FFCP PHASE1:Hg19::chr11:64127789..64127819,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10433 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-169bp_to_ENST00000532885_5end | |||
|cluster_id=chr11:64127789..64127819,+ | |||
|description=CAGE_peak_3_at_RPS6KA4_5end | |||
|id=chr11:64127789..64127819,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.23e-40!42;CL:0000860!3.88e-38!45;CL:0002009!4.90e-36!65;CL:0002194!4.23e-34!63;CL:0000576!4.23e-34!63;CL:0000040!4.23e-34!63;CL:0000559!4.23e-34!63;CL:0000557!8.32e-33!71;CL:0000763!8.10e-30!112;CL:0000049!8.10e-30!112;CL:0000766!2.23e-29!76;CL:0000839!1.09e-28!70;CL:0000037!8.73e-24!172;CL:0000566!8.73e-24!172;CL:0000738!2.43e-21!140;CL:0000988!7.31e-21!182;CL:0002087!2.35e-20!119;CL:0002032!4.72e-20!165;CL:0000837!4.72e-20!165;CL:0002031!1.34e-17!124;CL:0002393!2.39e-10!9;CL:0002397!2.39e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-52;33!CL:0002057;1.52e-52;33!CL:0000576;1.34e-47;48!CL:0000473;6.07e-35;39!CL:0000234;6.07e-35;39!CL:0000766;6.40e-28;69!CL:0000763;1.51e-17;100!CL:0002393;1.97e-16;6!CL:0002397;1.97e-16;6!CL:0002087;8.06e-12;104!CL:0000738;7.33e-11;136!CL:0000784;6.85e-10;3!CL:0000226;3.98e-09;3!CL:0000842;3.98e-09;3!CL:0000451;9.63e-09;10!CL:0000767;1.01e-08;3!CL:0000988;1.48e-07;177!CL:0000840;1.60e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.66e-75,42;CL:0002057,1.66e-75,42;CL:0002009,2.29e-71,61;CL:0000557,4.21e-67,67;CL:0002194,7.65e-67,59;CL:0000576,7.65e-67,59;CL:0000040,7.65e-67,59;CL:0000559,7.65e-67,59;CL:0000473,9.92e-65,48;CL:0000234,9.92e-65,48;CL:0000766,6.37e-62,72;CL:0000839,1.30e-58,66;CL:0000763,7.78e-58,108;CL:0000049,7.78e-58,108;CL:0000037,5.47e-46,168;CL:0000738,3.46e-43,136;CL:0000988,7.03e-43,177;CL:0002087,5.30e-38,115;CL:0002032,2.42e-37,161;CL:0000837,2.42e-37,161;CL:0002031,6.77e-34,120;CL:0002393,2.77e-18,9;CL:0002397,2.77e-18,9;CL:0000134,1.30e-14,354;CL:0002320,4.89e-14,361;CL:0000219,5.11e-12,386;CL:0000048,3.72e-10,427;CL:0000034,6.15e-10,441;CL:0000784,6.90e-10,3;CL:0000723,8.29e-10,433;CL:0000226,3.85e-09,3;CL:0000842,3.85e-09,3;CL:0000767,7.15e-09,3;CL:0000451,1.00e-08,10;CL:0000840,1.68e-07,5;CL:0001029,1.68e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;7.03e-52;42!CL:0000049;3.29e-17;108!UBERON:0006215;5.50e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.67e-37!102;UBERON:0003061!7.67e-37!102;UBERON:0002193!1.29e-35!112;UBERON:0002371!3.94e-28!80;UBERON:0001474!1.03e-24!86;UBERON:0004765!7.41e-20!101;UBERON:0001434!7.41e-20!101;UBERON:0002405!1.34e-19!115;UBERON:0007023!1.04e-13!115;UBERON:0003081!4.09e-11!216;UBERON:0001049!9.94e-11!57;UBERON:0005068!9.94e-11!57;UBERON:0006241!9.94e-11!57;UBERON:0007135!9.94e-11!57;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15;UBERON:0002204!9.82e-09!167;UBERON:0003076!5.95e-08!15;UBERON:0003057!5.95e-08!15;UBERON:0002616!7.31e-08!59;UBERON:0005743!6.25e-07!86;UBERON:0001017!8.60e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-15;15!UBERON:0000179;1.16e-15;15!UBERON:0000463;1.16e-15;15!UBERON:0002390;1.09e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.15e-70,98;UBERON:0003061,3.15e-70,98;UBERON:0002193,1.92e-62,108;UBERON:0002371,1.49e-60,76;UBERON:0001474,2.96e-55,82;UBERON:0004765,2.79e-49,90;UBERON:0002405,2.65e-47,93;UBERON:0001434,3.77e-43,100;UBERON:0003081,7.78e-28,203;UBERON:0002204,3.59e-22,167;UBERON:0000178,6.93e-16,15;UBERON:0000179,6.93e-16,15;UBERON:0000463,6.93e-16,15;UBERON:0002384,2.97e-13,371;UBERON:0000926,5.99e-13,315;UBERON:0004120,5.99e-13,315;UBERON:0006603,5.99e-13,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.382067028739756,0.821005894499457,0.314843125254717,3.14691421479123,1.53531759238885,2.78669021968937,0,0,0,0,0,1.17440175733939,2.21598163412751,1.80490002723128,2.60413044859022,0,0,0,1.30858414901608,0.377875943688809,2.91100873425379,0.929716147622738,1.23350366406548,0.309706370895104,1.43846196161075,1.5369642391746,2.60130452877444,1.37898272294647,1.93645405075148,2.70852973188684,2.07066573496865,1.36453075028923,1.79778787556068,2.14258724659632,1.60464513538047,3.19668562899521,2.30895910130701,1.99463657621632,1.70489900213078,0.870627715885752,1.13477044938228,1.24564449799115,1.00499466102697,1.0429658368404,3.25783267057675,1.21079900526674,1.10483290796269,1.26584954976354,5.28138215779854,6.59073329891635,3.14487968262564,8.42464733598713,10.5123824989054,3.05378614724452,1.14005097496499,0.99458338599545,1.82664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.903450714466637,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,1.56716763569341,0.930705723632056,16.9328343256793,9.72391348326217,15.6012150558417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.468008530278475,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,2.48121631347465,4.96142661882819,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.952927101831156,1.64544909234478,1.94541993357815,2.70015718619057,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,2.2980644415884,2.54008299268659,0,0.842391534340376,0,1.88015874927628,2.50634477090067,0.169291777801603,0,2.01799707191048,0.851692475380653,0.343505344755765,3.99412993600995,4.02616994206349,6.34026738505252,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,7.1620131831762,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,4.20201187738654,4.43321428430321,0.438770794307945,0,0,0,0,1.61394733071642,0,0,0,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.379864775735272,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,1.27746588066972,0,0.262887354279314,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,2.32140586367385,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.443716206147409,0.372578417648301,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0.531459361253452,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,1.41696576325585,0.478901577171454,0.41023272848151,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,1.56215619722769,0.206686796501184,0.317079050969534,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0,0,0,0.543757863814654,0.328863867814245,0.118193840883968,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.437119121007915,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| |||
|short_description=p3@RPS6KA4 | |||
}} |
Latest revision as of 03:23, 19 September 2015
Short description: | p3@RPS6KA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS6KA4_5end |
Coexpression cluster: | NA |
Association with transcript: | -169bp_to_ENST00000532885_5end |
EntrezGene: | RPS6KA4 |
HGNC: | 10433 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.15e-70 | 98 |
blood island | 3.15e-70 | 98 |
hemolymphoid system | 1.92e-62 | 108 |
bone marrow | 1.49e-60 | 76 |
bone element | 2.96e-55 | 82 |
skeletal element | 2.79e-49 | 90 |
immune system | 2.65e-47 | 93 |
skeletal system | 3.77e-43 | 100 |
lateral plate mesoderm | 7.78e-28 | 203 |
musculoskeletal system | 3.59e-22 | 167 |
blood | 6.93e-16 | 15 |
haemolymphatic fluid | 6.93e-16 | 15 |
organism substance | 6.93e-16 | 15 |
connective tissue | 2.97e-13 | 371 |
mesoderm | 5.99e-13 | 315 |
mesoderm-derived structure | 5.99e-13 | 315 |
presumptive mesoderm | 5.99e-13 | 315 |