FFCP PHASE1:Hg19::chr12:120687798..120687841,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9718 | |||
|TSSclassifier=strong | |||
|UniProt=P49023 | |||
|association_with_transcript=115bp_to_uc001txx.2_5end | |||
|cluster_id=chr12:120687798..120687841,- | |||
|coexpression_cluster_id=C3244 | |||
|description=CAGE_peak_11_at_PXN_5end | |||
|id=chr12:120687798..120687841,- | |||
|ontology_enrichment_celltype=CL:0002139!1.24e-14!24;CL:0000115!6.15e-14!35;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0002078!4.71e-10!44;CL:0000213!3.52e-09!57;CL:0000215!3.52e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;9.66e-16;36!CL:0002139;1.39e-14;24!CL:0000071;7.94e-11;18!CL:0002078;6.26e-09;45!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002188;6.49e-07;5!CL:0002577;8.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.67e-18,36;CL:0002078,6.18e-15,45;CL:0002139,1.01e-14,24;CL:0000071,5.93e-11,18;CL:0002546,5.93e-11,18;CL:0000213,4.17e-10,58;CL:0000215,4.17e-10,58;CL:0002188,6.65e-07,5;CL:0002577,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.94e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-39!115;UBERON:0004111!8.22e-16!241;UBERON:0001049!6.91e-13!57;UBERON:0005068!6.91e-13!57;UBERON:0006241!6.91e-13!57;UBERON:0007135!6.91e-13!57;UBERON:0000025!7.88e-13!194;UBERON:0000477!6.39e-12!286;UBERON:0003075!1.14e-10!86;UBERON:0007284!1.14e-10!86;UBERON:0003080!2.22e-10!42;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0002780!1.01e-09!41;UBERON:0001890!1.01e-09!41;UBERON:0006240!1.01e-09!41;UBERON:0002616!1.29e-09!59;UBERON:0002346!1.55e-09!90;UBERON:0000955!4.10e-09!69;UBERON:0006238!4.10e-09!69;UBERON:0000487!1.92e-08!22;UBERON:0001017!3.62e-08!82;UBERON:0000064!3.70e-08!219;UBERON:0002020!6.25e-08!34;UBERON:0003528!6.25e-08!34;UBERON:0000483!7.20e-08!309;UBERON:0005743!7.36e-08!86;UBERON:0000119!8.96e-08!312;UBERON:0001893!1.79e-07!34;UBERON:0002791!3.76e-07!33;UBERON:0002308!7.24e-07!9;UBERON:0000125!7.24e-07!9;UBERON:0003124!7.97e-07!7;UBERON:0006914!9.31e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.94e-11;18!UBERON:0001986;7.94e-11;18!UBERON:0004852;7.94e-11;18!UBERON:0007023;2.77e-09;114!UBERON:0001987;1.98e-08;4!UBERON:0000487;2.48e-08;22!UBERON:0006914;5.30e-07;25!UBERON:0007100;7.00e-07;25!UBERON:0004151;8.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-34,114;UBERON:0004111,4.74e-12,240;UBERON:0004638,5.93e-11,18;UBERON:0001986,5.93e-11,18;UBERON:0004852,5.93e-11,18;UBERON:0000025,1.27e-10,192;UBERON:0004872,7.16e-10,83;UBERON:0003124,1.26e-09,7;UBERON:0003103,1.83e-09,68;UBERON:0000055,2.92e-09,68;UBERON:0001987,1.76e-08,4;UBERON:0004340,1.76e-08,4;UBERON:0000487,1.97e-08,22;UBERON:0001009,4.48e-08,112;UBERON:0005631,2.11e-07,14;UBERON:0000158,2.11e-07,14;UBERON:0002049,2.97e-07,78;UBERON:0007798,2.97e-07,78;UBERON:0004876,3.42e-07,11;UBERON:0007100,3.85e-07,27;UBERON:0006914,4.37e-07,25;UBERON:0000080,6.13e-07,9;UBERON:0002120,6.13e-07,9;UBERON:0004875,6.13e-07,9;UBERON:0005721,6.13e-07,9;UBERON:0005754,6.13e-07,9;UBERON:0007297,6.13e-07,9;UBERON:0004151,8.42e-07,3;UBERON:0001049,8.89e-07,56;UBERON:0005068,8.89e-07,56;UBERON:0006241,8.89e-07,56;UBERON:0007135,8.89e-07,56 | |||
|phase1_expression=0,0,0.422863212287913,1.0007329835313,0,0,0,1.26343974685366,0,0.491467873003018,0,2.40285509343189,2.63766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,1.15076305659177,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0,0.589405839739707,0.364295288292542,0,0,0,0.26591592103773,0,0,0,1.59009925893364,0,1.38856200643038,1.13061588384802,1.67799774483962,0.825354125820202,1.25396979922086,10.0782536076038,16.009481820902,9.70689777017544,2.01414658554573,19.7670747486813,0.976248230192678,7.72092468726324,0.81014194788176,1.69669483739752,2.69435247151404,2.59006405111641,0,2.84779697870439,0.732806975721629,2.63560834872127,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0.936480230490962,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,1.82032272387605,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,8.11971000087113,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.866198686566443,1.38895653772983,0.570762456703795,0,0,0,1.17002132569619,0.594524649154913,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,1.690605505112,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,1.15825045334063,0.205476322550383,0.716243852959582,0.224170287987055,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,3.33440328590885,9.98612637062982,10.8860505598685,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0,2.96836132889982,0.154209693802656,0.355123450626254,0.574890092096664,0.519254429183621,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0.105551628892876,11.3733384070897,15.3084334748864,4.53423423814493,9.25363516141736,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0.614014698904518,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.2594512186427,0,0,0,0.229723400206959,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,6.00683535014765,0,0,0,0.71623345421307,0,0,0,2.81338832821025,0,0,0,2.78947183551498,1.10513566212459,0,0.102268682502155,0.123084805461069,0,0,0,0,3.25523238601881,0,0,0,0.556608588971108,0,0,0,3.62499787717397,0,0,0.236387681767936,0,0,0,2.65722415744152,1.5677537021303,0,0.884634079449797,0,0,0,0,2.23155749661011,0,0,0.179515288819544,0.325942115766024,2.55200927785536,0.0915975934018623,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,3.66618086960175,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0.242780379534093,1.18375320854817,0,0,2.96976924253893,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.39781334593624,0,0,0,0,1.26085721434945,0,4.29363407483012,0,0.19871461170299,0.189932387867636,0,0,0.85381197895741,0,0,0,0,0,18.5136277992494,0,0.67952103036807,1.15063130943567,0.101998217636322,0,0.600420288709789,1.64286454670392,0,0,0,2.23425921017803,3.20824593616357,33.7400321551103,4.79229601197579,11.1598772515508,4.9097720637212,10.0103374005222,0,0,0,0,0,0,0,1.59045937961861,1.90684768556206,0,0,0,0,0,0.303747783290123,0,1.73372556058236,3.77673034571986,0,0,0,5.00286728461357,3.31045985182716,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0.293104467356165,1.32506888912221,2.19781025814636,1.71902382265497,0,0,2.0289608387862,18.5501080017606,0.828478110694391,0,0,0,0,1.08803560673895,3.7603484103405,2.75711019087115,0.655745261419609,0,0,0.732157589411779,2.6290095448365,1.14681839138014,0.998361463831671,1.05563885000352,0,0,0.151649117541648,0,0,0,0,0.597019211547496,0.467426619694449,0.554805861502613,0,0,0,0,0.604923695052956,0,0,0,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0,0,0,0,0,1.60011105865261,0,0,0,2.31143796488764,0,0,0,0,0.97894681802587,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0.844712203265363,0,0.345430341731199,0,2.48865185073115,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,2.23487402680012,0.205116364240755,0,0.414943514785307,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0.198916222116275,2.33152017882697,0,0.781514011233092,0,0,0,0.40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| |||
|short_description=p11@PXN | |||
}} |
Latest revision as of 19:37, 16 September 2015
Short description: | p11@PXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PXN_5end |
Coexpression cluster: | C3244_heart_lung_giant_Endothelial_Renal_Placental_skeletal |
Association with transcript: | 115bp_to_uc001txx.2_5end |
EntrezGene: | PXN |
HGNC: | 9718 |
UniProt: | P49023 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.67e-18 | 36 |
meso-epithelial cell | 6.18e-15 | 45 |
endothelial cell of vascular tree | 1.01e-14 | 24 |
blood vessel endothelial cell | 5.93e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.93e-11 | 18 |
lining cell | 4.17e-10 | 58 |
barrier cell | 4.17e-10 | 58 |
glomerular endothelial cell | 6.65e-07 | 5 |
placental epithelial cell | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-34 | 114 |
anatomical conduit | 4.74e-12 | 240 |
blood vessel endothelium | 5.93e-11 | 18 |
endothelium | 5.93e-11 | 18 |
cardiovascular system endothelium | 5.93e-11 | 18 |
tube | 1.27e-10 | 192 |
splanchnic layer of lateral plate mesoderm | 7.16e-10 | 83 |
chorion | 1.26e-09 | 7 |
compound organ | 1.83e-09 | 68 |
vessel | 2.92e-09 | 68 |
placenta | 1.76e-08 | 4 |
allantois | 1.76e-08 | 4 |
simple squamous epithelium | 1.97e-08 | 22 |
circulatory system | 4.48e-08 | 112 |
extraembryonic membrane | 2.11e-07 | 14 |
membranous layer | 2.11e-07 | 14 |
vasculature | 2.97e-07 | 78 |
vascular system | 2.97e-07 | 78 |
urogenital ridge | 3.42e-07 | 11 |
primary circulatory organ | 3.85e-07 | 27 |
squamous epithelium | 4.37e-07 | 25 |
mesonephros | 6.13e-07 | 9 |
pronephros | 6.13e-07 | 9 |
nephrogenic cord | 6.13e-07 | 9 |
pronephric mesoderm | 6.13e-07 | 9 |
rostral part of nephrogenic cord | 6.13e-07 | 9 |
presumptive pronephric mesoderm | 6.13e-07 | 9 |
cardiac chamber | 8.42e-07 | 3 |
neural tube | 8.89e-07 | 56 |
neural rod | 8.89e-07 | 56 |
future spinal cord | 8.89e-07 | 56 |
neural keel | 8.89e-07 | 56 |