FFCP PHASE1:Hg19::chr12:30948622..30948667,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000550292,NR_040245_5end | |||
|cluster_id=chr12:30948622..30948667,+ | |||
|description=CAGE_peak_1_at_LOC100287314_5end | |||
|id=chr12:30948622..30948667,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-26!180;CL:0000220!2.71e-22!246;CL:0002321!1.36e-21!248;CL:0000222!1.94e-18!119;CL:0000548!3.16e-15!679;CL:0000004!3.16e-15!679;CL:0000255!3.16e-15!679;CL:0000057!3.47e-15!75;CL:0000012!1.34e-14!682;CL:0000359!5.92e-14!32;CL:0000192!6.56e-14!42;CL:0000514!6.56e-14!42;CL:0000680!2.30e-13!57;CL:0000056!2.30e-13!57;CL:0000355!2.30e-13!57;CL:0000187!3.59e-13!54;CL:0000183!5.35e-13!59;CL:0000393!3.46e-11!60;CL:0000211!3.46e-11!60;CL:0000144!7.07e-11!625;CL:0000066!3.40e-10!254;CL:0000003!9.51e-10!722;CL:0002371!4.06e-09!591;CL:0000076!5.96e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.21e-14;32!CL:0000192;2.58e-11;43!CL:0000057;4.43e-07;73!CL:0000187;4.75e-07;55!CL:0002494;5.76e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.30e-20,250;CL:0000222,4.58e-18,121;CL:0000057,1.74e-17,76;CL:0000359,3.84e-15,32;CL:0000192,3.89e-15,43;CL:0000514,3.89e-15,43;CL:0000680,2.14e-13,58;CL:0000056,2.14e-13,58;CL:0000355,2.14e-13,58;CL:0000187,3.67e-13,55;CL:0000393,1.22e-10,61;CL:0000211,1.22e-10,61;CL:0000066,2.84e-08,253;CL:0000076,3.48e-07,63;CL:0002494,4.39e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.58e-11;43!CL:0000355;2.67e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.50e-20!79;UBERON:0007798!6.50e-20!79;UBERON:0004872!7.73e-19!84;UBERON:0001981!1.46e-17!60;UBERON:0007500!1.46e-17!60;UBERON:0004537!1.46e-17!60;UBERON:0006965!1.46e-17!60;UBERON:0001637!2.72e-17!42;UBERON:0003509!2.72e-17!42;UBERON:0004572!2.72e-17!42;UBERON:0000119!3.77e-17!312;UBERON:0000483!1.19e-16!309;UBERON:0000055!1.65e-16!69;UBERON:0000475!1.86e-16!365;UBERON:0003914!7.56e-16!118;UBERON:0004535!4.83e-15!110;UBERON:0001009!3.29e-14!113;UBERON:0004573!1.41e-13!33;UBERON:0004571!1.41e-13!33;UBERON:0000025!1.66e-13!194;UBERON:0000477!2.81e-13!286;UBERON:0004111!6.56e-13!241;UBERON:0000486!4.75e-12!82;UBERON:0004290!8.49e-12!70;UBERON:0000914!1.30e-11!83;UBERON:0002329!1.30e-11!83;UBERON:0003077!1.30e-11!83;UBERON:0003059!1.30e-11!83;UBERON:0007282!1.30e-11!83;UBERON:0009618!1.30e-11!83;UBERON:0007285!1.30e-11!83;UBERON:0000481!2.64e-11!347;UBERON:0000467!3.93e-11!625;UBERON:0001134!6.64e-11!61;UBERON:0002036!6.64e-11!61;UBERON:0003082!6.64e-11!61;UBERON:0000480!6.87e-11!626;UBERON:0000490!7.05e-11!138;UBERON:0000468!1.03e-10!659;UBERON:0002385!2.89e-10!63;UBERON:0001015!2.89e-10!63;UBERON:0000383!2.89e-10!63;UBERON:0002100!3.40e-10!216;UBERON:0005256!1.00e-09!143;UBERON:0000947!4.03e-08!21;UBERON:0010191!4.03e-08!21;UBERON:0000923!5.09e-08!604;UBERON:0005291!5.09e-08!604;UBERON:0006598!5.09e-08!604;UBERON:0002532!5.09e-08!604;UBERON:0002050!5.81e-08!605;UBERON:0005423!5.81e-08!605;UBERON:0000922!3.11e-07!612;UBERON:0001048!3.32e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.08e-13;42!UBERON:0003509;3.08e-13;42!UBERON:0004572;3.08e-13;42!UBERON:0004573;4.47e-13;33!UBERON:0004571;4.47e-13;33!UBERON:0007500;9.81e-11;56!UBERON:0001981;9.81e-11;56!UBERON:0004537;9.81e-11;56!UBERON:0000947;1.49e-08;21!UBERON:0010191;1.49e-08;21!UBERON:0003914;3.13e-08;74!UBERON:0002049;4.35e-08;75!UBERON:0007798;4.35e-08;75!UBERON:0000055;8.24e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.52e-19,78;UBERON:0007798,6.52e-19,78;UBERON:0001637,2.65e-18,42;UBERON:0003509,2.65e-18,42;UBERON:0004572,2.65e-18,42;UBERON:0004872,2.89e-18,83;UBERON:0007500,2.85e-17,59;UBERON:0001981,2.85e-17,59;UBERON:0004537,2.85e-17,59;UBERON:0006965,2.85e-17,59;UBERON:0000055,1.88e-15,68;UBERON:0003914,3.11e-15,117;UBERON:0000119,7.94e-15,309;UBERON:0000483,2.46e-14,306;UBERON:0004573,3.07e-14,33;UBERON:0004571,3.07e-14,33;UBERON:0004535,3.07e-14,109;UBERON:0007503,3.60e-13,78;UBERON:0001009,5.05e-13,112;UBERON:0000486,9.32e-13,83;UBERON:0000490,1.04e-12,148;UBERON:0003077,2.99e-12,72;UBERON:0007285,2.99e-12,72;UBERON:0002329,3.47e-12,71;UBERON:0003059,3.47e-12,71;UBERON:0007282,3.47e-12,71;UBERON:0004290,3.47e-12,71;UBERON:0009618,3.47e-12,71;UBERON:0007524,9.03e-12,73;UBERON:0000025,2.09e-11,192;UBERON:0001134,3.42e-11,62;UBERON:0002036,3.42e-11,62;UBERON:0003082,3.42e-11,62;UBERON:0002100,2.78e-10,199;UBERON:0002385,3.17e-10,64;UBERON:0001015,3.17e-10,64;UBERON:0000383,3.17e-10,64;UBERON:0004111,3.45e-10,240;UBERON:0005256,1.07e-09,122;UBERON:0000947,2.66e-08,21;UBERON:0010191,2.66e-08,21 | |||
|phase1_expression=4.72363786103447,1.92690471501885,6.76581139660662,2.00146596706261,0.893922188854576,1.74467704820074,5.06599756336621,3.79031924056099,0.522371256399677,5.40614660303319,2.09340350391728,3.27662058195258,3.69273769519835,0.866364470720326,0,4.70627602516243,9.04041792035965,5.11217063271161,3.41552959153355,3.81675280038043,4.28401451612931,1.88072832886853,0.572471974262113,5.06435372769671,2.00868223351684,0,0,0,0.393364276848904,1.15148819429164,0.619264493264304,11.0330546937471,3.614471025339,4.43704812200145,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0.257575567634187,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0.290209238628584,1.13477044938228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95569624297229,0,0,0,0.127986611154418,0,0.236777252044017,0,1.00803371612366,1.06976078313403,0.868946423296794,4.87613732627923,4.02420515822182,5.88167784480239,1.44575660953827,1.00267582127178,0.724232594804119,2.3858578411533,3.89307896242109,6.23929793282848,9.97782288581538,7.55379156960884,0.654895377488563,6.55731518926576,4.82019775619758,1.9472843619281,0.696518949197069,1.19662164466979,0,0,0,3.57772333260069,0.860234595106124,7.28995053375948,6.21838736116411,2.93649605346934,6.87795104850169,4.38889429727302,0.775250277507987,0.71153252537342,1.00416183829401,3.62546385398232,2.28081631715554,1.46437234528902,2.20597848207521,4.0507097394088,2.14319347881791,2.2452937262617,2.81528701208306,6.13266549863533,5.69559395740877,2.01521918323448,0,0,3.92484646928281,4.47274756525787,8.1043527465331,10.0630977418046,8.89193524321323,11.3493882303474,6.16745360156538,4.2699598291882,11.1000396787722,5.29058760179603,3.90660949002095,3.75962377160955,4.23800797405808,4.60940739583999,2.57753575017176,3.43376084513353,1.71141546463335,3.13842229158782,1.76151747965647,2.75184005425824,1.96631129383148,2.44985005505872,1.59684612505298,1.96318984233954,2.37600571456411,4.45080472701402,19.1133886006986,14.3723628363248,1.34668891163253,1.87677779807946,4.43302584774693,4.38977620880838,3.98434134538726,3.75595147266492,5.89847352432109,3.94657198515496,2.56268866582281,4.02670612203168,6.90209520994125,4.43125875725287,7.21393512127762,5.3973888336161,10.801685263441,6.52827934580031,6.05841058185875,3.77404584433427,4.68773564774555,1.77504796258307,3.42557133973977,3.39121184620975,3.47869535693934,1.63647672354501,2.86804595389004,0,0.132529768321485,0.116193942869518,0.518305275076852,1.00928340350251,0,4.69348596989448,3.21620469096443,5.52539685409922,1.39310378409594,0,0.236613600079688,1.01150814046861,1.68707720918437,0.661763836394364,0.435758888184812,0.474541238222193,0.134831308160164,0.98110732562673,1.15424147083917,3.69077727312324,8.41450642820675,2.8810180793198,4.41026134156626,0,0,0,0,0.368965315629341,4.28919525746314,0.98775256867763,6.74410519545717,1.10581869652794,0.833296006426766,2.28065813717227,4.15973914111831,4.3299402607582,2.43453850447661,9.97973901004484,2.16549671641611,1.38895653772983,0.570762456703795,0,0,0,1.17002132569619,0.297262324577456,3.74935335947108,0.16798212819886,2.97727704209012,2.86587272649115,5.23141089325132,2.68367875415648,1.47798971368783,0.44024217006613,2.69526550203004,2.16179930125442,1.2624243342638,0.126995788584338,0.381988425558278,0,1.71072446022705,0.102827492703324,0.901029173531752,0.571652865261156,2.24262168690721,3.48768055066624,4.6936502925408,9.17829181880222,0,4.22651376278,0.797814349754612,2.08014873822732,2.82928111688356,5.67396528093113,2.93064396917709,1.85871391755592,1.08524321078289,4.93944202068461,2.60588947434988,1.42156779497018,2.37585561880029,6.02878754119172,4.35766729300147,5.49851451501314,0,0,0,3.83399768786532,4.59447743336456,5.70547620162874,1.01346914667305,3.6985738059069,4.29746311775749,0,2.36436912242313,1.2937654491571,3.08023287071396,6.86055485400651,1.30139853857622,0.773288812777695,1.00509759200609,1.27587750330633,0,0,0,0.24538298343828,3.50119364741774,0.542530047399471,1.03985430765404,1.07057393278297,1.73472656537328,3.27995961979597,2.40756879782175,2.27407504055985,1.03473071292505,7.3064815838898,5.34670588770939,1.99832313276591,2.15381273209015,1.02943027143257,0.206768026122887,0,0.213455115606889,2.12189300012382,1.66435439510497,4.23346410661552,5.70647957983187,4.45039722535381,5.61320188866147,10.3792710897118,6.65219423786715,11.2597744800525,5.93672265779964,3.23840356985577,4.26148140751505,6.65229963711854,10.904343012856,3.37010097533882,0,4.41114234667227,2.30202472339741,5.97035130455955,6.19109971222838,2.36023946926963,3.60959690325929,0.616122696835318,0.784349769176855,10.2297457257282,0.949964660035881,3.4120015221269,3.06168669497728,4.10240240594065,7.71136263451447,1.62567862526312,3.01013864312912,1.7841339113152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| |||
|short_description=p1@LOC100287314 | |||
}} |
Latest revision as of 02:53, 18 September 2015
Short description: | p1@LOC100287314 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100287314_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000550292, NR_040245_5end |
EntrezGene: | LOC100287314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.30e-20 | 250 |
mesodermal cell | 4.58e-18 | 121 |
fibroblast | 1.74e-17 | 76 |
vascular associated smooth muscle cell | 3.84e-15 | 32 |
smooth muscle cell | 3.89e-15 | 43 |
smooth muscle myoblast | 3.89e-15 | 43 |
muscle precursor cell | 2.14e-13 | 58 |
myoblast | 2.14e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.14e-13 | 58 |
muscle cell | 3.67e-13 | 55 |
electrically responsive cell | 1.22e-10 | 61 |
electrically active cell | 1.22e-10 | 61 |
epithelial cell | 2.84e-08 | 253 |
squamous epithelial cell | 3.48e-07 | 63 |
cardiocyte | 4.39e-07 | 16 |