FFCP PHASE1:Hg19::chr1:8484926..8484950,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=321bp_to_ENST00000488215_5end | |||
|cluster_id=chr1:8484926..8484950,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_39_at_RERE_5end | |||
|id=chr1:8484926..8484950,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.31e-11;1!UBERON:0004140;1.31e-11;1!UBERON:0000358;1.87e-11;1!UBERON:0010226;1.87e-11;1!UBERON:0005062;6.65e-11;4!UBERON:0007284;6.65e-11;4!UBERON:0003104;1.22e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.07e-21;2!DOID:178;1.06e-11;1!DOID:326;1.06e-11;1!DOID:3978;1.06e-11;1!DOID:3394;1.06e-11;1!DOID:5844;1.06e-11;1!DOID:1287;2.48e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.01e-21,2;DOID:178,1.06e-11,1;DOID:326,1.06e-11,1;DOID:3978,1.06e-11,1;DOID:3394,1.06e-11,1;DOID:5844,1.06e-11,1;DOID:1287,2.42e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.06e-60!115;UBERON:0001049!7.98e-28!57;UBERON:0005068!7.98e-28!57;UBERON:0006241!7.98e-28!57;UBERON:0007135!7.98e-28!57;UBERON:0002619!4.96e-24!22;UBERON:0002616!8.98e-23!59;UBERON:0002020!1.79e-22!34;UBERON:0003528!1.79e-22!34;UBERON:0001893!3.40e-22!34;UBERON:0001869!1.12e-21!32;UBERON:0002780!2.03e-21!41;UBERON:0001890!2.03e-21!41;UBERON:0006240!2.03e-21!41;UBERON:0003080!9.06e-21!42;UBERON:0002791!9.61e-21!33;UBERON:0000956!1.04e-20!25;UBERON:0000203!1.04e-20!25;UBERON:0001950!1.50e-20!20;UBERON:0003075!5.46e-20!86;UBERON:0007284!5.46e-20!86;UBERON:0000955!1.89e-19!69;UBERON:0006238!1.89e-19!69;UBERON:0001017!3.30e-19!82;UBERON:0002346!1.08e-18!90;UBERON:0005743!6.38e-18!86;UBERON:0000073!1.99e-15!94;UBERON:0001016!1.99e-15!94;UBERON:0003056!7.31e-14!61;UBERON:0000200!1.89e-13!6;UBERON:0000033!5.06e-13!123;UBERON:0000153!5.48e-13!129;UBERON:0007811!5.48e-13!129;UBERON:0004111!3.36e-12!241;UBERON:0000025!5.83e-12!194;UBERON:0000477!9.41e-11!286;UBERON:0004121!1.35e-10!169;UBERON:0000924!3.98e-10!173;UBERON:0006601!3.98e-10!173;UBERON:0000062!9.72e-10!511;UBERON:0000481!3.71e-09!347;UBERON:0003076!3.42e-08!15;UBERON:0003057!3.42e-08!15;UBERON:0001872!7.70e-08!5;UBERON:0002771!1.53e-07!3;UBERON:0007100!2.33e-07!27;UBERON:0000064!2.67e-07!219;UBERON:0000988!5.35e-07!3;UBERON:0000349!5.78e-07!5;UBERON:0000483!7.64e-07!309;UBERON:0000475!9.20e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.15e-31;25!UBERON:0005090;1.57e-20;2!UBERON:0001630;1.57e-20;2!UBERON:0000948;4.25e-16;22!UBERON:0004151;1.56e-14;3!UBERON:0003978;3.17e-14;3!UBERON:0000946;3.17e-14;3!UBERON:0002079;1.31e-11;1!UBERON:0002084;1.87e-11;1!UBERON:0002146;1.87e-11;1!UBERON:0002082;1.87e-11;1!UBERON:0005623;1.87e-11;1!UBERON:0000996;3.81e-11;1!UBERON:0002135;3.81e-11;1!UBERON:0001389;3.81e-11;1!UBERON:0000026;3.81e-11;1!UBERON:0008784;3.81e-11;1!UBERON:0006058;3.81e-11;1!UBERON:0002426;3.81e-11;1!UBERON:0003831;3.81e-11;1!UBERON:0003898;3.81e-11;1!UBERON:0004830;3.81e-11;1!UBERON:0003663;3.81e-11;1!UBERON:0004256;3.81e-11;1!UBERON:0004708;3.81e-11;1!UBERON:0002101;3.81e-11;1!UBERON:0004709;3.81e-11;1!UBERON:0003830;3.81e-11;1!UBERON:0005175;3.81e-11;1!UBERON:0002529;3.81e-11;1!UBERON:0010538;3.81e-11;1!UBERON:0003661;3.81e-11;1!UBERON:0010890;3.81e-11;1!UBERON:0002471;3.81e-11;1!UBERON:0001774;3.81e-11;1!UBERON:0001383;3.81e-11;1!UBERON:0010758;3.81e-11;1!UBERON:0010707;3.81e-11;1!UBERON:0001103;3.81e-11;1!UBERON:0000978;3.81e-11;1!UBERON:0002103;3.81e-11;1!UBERON:0001665;3.81e-11;1!UBERON:0003823;3.81e-11;1!UBERON:0000154;3.81e-11;1!UBERON:0010709;3.81e-11;1!UBERON:0001872;8.84e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.52e-29,27;UBERON:0005090,1.29e-20,2;UBERON:0001630,1.29e-20,2;UBERON:0007023,5.21e-15,114;UBERON:0000948,1.10e-14,24;UBERON:0005498,1.10e-14,24;UBERON:0004140,1.10e-14,24;UBERON:0009881,1.10e-14,24;UBERON:0004141,1.10e-14,24;UBERON:0003084,1.10e-14,24;UBERON:0007005,1.10e-14,24;UBERON:0004139,1.10e-14,24;UBERON:0004291,1.10e-14,24;UBERON:0004151,1.41e-14,3;UBERON:0003978,4.42e-14,3;UBERON:0009751,4.42e-14,3;UBERON:0000946,4.42e-14,3;UBERON:0002523,4.42e-14,3;UBERON:0005983,4.42e-14,3;UBERON:0002165,4.42e-14,3;UBERON:0002062,4.42e-14,3;UBERON:0007280,4.42e-14,3;UBERON:0003103,1.97e-13,68;UBERON:0002079,1.31e-11,1;UBERON:0002084,1.60e-11,1;UBERON:0002082,1.60e-11,1;UBERON:0010226,1.60e-11,1;UBERON:0002146,2.18e-11,1;UBERON:0005623,2.18e-11,1;UBERON:0000996,2.42e-11,1;UBERON:0002426,2.96e-11,1;UBERON:0003831,2.96e-11,1;UBERON:0003898,2.96e-11,1;UBERON:0004830,2.96e-11,1;UBERON:0003830,2.96e-11,1;UBERON:0005175,2.96e-11,1;UBERON:0001774,2.96e-11,1;UBERON:0001103,2.96e-11,1;UBERON:0010084,2.96e-11,1;UBERON:0005418,4.01e-11,1;UBERON:0001389,4.01e-11,1;UBERON:0000026,4.01e-11,1;UBERON:0008784,4.01e-11,1;UBERON:0006058,4.01e-11,1;UBERON:0003663,4.01e-11,1;UBERON:0004256,4.01e-11,1;UBERON:0004708,4.01e-11,1;UBERON:0002101,4.01e-11,1;UBERON:0004709,4.01e-11,1;UBERON:0002529,4.01e-11,1;UBERON:0010538,4.01e-11,1;UBERON:0003661,4.01e-11,1;UBERON:0010890,4.01e-11,1;UBERON:0002471,4.01e-11,1;UBERON:0001383,4.01e-11,1;UBERON:0004357,4.01e-11,1;UBERON:0004347,4.01e-11,1;UBERON:0005420,4.01e-11,1;UBERON:0005732,4.01e-11,1;UBERON:0010758,4.01e-11,1;UBERON:0010707,4.01e-11,1;UBERON:0000978,4.01e-11,1;UBERON:0002103,4.01e-11,1;UBERON:0001665,4.01e-11,1;UBERON:0003823,4.01e-11,1;UBERON:0000154,4.01e-11,1;UBERON:0010709,4.01e-11,1;UBERON:0005733,4.01e-11,1;UBERON:0005730,4.01e-11,1;UBERON:0002135,5.43e-11,1;UBERON:0001872,8.84e-09,5;UBERON:0010314,2.22e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,1.10579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,2.29160424011684,0,4.19325901047881,9.44297305900456,9.15002975511677,3.09043973438941,0,1.16495949527454,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.236417121897595,0,0.105600336519406,0,0,3.57347663186684,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.122026264901963,1.752673029891,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.798169295285756,0.205116364240755,0,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.202612753855184,1.56215619722769,1.2401207790071,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.460409414939944,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,3.59319823996865,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0.267964130156178,0,0.20686599172379,0.639701945702943,0,0,0,0,0.572824424503484,0,1.52401723527873,0.342233301085281,0.26940821205835,0.0717222053926763,0,0,0,0,0,2.34640942403454,0.244482888365733,0,1.99727032255654,0,0 | |||
|short_description=p39@RERE | |||
}} |
Latest revision as of 11:57, 19 September 2015
Short description: | p39@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_RERE_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 321bp_to_ENST00000488215_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.01e-21 | 2 |
vascular disease | 1.06e-11 | 1 |
ischemia | 1.06e-11 | 1 |
extrinsic cardiomyopathy | 1.06e-11 | 1 |
myocardial ischemia | 1.06e-11 | 1 |
myocardial infarction | 1.06e-11 | 1 |
cardiovascular system disease | 2.42e-11 | 4 |