FFCP PHASE1:Hg19::chr11:60615052..60615066,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28359 | |||
|TSSclassifier=strong | |||
|UniProt=B4DY99 | |||
|association_with_transcript=106bp_to_ENST00000545580_5end | |||
|cluster_id=chr11:60615052..60615066,+ | |||
|description=CAGE_peak_9_at_CCDC86_5end | |||
|id=chr11:60615052..60615066,+ | |||
|ontology_enrichment_celltype=CL:0002603!4.66e-15!3;CL:0000708!2.75e-07!3;CL:0000594!4.46e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002603;3.54e-74;3!CL:0000128;2.31e-32;7!CL:0000126;2.31e-32;7!CL:0000127;2.31e-32;7!CL:0000243;8.35e-14;15!CL:0000125;8.35e-14;15!CL:0000095;1.99e-12;17!CL:0000708;1.14e-09;3!CL:0000594;1.60e-09;3!CL:0002319;6.06e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,3.54e-74,3;CL:0000128,2.31e-32,7;CL:0000126,2.31e-32,7;CL:0000127,2.31e-32,7;CL:0002453,2.31e-32,7;CL:0000243,8.35e-14,15;CL:0000125,8.35e-14,15;CL:0000030,8.35e-14,15;CL:0000339,8.35e-14,15;CL:0000095,1.99e-12,17;CL:0000123,1.99e-12,17;CL:0000708,1.10e-09,3;CL:0000594,1.41e-09,3;CL:0002319,6.06e-09,25 | |||
|ontology_enrichment_development_v019=CL:0000339;8.35e-14;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.99e-20!57;UBERON:0005068!1.99e-20!57;UBERON:0006241!1.99e-20!57;UBERON:0007135!1.99e-20!57;UBERON:0007023!2.06e-19!115;UBERON:0002616!2.58e-17!59;UBERON:0001893!1.88e-15!34;UBERON:0000955!5.01e-14!69;UBERON:0006238!5.01e-14!69;UBERON:0003075!8.97e-14!86;UBERON:0007284!8.97e-14!86;UBERON:0001869!9.03e-14!32;UBERON:0002791!1.94e-13!33;UBERON:0002346!5.62e-13!90;UBERON:0002020!6.75e-13!34;UBERON:0003528!6.75e-13!34;UBERON:0001017!8.21e-13!82;UBERON:0002780!1.84e-12!41;UBERON:0001890!1.84e-12!41;UBERON:0006240!1.84e-12!41;UBERON:0003080!4.10e-12!42;UBERON:0001950!4.36e-12!20;UBERON:0005743!4.81e-12!86;UBERON:0002619!6.32e-11!22;UBERON:0000073!1.50e-10!94;UBERON:0001016!1.50e-10!94;UBERON:0003076!2.31e-10!15;UBERON:0003057!2.31e-10!15;UBERON:0000956!1.61e-09!25;UBERON:0000203!1.61e-09!25;UBERON:0004733!2.39e-09!12;UBERON:0002028!2.39e-09!12;UBERON:0007277!2.39e-09!12;UBERON:0003056!4.59e-09!61;UBERON:0004732!1.32e-08!13;UBERON:0002680!2.03e-08!9;UBERON:0001895!2.03e-08!9;UBERON:0010092!2.03e-08!9;UBERON:0002037!9.89e-08!6;UBERON:0006215!9.89e-08!6;UBERON:0003210!2.75e-07!3;UBERON:0000033!2.78e-07!123;UBERON:0000153!8.92e-07!129;UBERON:0007811!8.92e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.34e-37;6!UBERON:0002680;2.27e-25;9!UBERON:0001895;2.27e-25;9!UBERON:0004733;3.09e-19;12!UBERON:0002028;3.09e-19;12!UBERON:0004732;8.09e-18;13!UBERON:0003210;1.14e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.34e-37,6;UBERON:0006215,1.34e-37,6;UBERON:0002680,2.27e-25,9;UBERON:0001895,2.27e-25,9;UBERON:0010092,2.27e-25,9;UBERON:0004733,3.09e-19,12;UBERON:0002028,3.09e-19,12;UBERON:0007277,3.09e-19,12;UBERON:0004732,8.09e-18,13;UBERON:0003076,1.52e-15,15;UBERON:0003057,1.52e-15,15;UBERON:0003210,1.10e-09,3;UBERON:0000073,8.93e-08,53;UBERON:0002616,8.93e-08,53;UBERON:0001049,2.20e-07,56;UBERON:0005068,2.20e-07,56;UBERON:0006241,2.20e-07,56;UBERON:0007135,2.20e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,1.10808952269109,7.54802557603736,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81245686774226,0,0.80672114403045,0,3.57656445851882,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93356440762893,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,2.8339315265117,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263091094251396,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718639647993729,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@CCDC86 | |||
}} |
Latest revision as of 14:09, 18 September 2015
Short description: | p9@CCDC86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCDC86_5end |
Coexpression cluster: | NA |
Association with transcript: | 106bp_to_ENST00000545580_5end |
EntrezGene: | CCDC86 |
HGNC: | 28359 |
UniProt: | B4DY99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 3.54e-74 | 3 |
oligodendrocyte | 2.31e-32 | 7 |
macroglial cell | 2.31e-32 | 7 |
astrocyte | 2.31e-32 | 7 |
oligodendrocyte precursor cell | 2.31e-32 | 7 |
glial cell (sensu Vertebrata) | 8.35e-14 | 15 |
glial cell | 8.35e-14 | 15 |
glioblast | 8.35e-14 | 15 |
glioblast (sensu Vertebrata) | 8.35e-14 | 15 |
neuron associated cell | 1.99e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.99e-12 | 17 |
leptomeningeal cell | 1.10e-09 | 3 |
skeletal muscle satellite cell | 1.41e-09 | 3 |
neural cell | 6.06e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.34e-37 | 6 |
rhombic lip | 1.34e-37 | 6 |
regional part of metencephalon | 2.27e-25 | 9 |
metencephalon | 2.27e-25 | 9 |
future metencephalon | 2.27e-25 | 9 |
segmental subdivision of hindbrain | 3.09e-19 | 12 |
hindbrain | 3.09e-19 | 12 |
presumptive hindbrain | 3.09e-19 | 12 |
segmental subdivision of nervous system | 8.09e-18 | 13 |
posterior neural tube | 1.52e-15 | 15 |
chordal neural plate | 1.52e-15 | 15 |
blood-cerebrospinal fluid barrier | 1.10e-09 | 3 |
regional part of nervous system | 8.93e-08 | 53 |
regional part of brain | 8.93e-08 | 53 |
neural tube | 2.20e-07 | 56 |
neural rod | 2.20e-07 | 56 |
future spinal cord | 2.20e-07 | 56 |
neural keel | 2.20e-07 | 56 |