FFCP PHASE1:Hg19::chr12:132379140..132379154,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8408 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12558 | |||
|TSSclassifier=strong | |||
|UniProt=O75385 | |||
|association_with_transcript=-41bp_to_ENST00000321867_5end | |||
|cluster_id=chr12:132379140..132379154,+ | |||
|description=CAGE_peak_3_at_ULK1_5end | |||
|id=chr12:132379140..132379154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.60e-18!115;UBERON:0001049!1.58e-13!57;UBERON:0005068!1.58e-13!57;UBERON:0006241!1.58e-13!57;UBERON:0007135!1.58e-13!57;UBERON:0000955!3.38e-13!69;UBERON:0006238!3.38e-13!69;UBERON:0002780!2.99e-12!41;UBERON:0001890!2.99e-12!41;UBERON:0006240!2.99e-12!41;UBERON:0001017!3.84e-12!82;UBERON:0002616!5.09e-12!59;UBERON:0005743!1.83e-11!86;UBERON:0003080!2.49e-11!42;UBERON:0001869!1.13e-10!32;UBERON:0001893!1.36e-10!34;UBERON:0002020!1.86e-10!34;UBERON:0003528!1.86e-10!34;UBERON:0002791!3.49e-10!33;UBERON:0002346!4.38e-10!90;UBERON:0003075!6.50e-10!86;UBERON:0007284!6.50e-10!86;UBERON:0000062!8.72e-10!511;UBERON:0000073!2.28e-09!94;UBERON:0001016!2.28e-09!94;UBERON:0000468!4.34e-09!659;UBERON:0002619!8.57e-09!22;UBERON:0001950!1.84e-08!20;UBERON:0000956!2.64e-08!25;UBERON:0000203!2.64e-08!25;UBERON:0000033!4.13e-08!123;UBERON:0000153!6.80e-08!129;UBERON:0007811!6.80e-08!129;UBERON:0000924!9.91e-08!173;UBERON:0006601!9.91e-08!173;UBERON:0004121!1.64e-07!169;UBERON:0003056!5.25e-07!61;UBERON:0000922!8.62e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.01e-11;22!UBERON:0001950;1.21e-10;20!UBERON:0001869;7.00e-10;32!UBERON:0001893;1.49e-09;34!UBERON:0003528;2.46e-09;34!UBERON:0002020;2.46e-09;34!UBERON:0000073;3.45e-09;53!UBERON:0002616;3.45e-09;53!UBERON:0002780;3.61e-09;41!UBERON:0001890;3.61e-09;41!UBERON:0002791;5.34e-09;32!UBERON:0000956;8.77e-09;25!UBERON:0000203;8.77e-09;25!UBERON:0000955;1.53e-07;68!UBERON:0001017;1.56e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.08e-17,114;UBERON:0000073,4.21e-16,53;UBERON:0002616,4.21e-16,53;UBERON:0000955,5.33e-16,68;UBERON:0006238,5.33e-16,68;UBERON:0001049,3.76e-15,56;UBERON:0005068,3.76e-15,56;UBERON:0006241,3.76e-15,56;UBERON:0007135,3.76e-15,56;UBERON:0001017,1.88e-13,81;UBERON:0002780,1.01e-12,41;UBERON:0001890,1.01e-12,41;UBERON:0003080,1.01e-12,41;UBERON:0006240,1.01e-12,41;UBERON:0001016,2.63e-11,89;UBERON:0001869,3.51e-11,32;UBERON:0002619,6.64e-11,22;UBERON:0001893,8.49e-11,34;UBERON:0003528,1.21e-10,34;UBERON:0002020,1.21e-10,34;UBERON:0001950,1.78e-10,20;UBERON:0002791,4.89e-10,32;UBERON:0003075,1.13e-09,82;UBERON:0007284,1.13e-09,82;UBERON:0002346,1.66e-09,86;UBERON:0000956,1.08e-08,25;UBERON:0000203,1.08e-08,25;UBERON:0010371,1.39e-08,104;UBERON:0004121,8.29e-08,171;UBERON:0000924,8.29e-08,171;UBERON:0006601,8.29e-08,171;UBERON:0003056,2.31e-07,61 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.704772020479856,0,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,2.40285509343189,1.05506791291381,0.618831764800233,2.31978163009541,0,0.602694528023977,0,0.487932798790507,1.47745269692145,1.63200552995402,1.25381888591235,0.85870796139317,0.958120975510189,0.87879847716362,0.458480434487708,0.492603536699674,0.157421562627358,1.18009283054671,0,1.23852898652861,0,0.90361775633475,1.47901604066715,0,0.568676929949686,0.880801318004542,1.66198622559563,1.00272223735071,1.30206522429511,0.223915474239924,0.647787332037959,0.257575567634187,1.89017710413434,1.88937971844405,2.91100873425379,0,0.411167888021826,0.929119112685311,1.1507695692886,1.0246428261164,0,0.344745680736619,3.22742341791913,0,2.82363509313907,0.545812300115692,0.898893937780338,1.22433556948361,0.641858054152187,1.91801137739712,0.659702600373432,1.79517291859469,0,1.16083695451434,1.13477044938228,1.24564449799115,1.50749199154046,2.08593167368081,0.868755378820466,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.209658645508376,0.561643155732475,0.901061357049038,2.08943262706204,0.855038231223746,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.76171156811282,0.382273228125229,0,0.560508562981536,0.263384084775077,0.393419540227666,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,1.15282187753108,0.650296737799391,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.579297615531196,0,1.34140171940727,0.255725123687061,1.44575660953827,1.00267582127178,1.01392563272577,0,0.973269740605272,1.13441780596881,1.55210578223795,1.49319135678314,1.76821751921912,1.09288586487763,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,1.66943437013739,1.71598473234038,1.85728750664782,0.39752481473341,0,0.347140501607594,0.56530794192401,1.25849830862972,0,0.626984899610432,1.03366703667732,0.35576626268671,0,0.805658634218294,1.52054421143703,0.24406205754817,0.367663080345869,0,0.267899184852239,0.673588117878509,0.788280363383256,1.53316637465883,0,0.183201743930407,2.63560834872127,11.6334079244498,0.872188104285069,0.993943903390637,0,1.05927344650575,0.573673241497627,1.41867352879343,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,0.538842688278752,0.490385709340376,1.21085942115945,1.72852777344,1.40592859100278,0.312160076830321,0.570471821544449,0.149448680551801,0.704606991862589,0.485618833104395,0.280901613404497,0.204154171254893,0.61417158655884,2.16984140469107,0,1.23633464639278,0,3.59309070908119,0.336672227908132,1.00094815897571,0.554128230968366,1.31693286264251,0.919463387397059,1.50238058906597,0.113432183160021,0.717558542755448,0,0.423863802319124,0.600182192168805,0.103052529238439,1.54584324027377,1.11670113798954,0.843881661206331,0.584622030967192,1.00973509697646,0.644349290496095,0.80823028409406,0.710019185033229,0.906768884048762,0.339121184620975,1.15956511897978,1.09098448236334,0.860413786167011,1.34171076742555,1.32529768321485,1.97529702878181,1.65857688024593,2.27088765788066,1.09493207722749,0,1.92972281457866,2.76269842704961,0,0,0.709840800239063,1.18009283054671,0.964044119533928,1.32352767278873,1.30727666455444,1.42362371466658,0.943819157121151,1.17732879075208,0.769494313892781,0,0,1.2347220339942,0,2.53510069643662,1.96565443335525,1.77236972004421,0.441463099414651,0.983907508344908,0.343135620597051,0.98775256867763,0,0.301586917234893,0.740707561268237,0.977424915930974,0,0,0.579652024875384,0.939269553886573,0.144366447761074,0,0.570762456703795,5.53143078571493,4.29243081047436,0.492434012174795,0,0.594524649154913,0,0.839910640994298,0.425325291727159,0,0,1.15014803749563,0,0.528290604079356,1.4512968087854,1.44119953416961,1.00993946741104,0.253991577168676,1.52795370223311,0,0,0,0.300343057843917,0.857479297891735,0.224262168690721,0.43596006883328,0.51336800074665,0.517086863031111,0,0.845302752556,0.797814349754612,3.12022310734098,0,0,0.532844358032199,0.285955987316295,1.08524321078289,2.46972101034231,0.65147236858747,0,0,0.602878754119172,0.871533458600294,0.799783929456456,1.2162378064119,0,0,0.479249710983165,3.44585807502342,0,0.144781306667579,0.821905290201534,0,0.448340575974109,0.394061520403854,0.215627574859517,0.385029108839245,0.254094624222463,2.60279707715243,0.773288812777695,0.670065061337395,0,5.24304916763028,5.9832291840805,3.72973962092432,0.858840442033979,0,0.813795071099207,2.07970861530807,0.892144943985809,0.473107245101804,0.819989904948992,0.300946099727719,0,0,0.664225598535437,0,0.521301686808497,2.54541504701563,2.74514739048685,1.24060815673732,0.647142602455851,0.960548020230999,0.303127571446259,0,1.20956117331872,1.24053903909388,1.53461973288062,1.12264037773229,1.15325234330131,0.511707249066704,0.965123526861645,5.93672265779964,0.462629081407967,0.532685175939381,0.410635780069046,0.519254429183621,0.116210378459959,0.362578348774867,1.40354529212299,0.644566922551274,1.03333003348146,0.546273504020151,0.917870904715969,1.35359883872224,0.693138033939733,1.56869953835371,4.38417673959782,1.16106791782163,0,1.02056223165909,0.431831832204279,7.71136263451447,0.812839312631559,2.50844886927427,0.764628819135115,0,1.56712328305525,1.97333888981341,1.8300481571743,0.512900250232778,0.656029291399411,0,1.13345112812495,1.64825036673018,0.742585499285292,1.14853107599234,1.95018073810956,0,0.773365746336976,0,0.15350367472613,0.689182862422653,0.537101224341368,0,0.255679882248303,1.24644849905432,0.165284915360978,1.92190067365106,1.78657797492418,1.92199783625545,0.464845549297286,0.94443704049192,1.3940745403212,0,1.59691809095107,3.47973196830029,1.48259375283136,0.143124886741991,0.372158369359667,0,0.190630193923825,0.767693373934002,0.42793898803392,0.636406495851874,1.56989728039846,0.359744915166629,0.54907405947211,0.235624804691373,0.606547444719948,1.58510321173008,0.842516912477962,0.48763373908959,0.487426979262569,0,0.409499734223957,1.41405431953713,0,1.10273068709225,0,0.876901770507525,0.578775534266688,1.31178950409327,0,0.30982349809975,0.563391205064483,0.143411352204052,0.392996164052485,0,0.354761064070598,0.422215270595328,0.987884678879706,0,0.699869440489966,0.288666338176536,0,1.08890984861323,1.31801321087491,0.86101074534246,0,0,0.918893600827838,2.53723804616085,1.52927441428475,0.569647187174163,0.952927101831156,0.411362273086194,0.648473311192717,1.62009431171434,2.37937552888281,0.961416640147258,2.88743956579008,1.22520107990516,0.185803175125719,0,1.06712765022621,0.637705090915289,0.59873811429845,0.383010740264733,1.05836791361941,0.649243880549111,0.561594356226918,1.14117339516596,0.156679895773023,2.50634477090067,0.338583555603207,0.481764225311099,0,0.851692475380653,0.343505344755765,0.921722292925374,0.671028323677248,0.667396566847634,0.390776190804081,0.278406173895242,0,0.270455678475983,1.6653598399891,1.4098700508785,0.18714054040822,0.586032717087576,2.6699314784893,1.89453753271713,0.568272293612826,1.67121139316383,0.890894042497916,5.22173193568695,2.98244294329889,2.2507106625682,0.779160935160341,0.329607748453519,1.05562704063997,3.18796781201712,1.38141957765574,1.25966373927138,1.1249555075237,0.738508832766417,0.622079175323615,0.359473404589307,0.358042349351218,0.511572370226872,1.28236427328014,4.7896618469388,0,3.87733098438087,2.04089815956073,1.99613798001194,9.3753993990684,1.04951999995435,0,1.365521379426,1.01701460117107,0.945550727071745,0,0.291604613383254,0.520874984799877,0.885741385813839,7.35638275614988,0,2.87506075821184,2.65992857058193,2.85201016300164,0.32681539055697,0.557694977114413,1.61595542857974,0.341826167541004,1.61394733071642,1.70539524378567,4.56318962072434,0.31900115973192,2.93112298885959,1.5991043280559,0,0.941881538370149,0.166211681900156,0.451191321234361,0.784250137270958,1.1747511088309,0.569261198172555,0.476809736941136,0.421996129056054,0.326465616318295,0.424059214301822,1.08194319871046,0.995261931078505,0.530745387020035,2.4441205797345,0,0.370691816839509,0,1.41542379259422,0.802577647298789,3.04543779442941,0.364909578431332,1.17398771359254,1.21390189767046,1.57833761139756,1.20990716048664,2.44858209304392,1.45329133145522,0.60129367765797,1.24425829676697,5.31723098165748,1.323967823502,1.88359751044335,4.77889719091835,3.13070500632772,0.693373365065693,0.347119476670262,0.783939179315021,0.261177619741208,2.09672001890436,1.37588825977293,0.483781656445426,1.68105429298227,0.821154570532092,1.35784623083787,0.529536760149002,2.25980740780532,0.274083849293502,0.397429223405979,2.53243183823515,1.17330829640882,0.400794101257669,2.13452994739353,1.9980960958213,0.432271251462318,1.14536596165916,0.686379991447858,0,1.24252535565433,2.35694034616795,1.49494626680975,1.77824838730966,1.22397861163586,0.288950589901519,1.20084057741958,1.64286454670392,2.55493176133945,0,2.62887354279315,1.39641200636127,1.60412296808179,0.717873024576814,1.79711100449092,0.429226048136571,2.23171457441873,2.08268764708851,0,1.16495949527454,0.630265458457789,0.164831716762333,0.539228350833479,0.688992370603241,0.338693328263138,1.59045937961861,1.22583065500418,0.964518890790115,0.962776056180637,0,0.2249738915515,0.77380195455795,3.09822738955926,1.0063040627978,0.472834243795189,1.62609223218494,2.00640639386872,3.22717210799121,0.767660789277781,0.714695326373367,0.662091970365432,0.5085370753095,1.08599920350743,0,0.326587360109409,0,0.328370082997356,1.02232813071253,0.339936274560377,1.46552233678082,3.97520666736664,2.71494208359256,1.05786081394152,1.53978154095896,2.81926008926669,2.13574825135389,0.628817220398664,2.07119527673598,0.496166021811951,0.197611631897944,0,0,0.544017803369474,0.2506898940227,2.14441903734423,0.983617892129413,3.61224421375539,0.886068179966986,3.05065662254908,3.004582336956,1.14681839138014,1.33114861844223,1.80079568530012,1.24513771442608,0.624902039810533,0.303298235083296,0.285465333544967,2.11739237728355,1.40500471742064,3.91286777249228,0.597019211547496,0.934853239388898,0.554805861502613,0.947015026375446,1.0062716070103,0.889811221596536,0.686520205190771,0.302461847526478,1.08806040407946,0.591420599958536,0.63718706865481,0,0.310525913752519,0.829412415681711,0.53168342911599,1.04349012362347,0.450772826991655,0,0,0.545545977607678,0.644463342254931,0.464033759878494,1.99047944349308,0.800055529326307,1.37358282073117,2.35724642136143,5.04739592914604,2.50405779529494,1.07220795687463,1.30497145982606,0.906823702049089,0.694567422971502,0.97894681802587,0.537266523244462,0.617602894321944,0.877136198314828,0.176689145945881,0.578742114812744,0.675769762612291,0.256241518587947,0.690860683462397,0.911579868532147,3.04168559533808,0.779441235357554,0.797189041880179,0.490696182767533,0.982829546539238,0.737318726261158,1.69049698686902,0.59996218756479,0.320075189082423,0.344429959321631,1.70254786070051,0.920529751259204,0.419638523158333,0,0.127894371303652,0.431299245586727,0.629063767423586,1.09209638192014,0.509197589862076,2.12574920101683,0.991486114072017,1.67593475391973,0.318004350653419,1.34064966502131,0,1.76337971845342,0.918736432059601,4.62450420694509,0,1.11743701340006,3.89721092057435,1.51243017733031,2.90460460349715,2.58361033010962,0,3.82776102154,0.825788063434183,0.550285795565037,0.693153996902029,1.52552838186867,2.0710797781803,0.596748666348824,0.902523940191087,0.60511520611056,3.12605604493237,1.30953347240711,0,1.47856086217045,2.22874029240702,2.34323429584154,3.30698874401895,4.18544347279785,1.64092442705466,0,1.98484471355718,1.05522746615772,0.255524855279191,1.60710550763486,1.68141861109412,0.606965604236632,3.87025725297206,0.620916591138472,0.230467975111559,1.20041606606193,2.92269851800376,3.09132035745391,0.472775363535873,1.00108261702862,1.56986185701028,9.11270421512811,0.280272163313789,1.82631744101899,0.431855182437243,3.34426181520935,2.43020250200632,0.790068058663633,0.581207126840626,1.73858272302579,3.20684545892101,0.207216164163037,0.6828739083758,4.14755797088455,1.29068207646083,0.354996002191696,0.426067023795788,0.846774100381858,0.9164274741762,0.62041277132864,0.955538938977433,2.12525320415805,0.392600934460972,0,2.58971534875158,4.41450069481862,2.3196288626764,0.485710993059139,1.87151570769685,0.198950775161368,2.14056163399623,1.01651473835064,3.29821550236287,0.905777061400041,0.694567422971502,0.218559560503957,1.88126918544609,1.47088993052343,0.471353094203252,1.37415926980462,0.891139200981258,0.8453114551668,0.679708458751268,0.751871343838829,1.48253142339228,0.999411559249289,2.32120120187355,0.352894871715692,0.561689566824178,3.65168194123259,0.917458566809082,0.716697915757256,1.26217249754548,3.94350643107305,1.74540276136151,0.5290268405154,0,0.462175628631418,0.865253124247578,0.756998549010474,1.09265571963696,0.760191006068622,0.509944148709909,1.06886962106224,0.459474497674225,0.752122617877125,2.34913964476542,2.41167717140561,1.65833887891756,1.24119595034274,1.27940389140589,0.476128862927481,1.22718928688412,2.3588391432426,0.672791175483681,1.01835453245064,1.21270313374932,1.08858373948481,0.684466602170562,0.673520530145875,0.932388670104793,1.33064142618405,0.89543595472072,0.960546112899439,3.8614456457388,1.52702843581198,2.34640942403454,0.977931553462932,2.03448089157869,0,0.603821380773079,0 | |||
|short_description=p3@ULK1 | |||
}} |
Latest revision as of 09:36, 17 September 2015
Short description: | p3@ULK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ULK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000321867_5end |
EntrezGene: | ULK1 |
HGNC: | 12558 |
UniProt: | O75385 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.08e-17 | 114 |
regional part of nervous system | 4.21e-16 | 53 |
regional part of brain | 4.21e-16 | 53 |
brain | 5.33e-16 | 68 |
future brain | 5.33e-16 | 68 |
neural tube | 3.76e-15 | 56 |
neural rod | 3.76e-15 | 56 |
future spinal cord | 3.76e-15 | 56 |
neural keel | 3.76e-15 | 56 |
central nervous system | 1.88e-13 | 81 |
regional part of forebrain | 1.01e-12 | 41 |
forebrain | 1.01e-12 | 41 |
anterior neural tube | 1.01e-12 | 41 |
future forebrain | 1.01e-12 | 41 |
nervous system | 2.63e-11 | 89 |
cerebral hemisphere | 3.51e-11 | 32 |
regional part of cerebral cortex | 6.64e-11 | 22 |
telencephalon | 8.49e-11 | 34 |
brain grey matter | 1.21e-10 | 34 |
gray matter | 1.21e-10 | 34 |
neocortex | 1.78e-10 | 20 |
regional part of telencephalon | 4.89e-10 | 32 |
neural plate | 1.13e-09 | 82 |
presumptive neural plate | 1.13e-09 | 82 |
neurectoderm | 1.66e-09 | 86 |
cerebral cortex | 1.08e-08 | 25 |
pallium | 1.08e-08 | 25 |
ecto-epithelium | 1.39e-08 | 104 |
ectoderm-derived structure | 8.29e-08 | 171 |
ectoderm | 8.29e-08 | 171 |
presumptive ectoderm | 8.29e-08 | 171 |
pre-chordal neural plate | 2.31e-07 | 61 |