FFCP PHASE1:Hg19::chr7:99102267..99102304,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:99102267..99102304,+
|short_description=p2@ZKSCAN5
|description=CAGE_peak_2_at_ZKSCAN5_5end
|association_with_transcript=0bp_to_ENST00000326775,ENST0000045...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23660 | |EntrezGene=23660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12867 | |HGNC=12867 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2L8 | |UniProt=Q9Y2L8 | ||
|association_with_transcript=0bp_to_ENST00000326775,ENST00000451158,NM_145102,uc003uqv.2,uc010lfx.2_5end | |||
|cluster_id=chr7:99102267..99102304,+ | |||
|description=CAGE_peak_2_at_ZKSCAN5_5end | |||
|id=chr7:99102267..99102304,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.99e-15!82;UBERON:0000073!6.09e-15!94;UBERON:0001016!6.09e-15!94;UBERON:0002780!2.38e-14!41;UBERON:0001890!2.38e-14!41;UBERON:0006240!2.38e-14!41;UBERON:0005743!4.45e-14!86;UBERON:0000955!1.31e-13!69;UBERON:0006238!1.31e-13!69;UBERON:0003080!1.32e-13!42;UBERON:0001049!6.37e-13!57;UBERON:0005068!6.37e-13!57;UBERON:0006241!6.37e-13!57;UBERON:0007135!6.37e-13!57;UBERON:0002616!1.88e-11!59;UBERON:0001893!3.55e-11!34;UBERON:0002020!1.22e-10!34;UBERON:0003528!1.22e-10!34;UBERON:0002791!1.37e-10!33;UBERON:0001869!1.59e-10!32;UBERON:0002619!1.70e-08!22;UBERON:0000924!4.61e-08!173;UBERON:0006601!4.61e-08!173;UBERON:0004121!9.74e-08!169;UBERON:0001950!1.92e-07!20;UBERON:0000956!3.54e-07!25;UBERON:0000203!3.54e-07!25;UBERON:0002346!3.85e-07!90;UBERON:0003075!8.02e-07!86;UBERON:0007284!8.02e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.90e-11;41!UBERON:0001890;1.90e-11;41!UBERON:0001893;4.95e-11;34!UBERON:0001869;1.54e-10;32!UBERON:0003528;2.52e-10;34!UBERON:0002020;2.52e-10;34!UBERON:0002791;7.14e-10;32!UBERON:0002619;1.80e-09;22!UBERON:0000073;2.29e-09;53!UBERON:0002616;2.29e-09;53!UBERON:0000955;2.07e-08;68!UBERON:0001950;2.77e-08;20!UBERON:0000956;2.85e-08;25!UBERON:0000203;2.85e-08;25!UBERON:0001017;3.40e-08;75!UBERON:0001016;3.90e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.08e-17,89;UBERON:0001017,9.11e-17,81;UBERON:0000955,4.79e-15,68;UBERON:0006238,4.79e-15,68;UBERON:0002780,5.18e-15,41;UBERON:0001890,5.18e-15,41;UBERON:0003080,5.18e-15,41;UBERON:0006240,5.18e-15,41;UBERON:0001049,2.65e-14,56;UBERON:0005068,2.65e-14,56;UBERON:0006241,2.65e-14,56;UBERON:0007135,2.65e-14,56;UBERON:0000073,4.25e-14,53;UBERON:0002616,4.25e-14,53;UBERON:0001893,1.11e-11,34;UBERON:0003528,4.03e-11,34;UBERON:0002020,4.03e-11,34;UBERON:0001869,5.31e-11,32;UBERON:0002791,1.80e-10,32;UBERON:0002619,4.22e-09,22;UBERON:0004121,1.86e-08,171;UBERON:0000924,1.86e-08,171;UBERON:0006601,1.86e-08,171;UBERON:0001950,5.44e-08,20;UBERON:0002346,1.25e-07,86;UBERON:0003056,1.58e-07,61;UBERON:0000956,1.73e-07,25;UBERON:0000203,1.73e-07,25;UBERON:0010371,1.85e-07,104;UBERON:0003075,1.85e-07,82;UBERON:0007284,1.85e-07,82 | |||
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| ||
|short_description=p2@ZKSCAN5 | |||
}} | }} |
Latest revision as of 15:57, 24 September 2015
Short description: | p2@ZKSCAN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZKSCAN5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000326775, ENST00000451158, NM_145102, uc003uqv.2, uc010lfx.2_5end |
EntrezGene: | ZKSCAN5 |
HGNC: | 12867 |
UniProt: | Q9Y2L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.08e-17 | 89 |
central nervous system | 9.11e-17 | 81 |
brain | 4.79e-15 | 68 |
future brain | 4.79e-15 | 68 |
regional part of forebrain | 5.18e-15 | 41 |
forebrain | 5.18e-15 | 41 |
anterior neural tube | 5.18e-15 | 41 |
future forebrain | 5.18e-15 | 41 |
neural tube | 2.65e-14 | 56 |
neural rod | 2.65e-14 | 56 |
future spinal cord | 2.65e-14 | 56 |
neural keel | 2.65e-14 | 56 |
regional part of nervous system | 4.25e-14 | 53 |
regional part of brain | 4.25e-14 | 53 |
telencephalon | 1.11e-11 | 34 |
brain grey matter | 4.03e-11 | 34 |
gray matter | 4.03e-11 | 34 |
cerebral hemisphere | 5.31e-11 | 32 |
regional part of telencephalon | 1.80e-10 | 32 |
regional part of cerebral cortex | 4.22e-09 | 22 |
ectoderm-derived structure | 1.86e-08 | 171 |
ectoderm | 1.86e-08 | 171 |
presumptive ectoderm | 1.86e-08 | 171 |
neocortex | 5.44e-08 | 20 |
neurectoderm | 1.25e-07 | 86 |
pre-chordal neural plate | 1.58e-07 | 61 |
cerebral cortex | 1.73e-07 | 25 |
pallium | 1.73e-07 | 25 |
ecto-epithelium | 1.85e-07 | 104 |
neural plate | 1.85e-07 | 82 |
presumptive neural plate | 1.85e-07 | 82 |