FFCP PHASE1:Hg19::chr15:89178835..89178856,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3669 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6130 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_uc002bmu.1_5end | |||
|cluster_id=chr15:89178835..89178856,+ | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_7_at_ISG20_5end | |||
|id=chr15:89178835..89178856,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.54e-49!53;CL:0000051!1.54e-49!53;CL:0000838!2.38e-48!52;CL:0000791!4.83e-28!18;CL:0000789!4.83e-28!18;CL:0002420!4.83e-28!18;CL:0002419!4.83e-28!18;CL:0000790!4.83e-28!18;CL:0002087!3.46e-24!119;CL:0000738!5.42e-24!140;CL:0000084!7.69e-23!25;CL:0000827!7.69e-23!25;CL:0000945!1.58e-22!24;CL:0000826!1.58e-22!24;CL:0000236!9.33e-22!14;CL:0002031!3.77e-19!124;CL:0000625!7.35e-18!11;CL:0000037!3.92e-17!172;CL:0000566!3.92e-17!172;CL:0000988!2.91e-15!182;CL:0002032!2.65e-14!165;CL:0000837!2.65e-14!165;CL:0000624!1.77e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-40;18!CL:0000789;1.33e-40;18!CL:0002419;1.33e-40;18!CL:0000084;2.76e-31;25!CL:0000236;9.94e-29;13!CL:0000542;1.08e-27;53!CL:0000625;6.70e-24;11!CL:0000945;4.16e-19;24!CL:0000624;3.36e-16;6!CL:0000898;1.58e-09;3!CL:0002087;2.77e-09;104!CL:0000226;3.39e-08;3!CL:0000842;3.39e-08;3!CL:0000815;6.39e-07;2!CL:0000792;6.39e-07;2!CL:0002677;6.39e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.04e-49,52;CL:0000542,1.02e-47,53;CL:0000051,1.02e-47,53;CL:0000791,1.03e-40,18;CL:0000789,1.03e-40,18;CL:0002420,1.03e-40,18;CL:0002419,1.03e-40,18;CL:0000790,1.03e-40,18;CL:0000084,2.29e-31,25;CL:0000827,2.29e-31,25;CL:0000236,8.55e-31,14;CL:0002087,6.86e-25,115;CL:0000625,5.65e-24,11;CL:0000738,5.52e-22,136;CL:0002031,2.63e-19,120;CL:0000945,3.81e-19,24;CL:0000826,3.81e-19,24;CL:0000624,3.27e-16,6;CL:0000037,8.46e-16,168;CL:0000988,1.79e-14,177;CL:0002032,6.02e-13,161;CL:0000837,6.02e-13,161;CL:0000898,1.51e-09,3;CL:0000226,4.11e-08,3;CL:0000842,4.11e-08,3;CL:0000815,6.12e-07,2;CL:0000792,6.12e-07,2;CL:0002677,6.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-40;18!CL:0000051;1.08e-27;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.57e-14!15;UBERON:0000179!5.57e-14!15;UBERON:0000463!5.57e-14!15;UBERON:0004177!2.69e-08!7;UBERON:0002370!1.82e-07!4;UBERON:0005058!1.82e-07!4;UBERON:0009113!1.82e-07!4;UBERON:0003295!1.82e-07!4;UBERON:0005562!1.82e-07!4;UBERON:0003408!4.36e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.09e-23;15!UBERON:0000179;8.09e-23;15!UBERON:0000463;8.09e-23;15!UBERON:0002390;1.47e-15;32!UBERON:0002193;7.63e-11;42!UBERON:0004177;1.99e-08;5!UBERON:0005057;1.99e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.06e-23,15;UBERON:0000179,9.06e-23,15;UBERON:0000463,9.06e-23,15;UBERON:0004177,6.49e-13,7;UBERON:0005057,6.49e-13,7;UBERON:0002370,2.86e-11,4;UBERON:0005058,2.86e-11,4;UBERON:0009113,2.86e-11,4;UBERON:0003295,2.86e-11,4;UBERON:0005562,2.86e-11,4;UBERON:0003351,1.67e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,0.542270404062111,1.56386155736164,0.587200878669695,1.10799081706375,0.401088894940283,1.51907609501096,0.223915474239924,1.29557466407592,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.839662001519,18.0225741716503,15.1216573156804,14.0820973446947,19.2190073777286,15.518315878771,15.8650769468367,20.0351288452426,3.41527781465669,2.34894875748376,1.91136614062614,0,0.560508562981536,0.526768169550154,3.34406609193516,3.53709686474248,3.28962398399215,10.8671222003941,16.9479578649467,19.4113600351241,33.1205438293449,4.79064964606246,13.8464776513173,16.1719743046043,15.1650163708409,4.35510487067296,5.72261129263464,6.74195408875072,6.63240042686036,8.11448640058147,17.0529547636369,12.8419597483062,18.8163942848958,5.21222976408804,14.1791582632711,16.8377448286489,11.6389058328971,13.6983128159362,19.5325036156926,21.8603970223126,8.88393202558859,9.59899583658138,9.99445812418767,10.8917535940248,14.7803039445788,2.62088766192152,0.534880391567015,2.31719046212478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0.591092280605782,0.862510299438069,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,3.01999881146064,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,4.58782324285425,5.12682468456746,7.62341681464925,5.34770955012053,5.83625980073446,5.40031437238115,10.3106272918255,0,0,0,0.557409525377156,0.144269212976445,2.34768083049767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0,0.246169610922139,0,0,0,0,0.394573622547734,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,1.82454789215666,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0.314408610199332,0,1.48849806543585,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.31577485171795,1.09578409555081,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,7.4277246311407,7.38689100120709,0,0.0636471582781649,0,0,0.342233301085281,2.02056159043763,0,0.332660356546013,0,0,0,0,0,0,0,0,3.8242020782295,0.320568492303233 | |||
|short_description=p7@ISG20 | |||
}} |
Latest revision as of 15:32, 19 September 2015
Short description: | p7@ISG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ISG20_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | -47bp_to_uc002bmu.1_5end |
EntrezGene: | ISG20 |
HGNC: | 6130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.04e-49 | 52 |
lymphocyte | 1.02e-47 | 53 |
common lymphoid progenitor | 1.02e-47 | 53 |
mature alpha-beta T cell | 1.03e-40 | 18 |
alpha-beta T cell | 1.03e-40 | 18 |
immature T cell | 1.03e-40 | 18 |
mature T cell | 1.03e-40 | 18 |
immature alpha-beta T cell | 1.03e-40 | 18 |
T cell | 2.29e-31 | 25 |
pro-T cell | 2.29e-31 | 25 |
B cell | 8.55e-31 | 14 |
nongranular leukocyte | 6.86e-25 | 115 |
CD8-positive, alpha-beta T cell | 5.65e-24 | 11 |
leukocyte | 5.52e-22 | 136 |
hematopoietic lineage restricted progenitor cell | 2.63e-19 | 120 |
lymphocyte of B lineage | 3.81e-19 | 24 |
pro-B cell | 3.81e-19 | 24 |
CD4-positive, alpha-beta T cell | 3.27e-16 | 6 |
hematopoietic stem cell | 8.46e-16 | 168 |
hematopoietic cell | 1.79e-14 | 177 |
hematopoietic oligopotent progenitor cell | 6.02e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.02e-13 | 161 |
naive T cell | 1.51e-09 | 3 |
single nucleate cell | 4.11e-08 | 3 |
mononuclear cell | 4.11e-08 | 3 |
regulatory T cell | 6.12e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.12e-07 | 2 |
naive regulatory T cell | 6.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 9.06e-23 | 15 |
haemolymphatic fluid | 9.06e-23 | 15 |
organism substance | 9.06e-23 | 15 |
hemopoietic organ | 6.49e-13 | 7 |
immune organ | 6.49e-13 | 7 |
thymus | 2.86e-11 | 4 |
hemolymphoid system gland | 2.86e-11 | 4 |
thymic region | 2.86e-11 | 4 |
pharyngeal gland | 2.86e-11 | 4 |
thymus primordium | 2.86e-11 | 4 |
pharyngeal epithelium | 1.67e-07 | 6 |