FFCP PHASE1:Hg19::chr1:85155866..85155880,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=117178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16509 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=91bp_to_uc001dkg.2,uc001dkh.2,uc009wci.2,uc010orz.1_5end | |||
|cluster_id=chr1:85155866..85155880,- | |||
|description=CAGE_peak_8_at_SSX2IP_5end | |||
|id=chr1:85155866..85155880,- | |||
|ontology_enrichment_celltype=CL:0002319!7.59e-10!25 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.11e-14;2!CL:0000242;1.11e-14;2!CL:0000228;3.44e-08;1!CL:0002372;3.44e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.11e-14,2;CL:0000228,2.69e-08,1;CL:0002372,2.69e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.36e-08;1!DOID:4549;1.36e-08;1!DOID:5861;1.36e-08;1!DOID:6496;1.36e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.52e-08,1;DOID:4549,1.52e-08,1;DOID:5861,1.52e-08,1;DOID:6496,1.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.88e-23!82;UBERON:0005743!5.60e-22!86;UBERON:0000073!8.93e-22!94;UBERON:0001016!8.93e-22!94;UBERON:0002780!1.34e-20!41;UBERON:0001890!1.34e-20!41;UBERON:0006240!1.34e-20!41;UBERON:0001893!4.66e-20!34;UBERON:0003080!8.00e-20!42;UBERON:0001869!2.87e-19!32;UBERON:0000955!3.36e-19!69;UBERON:0006238!3.36e-19!69;UBERON:0002791!4.48e-19!33;UBERON:0002020!4.96e-17!34;UBERON:0003528!4.96e-17!34;UBERON:0000956!1.27e-16!25;UBERON:0000203!1.27e-16!25;UBERON:0001049!8.74e-16!57;UBERON:0005068!8.74e-16!57;UBERON:0006241!8.74e-16!57;UBERON:0007135!8.74e-16!57;UBERON:0000924!1.87e-15!173;UBERON:0006601!1.87e-15!173;UBERON:0004121!3.49e-15!169;UBERON:0002616!8.05e-15!59;UBERON:0003056!1.09e-14!61;UBERON:0002619!2.50e-14!22;UBERON:0000033!2.57e-14!123;UBERON:0000153!2.08e-13!129;UBERON:0007811!2.08e-13!129;UBERON:0001950!4.69e-13!20;UBERON:0002346!7.52e-13!90;UBERON:0003075!1.10e-12!86;UBERON:0007284!1.10e-12!86;UBERON:0007023!1.21e-10!115;UBERON:0001871!7.69e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.82e-15;20!UBERON:0002619;7.04e-14;22!UBERON:0002021;3.79e-13;5!UBERON:0000956;3.48e-12;25!UBERON:0000203;3.48e-12;25!UBERON:0001869;1.07e-11;32!UBERON:0000200;7.51e-11;6!UBERON:0001870;4.30e-10;3!UBERON:0001893;9.60e-10;34!UBERON:0002791;2.19e-09;32!UBERON:0002780;1.89e-08;41!UBERON:0001890;1.89e-08;41!UBERON:0003112;3.44e-08;1!UBERON:0011158;3.44e-08;1!UBERON:0007190;3.44e-08;1!UBERON:0003128;3.44e-08;1!UBERON:0001703;3.44e-08;1!UBERON:0002241;3.44e-08;1!UBERON:0003528;2.98e-07;34!UBERON:0002020;2.98e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,3.13e-15,20;UBERON:0002619,7.74e-14,22;UBERON:0002021,4.58e-13,5;UBERON:0001869,3.43e-12,32;UBERON:0000956,3.78e-12,25;UBERON:0000203,3.78e-12,25;UBERON:0002780,8.74e-12,41;UBERON:0001890,8.74e-12,41;UBERON:0003080,8.74e-12,41;UBERON:0006240,8.74e-12,41;UBERON:0001893,1.97e-11,34;UBERON:0000073,4.77e-11,53;UBERON:0002616,4.77e-11,53;UBERON:0000200,9.39e-11,6;UBERON:0001049,2.22e-10,56;UBERON:0005068,2.22e-10,56;UBERON:0006241,2.22e-10,56;UBERON:0007135,2.22e-10,56;UBERON:0001870,4.95e-10,3;UBERON:0000955,6.58e-10,68;UBERON:0006238,6.58e-10,68;UBERON:0001017,1.09e-09,81;UBERON:0002791,2.13e-09,32;UBERON:0003528,8.16e-09,34;UBERON:0002020,8.16e-09,34;UBERON:0001016,1.56e-08,89;UBERON:0007190,3.83e-08,1;UBERON:0003112,5.07e-08,1;UBERON:0011158,5.07e-08,1;UBERON:0003128,5.07e-08,1;UBERON:0001703,5.07e-08,1;UBERON:0002241,5.07e-08,1;UBERON:0004761,5.07e-08,1;UBERON:0009617,5.07e-08,1;UBERON:0003056,1.54e-07,61;UBERON:0010371,3.20e-07,104 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.410623275218653,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.189069634328136,0,0,1.89919659471683,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,2.19409231913646,1.36411807225678,0.252433774244115,0,0,1.06502877754984,0.906768884048762,0.169560592310488,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0.431255149719035,0,0.76228387266739,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.348631135379878,0,0,0,0,0.364182336013434,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.709522128141196,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0.561421621224659,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,3.1668811219199,0,0,0.251932747854276,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,1.20598527610407,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0.689486746482929,0,0.520874984799877,0.885741385813839,0.482385754501632,0,2.87506075821184,0.886642856860642,1.31631238292384,0.32681539055697,0.139423744278603,0,0,0,0,0,0,0,0,1.02193298195737,0,0.664846727600626,0.451191321234361,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0.421996129056054,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.292357268344742,0.0821154570532092,0,2.11814704059601,3.84167259326905,0.137041924646751,0,1.7727022867646,0,0,0.213452994739353,0.19980960958213,0,0,0.171594997861965,0.288109595976299,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0.795229689809303,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.425246896606173,0,0.394028536495991,0,0.105600336519406,0,0,0,0,0.25426853765475,0.542999601753713,0,1.30634944043764,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,1.58634144372552,1.001527445652,0,0.332787154610557,0,0.830091809617385,0.124980407962107,0,0,0,1.87333962322753,1.01444720027578,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0.643324774124777,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0.184105950251841,0,0.622077260032973,0,0.646948868380091,0.157265941855896,0.109209638192014,0.169732529954025,0,0,0,0,0.23658523500376,0,0.352675943690684,0,0.706521476061055,2.8339315265117,0.798169295285756,1.43581454968528,1.00828678488687,0.414943514785307,1.13032951942296,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,1.2832141077495,0,0.826747186004736,0.887821342714695,0,0,0.496211178389294,0.175871244359621,0.127762427639595,0,0.336283722218824,0,1.13831095675649,0,0,0.171488009437418,0.0679697329768317,0.657727735628491,0.118193840883968,0.444925607568277,0.549451649953598,0.785577949580009,0,0,0.431855182437243,0,0.571812353413251,0.47404083519818,0,0,0,0.207216164163037,0.6828739083758,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0.971421986118279,0,0,0.356760272332706,0,0.329821550236287,0.150962843566674,0.231522474323834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| |||
|short_description=p8@SSX2IP | |||
}} |
Latest revision as of 12:23, 19 September 2015
Short description: | p8@SSX2IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SSX2IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_uc001dkg.2, uc001dkh.2, uc009wci.2, uc010orz.1_5end |
EntrezGene: | SSX2IP |
HGNC: | 16509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.11e-14 | 2 |
multinucleate cell | 2.69e-08 | 1 |
myotube | 2.69e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 3.13e-15 | 20 |
regional part of cerebral cortex | 7.74e-14 | 22 |
occipital lobe | 4.58e-13 | 5 |
cerebral hemisphere | 3.43e-12 | 32 |
cerebral cortex | 3.78e-12 | 25 |
pallium | 3.78e-12 | 25 |
regional part of forebrain | 8.74e-12 | 41 |
forebrain | 8.74e-12 | 41 |
anterior neural tube | 8.74e-12 | 41 |
future forebrain | 8.74e-12 | 41 |
telencephalon | 1.97e-11 | 34 |
regional part of nervous system | 4.77e-11 | 53 |
regional part of brain | 4.77e-11 | 53 |
gyrus | 9.39e-11 | 6 |
neural tube | 2.22e-10 | 56 |
neural rod | 2.22e-10 | 56 |
future spinal cord | 2.22e-10 | 56 |
neural keel | 2.22e-10 | 56 |
frontal cortex | 4.95e-10 | 3 |
brain | 6.58e-10 | 68 |
future brain | 6.58e-10 | 68 |
central nervous system | 1.09e-09 | 81 |
regional part of telencephalon | 2.13e-09 | 32 |
brain grey matter | 8.16e-09 | 34 |
gray matter | 8.16e-09 | 34 |
nervous system | 1.56e-08 | 89 |
paracentral gyrus | 3.83e-08 | 1 |
olfactory region | 5.07e-08 | 1 |
primary subdivision of skull | 5.07e-08 | 1 |
cranium | 5.07e-08 | 1 |
neurocranium | 5.07e-08 | 1 |
chondrocranium | 5.07e-08 | 1 |
cartilaginous neurocranium | 5.07e-08 | 1 |
head paraxial mesoderm | 5.07e-08 | 1 |
pre-chordal neural plate | 1.54e-07 | 61 |
ecto-epithelium | 3.20e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.52e-08 | 1 |
extraosseous chondrosarcoma | 1.52e-08 | 1 |
myxoid chondrosarcoma | 1.52e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 1.52e-08 | 1 |