FFCP PHASE1:Hg19::chr11:89956228..89956250,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26973 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14525 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIF7,E9PIZ4,E9PL00 | |||
|association_with_transcript=0bp_to_ENST00000529402,ENST00000530765,ENST00000533062_5end | |||
|cluster_id=chr11:89956228..89956250,- | |||
|description=CAGE_peak_2_at_CHORDC1_5end | |||
|id=chr11:89956228..89956250,- | |||
|ontology_enrichment_celltype=CL:0002032!1.39e-14!165;CL:0000837!1.39e-14!165;CL:0000037!5.10e-14!172;CL:0000566!5.10e-14!172;CL:0000988!1.61e-12!182;CL:0002031!1.50e-11!124;CL:0002087!1.03e-09!119;CL:0000738!3.77e-09!140;CL:0000542!6.76e-09!53;CL:0000051!6.76e-09!53;CL:0000838!6.95e-09!52;CL:0000763!5.76e-07!112;CL:0000049!5.76e-07!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,6.95e-14,161;CL:0000837,6.95e-14,161;CL:0000037,2.48e-13,168;CL:0000988,2.75e-12,177;CL:0002031,6.86e-11,120;CL:0002087,4.35e-09,115;CL:0000542,6.76e-09,53;CL:0000051,6.76e-09,53;CL:0000838,6.95e-09,52;CL:0000738,1.48e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.08e-12!239;DOID:162!3.13e-12!235;DOID:2531!7.24e-10!51;DOID:0060083!7.24e-10!51;DOID:1240!3.07e-08!39;DOID:8692!1.10e-07!31;DOID:0050686!6.67e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.92e-07;31!DOID:1240;2.92e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.08e-12,239;DOID:162,3.13e-12,235;DOID:2531,7.24e-10,51;DOID:0060083,7.24e-10,51;DOID:1240,3.07e-08,39;DOID:8692,1.10e-07,31;DOID:0050686,6.67e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.16e-13!57;UBERON:0005068!1.16e-13!57;UBERON:0006241!1.16e-13!57;UBERON:0007135!1.16e-13!57;UBERON:0003080!7.80e-13!42;UBERON:0002780!2.35e-12!41;UBERON:0001890!2.35e-12!41;UBERON:0006240!2.35e-12!41;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0001017!2.18e-11!82;UBERON:0005743!7.76e-11!86;UBERON:0002616!1.43e-10!59;UBERON:0000955!2.15e-10!69;UBERON:0006238!2.15e-10!69;UBERON:0002020!5.10e-10!34;UBERON:0003528!5.10e-10!34;UBERON:0001893!5.33e-09!34;UBERON:0002791!6.46e-09!33;UBERON:0002346!1.31e-08!90;UBERON:0001869!1.47e-08!32;UBERON:0003075!8.06e-08!86;UBERON:0007284!8.06e-08!86;UBERON:0007023!1.07e-07!115;UBERON:0002619!9.37e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.19e-09;41!UBERON:0001890;2.19e-09;41!UBERON:0003528;1.41e-08;34!UBERON:0002020;1.41e-08;34!UBERON:0002791;2.10e-08;32!UBERON:0001869;6.15e-08;32!UBERON:0000073;8.45e-08;53!UBERON:0002616;8.45e-08;53!UBERON:0001893;1.45e-07;34!UBERON:0002619;8.73e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.34e-13,56;UBERON:0005068,3.34e-13,56;UBERON:0006241,3.34e-13,56;UBERON:0007135,3.34e-13,56;UBERON:0002780,2.35e-12,41;UBERON:0001890,2.35e-12,41;UBERON:0003080,2.35e-12,41;UBERON:0006240,2.35e-12,41;UBERON:0000073,2.64e-12,53;UBERON:0002616,2.64e-12,53;UBERON:0001016,9.79e-12,89;UBERON:0001017,5.36e-11,81;UBERON:0003528,5.10e-10,34;UBERON:0002020,5.10e-10,34;UBERON:0000955,5.33e-10,68;UBERON:0006238,5.33e-10,68;UBERON:0002791,5.09e-09,32;UBERON:0001893,5.33e-09,34;UBERON:0001869,1.47e-08,32;UBERON:0002346,1.29e-07,86;UBERON:0007023,2.29e-07,114;UBERON:0003075,7.42e-07,82;UBERON:0007284,7.42e-07,82;UBERON:0002619,9.37e-07,22 | |||
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| |||
|short_description=p2@CHORDC1 | |||
}} |
Latest revision as of 00:41, 25 September 2015
Short description: | p2@CHORDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHORDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529402, ENST00000530765, ENST00000533062_5end |
EntrezGene: | CHORDC1 |
HGNC: | 14525 |
UniProt: | E9PIF7E9PIZ4E9PL00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 6.95e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.95e-14 | 161 |
hematopoietic stem cell | 2.48e-13 | 168 |
hematopoietic cell | 2.75e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 6.86e-11 | 120 |
nongranular leukocyte | 4.35e-09 | 115 |
lymphocyte | 6.76e-09 | 53 |
common lymphoid progenitor | 6.76e-09 | 53 |
lymphoid lineage restricted progenitor cell | 6.95e-09 | 52 |
leukocyte | 1.48e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.34e-13 | 56 |
neural rod | 3.34e-13 | 56 |
future spinal cord | 3.34e-13 | 56 |
neural keel | 3.34e-13 | 56 |
regional part of forebrain | 2.35e-12 | 41 |
forebrain | 2.35e-12 | 41 |
anterior neural tube | 2.35e-12 | 41 |
future forebrain | 2.35e-12 | 41 |
regional part of nervous system | 2.64e-12 | 53 |
regional part of brain | 2.64e-12 | 53 |
nervous system | 9.79e-12 | 89 |
central nervous system | 5.36e-11 | 81 |
brain grey matter | 5.10e-10 | 34 |
gray matter | 5.10e-10 | 34 |
brain | 5.33e-10 | 68 |
future brain | 5.33e-10 | 68 |
regional part of telencephalon | 5.09e-09 | 32 |
telencephalon | 5.33e-09 | 34 |
cerebral hemisphere | 1.47e-08 | 32 |
neurectoderm | 1.29e-07 | 86 |
adult organism | 2.29e-07 | 114 |
neural plate | 7.42e-07 | 82 |
presumptive neural plate | 7.42e-07 | 82 |
regional part of cerebral cortex | 9.37e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.08e-12 | 239 |
cancer | 3.13e-12 | 235 |
hematologic cancer | 7.24e-10 | 51 |
immune system cancer | 7.24e-10 | 51 |
leukemia | 3.07e-08 | 39 |
myeloid leukemia | 1.10e-07 | 31 |
organ system cancer | 6.67e-07 | 137 |