FFCP PHASE1:Hg19::chr11:65192904..65192915,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30815 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=387bp_to_AF001893_5end | |||
|cluster_id=chr11:65192904..65192915,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_NEAT1_5end | |||
|id=chr11:65192904..65192915,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.07e-42!140;CL:0002031!1.81e-36!124;CL:0002087!2.39e-34!119;CL:0000037!4.97e-33!172;CL:0000566!4.97e-33!172;CL:0002032!8.00e-32!165;CL:0000837!8.00e-32!165;CL:0000988!1.27e-29!182;CL:0000766!9.24e-24!76;CL:0002057!5.20e-20!42;CL:0000839!1.94e-19!70;CL:0000860!5.35e-19!45;CL:0000557!6.20e-19!71;CL:0002009!1.76e-18!65;CL:0002194!1.65e-17!63;CL:0000576!1.65e-17!63;CL:0000040!1.65e-17!63;CL:0000559!1.65e-17!63;CL:0000763!1.00e-16!112;CL:0000049!1.00e-16!112;CL:0000838!2.04e-15!52;CL:0000542!9.44e-15!53;CL:0000051!9.44e-15!53;CL:0000791!6.93e-13!18;CL:0000789!6.93e-13!18;CL:0002420!6.93e-13!18;CL:0002419!6.93e-13!18;CL:0000790!6.93e-13!18;CL:0000084!3.83e-10!25;CL:0000827!3.83e-10!25;CL:0000625!1.57e-08!11;CL:0000094!2.80e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.47e-28;18!CL:0000789;6.47e-28;18!CL:0002419;6.47e-28;18!CL:0000860;3.31e-20;33!CL:0002057;3.31e-20;33!CL:0000625;1.02e-18;11!CL:0000084;1.22e-18;25!CL:0002087;3.95e-16;104!CL:0000473;1.03e-15;39!CL:0000234;1.03e-15;39!CL:0000094;1.23e-15;8!CL:0000542;1.03e-14;53!CL:0000576;1.34e-13;48!CL:0000766;5.49e-13;69!CL:0000624;7.96e-13;6!CL:0000236;1.09e-11;13!CL:0000738;5.23e-11;136!CL:0000081;7.07e-11;11!CL:0000623;2.70e-07;3!CL:0000898;3.95e-07;3!CL:0000763;5.93e-07;100!CL:0000775;6.22e-07;3!CL:0000988;9.49e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.05e-54,136;CL:0002087,1.30e-43,115;CL:0002031,2.08e-42,120;CL:0000037,1.07e-41,168;CL:0002032,7.41e-40,161;CL:0000837,7.41e-40,161;CL:0000988,1.60e-38,177;CL:0000791,5.15e-28,18;CL:0000789,5.15e-28,18;CL:0002420,5.15e-28,18;CL:0002419,5.15e-28,18;CL:0000790,5.15e-28,18;CL:0000766,2.64e-27,72;CL:0000838,5.46e-25,52;CL:0000542,2.43e-24,53;CL:0000051,2.43e-24,53;CL:0000860,5.02e-22,42;CL:0002057,5.02e-22,42;CL:0000473,4.63e-20,48;CL:0000234,4.63e-20,48;CL:0000625,7.93e-19,11;CL:0000084,1.04e-18,25;CL:0000827,1.04e-18,25;CL:0000557,7.10e-18,67;CL:0000839,7.79e-17,66;CL:0000763,1.32e-16,108;CL:0000049,1.32e-16,108;CL:0002009,2.13e-16,61;CL:0002194,9.39e-16,59;CL:0000576,9.39e-16,59;CL:0000040,9.39e-16,59;CL:0000559,9.39e-16,59;CL:0000094,9.80e-16,8;CL:0000624,8.07e-13,6;CL:0000081,6.04e-11,11;CL:0000236,7.53e-11,14;CL:0000134,1.56e-10,354;CL:0002320,5.65e-10,361;CL:0000219,4.81e-08,386;CL:0000623,2.65e-07,3;CL:0000825,2.65e-07,3;CL:0000898,4.04e-07,3;CL:0000775,5.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.47e-28;18!CL:0002057;4.69e-16;42!CL:0000051;1.03e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-23!102;UBERON:0003061!1.76e-23!102;UBERON:0002193!1.81e-21!112;UBERON:0002371!2.69e-15!80;UBERON:0001474!6.39e-13!86;UBERON:0002405!5.87e-12!115;UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0004765!3.64e-08!101;UBERON:0001434!3.64e-08!101;UBERON:0007023!6.48e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-16;15!UBERON:0000179;4.70e-16;15!UBERON:0000463;4.70e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-24,98;UBERON:0003061,1.02e-24,98;UBERON:0002193,3.01e-21,108;UBERON:0000178,4.25e-16,15;UBERON:0000179,4.25e-16,15;UBERON:0000463,4.25e-16,15;UBERON:0002371,9.77e-15,76;UBERON:0001474,4.84e-13,82;UBERON:0002405,1.52e-11,93;UBERON:0004765,3.76e-11,90;UBERON:0001434,3.04e-09,100;UBERON:0002384,3.21e-09,371;UBERON:0003081,1.68e-07,203 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.393553906568396,5.50709987588466,6.52509976765262,2.78669021968937,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,6.09394949385065,5.01361118675354,5.4252717678963,0.447830948479849,1.6194683300949,0.257575567634187,0.872389432677388,0.755751887377619,2.42584061187816,0.929716147622738,0,3.40677007984614,2.01384674625505,0.512321413058201,3.07426898855161,7.23965929546899,3.22742341791913,5.41705946377367,2.82363509313907,1.09162460023138,2.24723484445085,6.73384563215986,4.8139354061414,5.75403413219137,1.31940520074686,0.997318288108159,2.98357325372886,4.35313857942876,0.56738522469114,0,3.51748131359441,2.60741459210101,3.47502151528187,3.02699751316684,3.68277635987565,6.32924774881769,0.845021145247767,0.425208599930087,0.419317291016752,1.12328631146495,0.901061357049038,0.964353520182481,0.570025487482497,0.59675003159727,0.365328307529268,1.75996244461323,1.09227722252426,8.89509253863555,0.853460445133014,1.60158394814405,2.87376219977242,1.98313461835459,3.81621501814146,5.12291672198504,2.93618594685469,6.11637165000366,2.64342657158052,4.48406850385229,1.31692042387539,13.3762643677406,9.43225830597995,10.2800749499755,2.50779743086017,7.17028986593899,11.3627473376336,5.84480185223734,1.44833593950726,9.42738903919479,9.52595746709571,13.8109970520158,1.15282187753108,1.69077151827842,0.493313713811028,0.276350017785848,1.15921234294021,10.0834862950201,9.36392898313996,3.1360657141493,1.58633079776593,8.43085085924227,11.6833331464094,10.6268270648191,2.86708872891687,4.55758417699493,1.90090408889675,4.06552821509986,3.58362511232371,3.74792179657038,3.78843603270427,2.46338399076314,12.0964045934839,8.02320587350522,7.09639579025715,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.263504357079378,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0.17859945656816,0.898117490504679,0,0,0,0.183201743930407,65.8902087180316,62.0448422637321,0,0.496971951695318,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.674338760312407,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0.44024217006613,2.07328115540772,1.44119953416961,1.2624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,4.21667878966063,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,14.3832454947407,10.1344960183973,7.44389610422541,0,0,0,0.167516265334349,0,45.6894284607781,2.99161459204025,47.243368531708,0,0,0,0.207970861530807,0.892144943985809,0.315404830067869,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,4.54889657470352,6.47142602455851,1.28073069364133,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.214840489736547,0,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0.50578890427775,0,0.62962469366128,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,6.08937131078603,7.64637207142375,3.41788312304498,5.47933083552915,6.17043409629291,7.13320642311989,3.7802200606668,3.96562588147135,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.500547425135725,0,0.278406173895242,0,0,0,1.4098700508785,0,0.586032717087576,0.121360521749513,0.445773537109913,0.852408440419239,0.47748896947538,0,0,0,0.281338832821026,0,0.16480387422676,0.422250816255987,0.796991953004279,0,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0.295930216910801,4.7896618469388,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.762760950878299,0.236387681767936,0,0,0,0,0,0,0.774054819518572,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.392125068635479,0,0.37950746544837,0,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.247127877893006,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0.19566461893209,0,1.97292201424695,0,0,1.01098527405581,0.150323419414493,0.207376382794494,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0.343972064943233,0,0.146178634172371,0.246346371159628,0.0969890164884194,0,0.451961481561065,0.137041924646751,0.596143835108969,0.126621591911757,0,0.320635281006135,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0.707082103850386,0,0.104602846312333,0.203996435272644,0.288950589901519,0,0.273810757783986,0,0,0,1.39641200636127,0.458320848023367,0,0.599037001496973,0.858452096273142,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0,0.393709926058995,0.169346664131569,0,0,0,0,0,0.674921674654501,4.6428117273477,0,0,0.315222829196793,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.146552233678082,0,0.258565912723101,0.13223260174269,0.342173675768659,0,0.533937062838473,0.471612915298998,1.65695622138878,0.992332043623902,0,0.121792598380896,0,0.544017803369474,0.5013797880454,0.612691153526923,0,0,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0.124192805882767,0.276697269872462,0.124980407962107,0.303298235083296,0.856396000634902,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0.337884881306145,0,0,0,0.553033744606923,0.974301544196942,0.398594520940089,0.327130788511688,0,0.245772908753719,0,0.79994958341972,0.106691729694141,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0,0.371807292777007,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0.150420656698515,0.20170506870352,0,0.261906694481422,0.327543835020193,0.295712172434091,0.135075169236789,0,0,0,0,1.09651553371436,1.48863353516788,0,0.766574565837572,0.535701835878287,0.336283722218824,0,0.682986574053893,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0.156986185701028,0,0.280272163313789,0,0,0.47775168788705,0.214429632529969,0,0.116241425368125,0,0,0.62164849248911,0,4.14755797088455,0.430227358820278,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,4.53200186031526,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.385870790539723,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0.297046400327086,0,0.169927114687817,0.469919589899268,0.0644578879735772,0.299823467774787,0.357107877211315,0,0.0802413666891683,0,0.917458566809082,0.573358332605805,0,0.135982980381829,0,1.5870805215462,0.371995018166751,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.426467963801962,0.23806443146374,0.322944549180031,0.31037357147929,0.560659312903067,0.12729431655633,1.81905470062397,0.435433495793923,0,0.404112318087525,0.573777643141411,0,0.0814032686109745,0.533636729388577,1.9307228228694,0.0898252021065869,0,0.488965776731466,0,0.665756774185513,0.805095174364105,0.320568492303233 | |||
|short_description=p4@NEAT1 | |||
}} |
Latest revision as of 07:57, 19 September 2015
Short description: | p4@NEAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEAT1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 387bp_to_AF001893_5end |
EntrezGene: | NEAT1 |
HGNC: | 30815 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-24 | 98 |
blood island | 1.02e-24 | 98 |
hemolymphoid system | 3.01e-21 | 108 |
blood | 4.25e-16 | 15 |
haemolymphatic fluid | 4.25e-16 | 15 |
organism substance | 4.25e-16 | 15 |
bone marrow | 9.77e-15 | 76 |
bone element | 4.84e-13 | 82 |
immune system | 1.52e-11 | 93 |
skeletal element | 3.76e-11 | 90 |
skeletal system | 3.04e-09 | 100 |
connective tissue | 3.21e-09 | 371 |
lateral plate mesoderm | 1.68e-07 | 203 |