.17e-17;2!UBERON:0005162;1.17e-17;2!UBERON:0000122;1.17e-17;2!UBERON:0002107;5.83e-08;19!UBERON:0006925;5.83e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.85e-34,1;UBERON:0001785,9.85e-34,1;UBERON:0002464,9.85e-34,1;UBERON:0004904,9.85e-34,1;UBERON:0001021,9.85e-34,1;UBERON:0003902,9.85e-34,1;UBERON:0005425,9.85e-34,1;UBERON:0003714,1.27e-17,2;UBERON:0005162,1.27e-17,2;UBERON:0000122,1.27e-17,2;UBERON:0001781,1.70e-09,4;UBERON:0002107,5.73e-08,19;UBERON:0006925,5.73e-08,19;UBERON:0008836,5.73e-08,19;UBERON:0008835,5.24e-07,22;UBERON:0003894,5.24e-07,22;UBERON:0000966,9.49e-07,6;UBERON:0005388,9.49e-07,6;UBERON:0001802,9.49e-07,6;UBERON:0009854,9.67e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983617892129413,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983617892129413,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@GCK | |||
}} | }} |
Latest revision as of 16:55, 18 September 2015
Short description: | p4@GCK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GCK_5end |
Coexpression cluster: | C4199_Hepatocyte_brain_liver_optic_small_mature_colon |
Association with transcript: | 0bp_to_ENST00000345378, NM_033507, NM_033508, uc003tkj.1, uc003tkk.1_5end |
EntrezGene: | GCK |
HGNC: | 4195 |
UniProt: | P35557 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.80e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.85e-34 | 1 |
cranial nerve | 9.85e-34 | 1 |
nerve trunk | 9.85e-34 | 1 |
nerve connecting eye with brain | 9.85e-34 | 1 |
nerve | 9.85e-34 | 1 |
retinal neural layer | 9.85e-34 | 1 |
presumptive neural retina | 9.85e-34 | 1 |
neural tissue | 1.27e-17 | 2 |
multi cell component structure | 1.27e-17 | 2 |
neuron projection bundle | 1.27e-17 | 2 |
layer of retina | 1.70e-09 | 4 |
liver | 5.73e-08 | 19 |
digestive gland | 5.73e-08 | 19 |
liver bud | 5.73e-08 | 19 |
hepatic diverticulum | 5.24e-07 | 22 |
liver primordium | 5.24e-07 | 22 |
retina | 9.49e-07 | 6 |
photoreceptor array | 9.49e-07 | 6 |
posterior segment of eyeball | 9.49e-07 | 6 |
digestive tract diverticulum | 9.67e-07 | 23 |