FFCP PHASE1:Hg19::chr1:10092993..10093042,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10277 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12500 | |||
|TSSclassifier=strong | |||
|UniProt=A8K8S9,O95155 | |||
|association_with_transcript=0bp_to_ENST00000377157,NM_001105562,NM_006048,uc001aqr.3,uc001aqs.3,uc010oai.1,uc010oaj.1_5end | |||
|cluster_id=chr1:10092993..10093042,+ | |||
|description=CAGE_peak_1_at_UBE4B_5end | |||
|id=chr1:10092993..10093042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.12e-44!115;UBERON:0001049!1.21e-17!57;UBERON:0005068!1.21e-17!57;UBERON:0006241!1.21e-17!57;UBERON:0007135!1.21e-17!57;UBERON:0002616!1.77e-17!59;UBERON:0005743!1.92e-15!86;UBERON:0003075!2.26e-15!86;UBERON:0007284!2.26e-15!86;UBERON:0000955!6.06e-15!69;UBERON:0006238!6.06e-15!69;UBERON:0000153!1.44e-14!129;UBERON:0007811!1.44e-14!129;UBERON:0002780!3.36e-14!41;UBERON:0001890!3.36e-14!41;UBERON:0006240!3.36e-14!41;UBERON:0001017!6.10e-14!82;UBERON:0002346!7.38e-14!90;UBERON:0000033!8.92e-14!123;UBERON:0003080!1.02e-13!42;UBERON:0003056!4.74e-13!61;UBERON:0000073!2.96e-12!94;UBERON:0001016!2.96e-12!94;UBERON:0001893!7.45e-12!34;UBERON:0002020!1.07e-11!34;UBERON:0003528!1.07e-11!34;UBERON:0002791!2.64e-11!33;UBERON:0001869!9.10e-11!32;UBERON:0002619!1.29e-09!22;UBERON:0004121!1.49e-09!169;UBERON:0001950!2.49e-09!20;UBERON:0000924!7.71e-09!173;UBERON:0006601!7.71e-09!173;UBERON:0000956!2.77e-08!25;UBERON:0000203!2.77e-08!25;UBERON:0000477!6.02e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.10e-11;114!UBERON:0000073;7.87e-11;53!UBERON:0002616;7.87e-11;53!UBERON:0001893;3.52e-10;34!UBERON:0002780;3.53e-10;41!UBERON:0001890;3.53e-10;41!UBERON:0003528;6.17e-10;34!UBERON:0002020;6.17e-10;34!UBERON:0002619;1.51e-09;22!UBERON:0001869;1.87e-09;32!UBERON:0002791;2.14e-09;32!UBERON:0001950;2.77e-09;20!UBERON:0000956;3.61e-08;25!UBERON:0000203;3.61e-08;25!UBERON:0000955;1.58e-07;68!UBERON:0001017;4.00e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.09e-43,114;UBERON:0001049,4.10e-18,56;UBERON:0005068,4.10e-18,56;UBERON:0006241,4.10e-18,56;UBERON:0007135,4.10e-18,56;UBERON:0003075,1.42e-17,82;UBERON:0007284,1.42e-17,82;UBERON:0000073,1.74e-17,53;UBERON:0002616,1.74e-17,53;UBERON:0002346,7.57e-16,86;UBERON:0000955,2.73e-15,68;UBERON:0006238,2.73e-15,68;UBERON:0001017,3.15e-14,81;UBERON:0002780,3.36e-14,41;UBERON:0001890,3.36e-14,41;UBERON:0003080,3.36e-14,41;UBERON:0006240,3.36e-14,41;UBERON:0003056,7.00e-14,61;UBERON:0010314,1.07e-12,132;UBERON:0001893,7.45e-12,34;UBERON:0010371,7.50e-12,104;UBERON:0003528,1.07e-11,34;UBERON:0002020,1.07e-11,34;UBERON:0001016,3.94e-11,89;UBERON:0001869,9.10e-11,32;UBERON:0002791,1.04e-10,32;UBERON:0004121,4.20e-10,171;UBERON:0000924,4.20e-10,171;UBERON:0006601,4.20e-10,171;UBERON:0002619,1.29e-09,22;UBERON:0001950,2.49e-09,20;UBERON:0000956,2.77e-08,25;UBERON:0000203,2.77e-08,25;UBERON:0000479,1.54e-07,773 | |||
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| |||
|short_description=p1@UBE4B | |||
}} |
Latest revision as of 04:41, 25 September 2015
Short description: | p1@UBE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UBE4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377157, NM_001105562, NM_006048, uc001aqr.3, uc001aqs.3, uc010oai.1, uc010oaj.1_5end |
EntrezGene: | UBE4B |
HGNC: | 12500 |
UniProt: | A8K8S9O95155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.09e-43 | 114 |
neural tube | 4.10e-18 | 56 |
neural rod | 4.10e-18 | 56 |
future spinal cord | 4.10e-18 | 56 |
neural keel | 4.10e-18 | 56 |
neural plate | 1.42e-17 | 82 |
presumptive neural plate | 1.42e-17 | 82 |
regional part of nervous system | 1.74e-17 | 53 |
regional part of brain | 1.74e-17 | 53 |
neurectoderm | 7.57e-16 | 86 |
brain | 2.73e-15 | 68 |
future brain | 2.73e-15 | 68 |
central nervous system | 3.15e-14 | 81 |
regional part of forebrain | 3.36e-14 | 41 |
forebrain | 3.36e-14 | 41 |
anterior neural tube | 3.36e-14 | 41 |
future forebrain | 3.36e-14 | 41 |
pre-chordal neural plate | 7.00e-14 | 61 |
structure with developmental contribution from neural crest | 1.07e-12 | 132 |
telencephalon | 7.45e-12 | 34 |
ecto-epithelium | 7.50e-12 | 104 |
brain grey matter | 1.07e-11 | 34 |
gray matter | 1.07e-11 | 34 |
nervous system | 3.94e-11 | 89 |
cerebral hemisphere | 9.10e-11 | 32 |
regional part of telencephalon | 1.04e-10 | 32 |
ectoderm-derived structure | 4.20e-10 | 171 |
ectoderm | 4.20e-10 | 171 |
presumptive ectoderm | 4.20e-10 | 171 |
regional part of cerebral cortex | 1.29e-09 | 22 |
neocortex | 2.49e-09 | 20 |
cerebral cortex | 2.77e-08 | 25 |
pallium | 2.77e-08 | 25 |
tissue | 1.54e-07 | 773 |