FFCP PHASE1:Hg19::chr22:37628003..37628037,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9802 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-460bp_to_ENST00000481215_5end | |||
|cluster_id=chr22:37628003..37628037,- | |||
|coexpression_cluster_id=C2645 | |||
|description=CAGE_peak_9_at_RAC2_5end | |||
|id=chr22:37628003..37628037,- | |||
|ontology_enrichment_celltype=CL:0000037!1.32e-42!172;CL:0000566!1.32e-42!172;CL:0000988!9.85e-42!182;CL:0002032!5.12e-41!165;CL:0000837!5.12e-41!165;CL:0000738!2.06e-38!140;CL:0002087!5.95e-35!119;CL:0002031!1.12e-34!124;CL:0000763!6.25e-24!112;CL:0000049!6.25e-24!112;CL:0000766!1.32e-22!76;CL:0000839!5.08e-20!70;CL:0000557!2.31e-19!71;CL:0002057!1.61e-18!42;CL:0002194!5.67e-18!63;CL:0000576!5.67e-18!63;CL:0000040!5.67e-18!63;CL:0000559!5.67e-18!63;CL:0002009!1.07e-16!65;CL:0000860!5.32e-16!45;CL:0000542!1.47e-15!53;CL:0000051!1.47e-15!53;CL:0000838!1.84e-15!52;CL:0000084!8.67e-13!25;CL:0000827!8.67e-13!25;CL:0000723!1.94e-11!436;CL:0000134!3.69e-11!358;CL:0000048!5.72e-11!430;CL:0002320!7.95e-11!365;CL:0000034!1.72e-10!444;CL:0000791!2.31e-10!18;CL:0000789!2.31e-10!18;CL:0002420!2.31e-10!18;CL:0002419!2.31e-10!18;CL:0000790!2.31e-10!18;CL:0002371!6.89e-09!591;CL:0000003!1.29e-07!722;CL:0000625!5.27e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.47e-15;25!CL:0000791;1.47e-14;18!CL:0000789;1.47e-14;18!CL:0002419;1.47e-14;18!CL:0000625;1.00e-09;11!CL:0000542;1.11e-09;53!CL:0000738;4.66e-09;136!CL:0000097;4.86e-09;5!CL:0000473;1.23e-08;39!CL:0000234;1.23e-08;39!CL:0000860;1.81e-08;33!CL:0002057;1.81e-08;33!CL:0000766;4.35e-08;69!CL:0002087;4.97e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.74e-30,161;CL:0000837,3.74e-30,161;CL:0000037,4.85e-30,168;CL:0000738,5.37e-29,136;CL:0002031,1.08e-28,120;CL:0000988,2.72e-27,177;CL:0002087,6.38e-25,115;CL:0000838,1.52e-16,52;CL:0000542,4.73e-16,53;CL:0000051,4.73e-16,53;CL:0000084,5.80e-16,25;CL:0000827,5.80e-16,25;CL:0000791,3.58e-15,18;CL:0000789,3.58e-15,18;CL:0002420,3.58e-15,18;CL:0002419,3.58e-15,18;CL:0000790,3.58e-15,18;CL:0000766,7.79e-15,72;CL:0000763,2.05e-14,108;CL:0000049,2.05e-14,108;CL:0000839,2.85e-13,66;CL:0000557,6.23e-13,67;CL:0000473,8.20e-12,48;CL:0000234,8.20e-12,48;CL:0000860,9.58e-11,42;CL:0002057,9.58e-11,42;CL:0000625,4.58e-10,11;CL:0002194,1.00e-09,59;CL:0000576,1.00e-09,59;CL:0000040,1.00e-09,59;CL:0000559,1.00e-09,59;CL:0002009,3.62e-09,61;CL:0000097,4.84e-09,5;CL:0002028,4.84e-09,5;CL:0000134,7.82e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.47e-14;18!CL:0000051;1.11e-09;53!CL:0002057;5.58e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!1.14e-09!51;DOID:0060083!1.14e-09!51;DOID:1240!3.97e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.32e-25!112;UBERON:0002390!4.99e-24!102;UBERON:0003061!4.99e-24!102;UBERON:0002371!1.69e-16!80;UBERON:0003081!4.65e-16!216;UBERON:0002405!8.62e-14!115;UBERON:0001474!1.38e-13!86;UBERON:0004765!1.22e-10!101;UBERON:0001434!1.22e-10!101;UBERON:0002384!5.77e-10!375;UBERON:0002204!2.78e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.29e-17,98;UBERON:0003061,3.29e-17,98;UBERON:0002193,7.00e-17,108;UBERON:0002405,2.29e-12,93;UBERON:0002371,4.38e-11,76;UBERON:0001474,1.32e-09,82;UBERON:0003081,1.62e-09,203;UBERON:0004765,5.66e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,2.13957536094264,0.985207073399349,1.25937250101887,0.393364276848904,0.383829398097213,0.928896739896456,1.83884244895785,1.8072355126695,1.10926203050036,0.46480320348181,0.426507697462265,0,0.553995408531877,0.601633342410425,1.08505435357926,0,0.971680998056939,0.257575567634187,2.03557534291391,1.88937971844405,1.21292030593908,0.929716147622738,1.23350366406548,0.929119112685311,0.28769239232215,0.512321413058201,0.945928919554341,0.689491361473237,1.29096936716765,5.41705946377367,2.07066573496865,2.18324920046277,2.69668181334102,3.06083892370903,2.88836124368484,3.19668562899521,0.989553900560148,0.997318288108159,0.852449501065388,2.03146467040009,2.8369261234557,3.73693349397345,0.75374599577023,1.0429658368404,0.65156653411535,0.605399502633369,0.736555271975129,0.949387162322653,3.16882929467913,1.4882300997553,0.838634582033504,1.46027220490444,0.901061357049038,1.12507910687956,0.570025487482497,1.59133341759272,1.82664153764634,3.51992488922645,2.18455444504853,3.55803701545422,0,0.800791974072025,0,0,0,2.84606484554724,0,1.52909291250092,0,0,1.05353633910031,0.393419540227666,4.32311839024081,1.43921049299656,3.8452893939856,1.62961133316795,0.473447805734733,3.89653456815823,5.01347055983281,3.53527088969805,2.65840673500345,1.62482318259009,4.86747014957566,4.55207716459574,3.94650971048823,4.69795030235942,4.92665245749589,2.22429844743091,2.1403266247177,4.18142095219907,3.05935225283429,1.53288197440768,1.37450978193052,1.51811815211702,1.27426165729639,1.95325036156926,0.950452044448374,2.55977702432214,1.53583933385302,1.24930726552346,2.36777252044017,2.46338399076314,1.00803371612366,1.87208137048455,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.97364218096405,1.0447784237956,2.92507513141503,0.715471872916026,0.571994910780128,1.48583000531826,0.79504962946682,1.72046919021225,0.347140501607594,1.69592382577203,0.419499436209906,0.825354125820202,2.71693456497854,0.775250277507987,1.06729878806013,0,0.402829317109147,2.28081631715554,0.24406205754817,0.367663080345869,1.62028389576352,0.357198913136319,0,0.225222960966644,0,0,1.28241220751285,0,0,0,0,0.25326102332916,0,0,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.67355336034844,0,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.245668634623536,0,0,0.247266929278557,0,1.43723628363248,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,2.89891279744945,1.36373060295417,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,1.20725313949488,2.24803506515239,0.402115889646523,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0,0.866198686566443,0.925971025153221,1.52203321787679,0,0,0.738651018262192,4.44608103764552,1.93220510975347,0.93733833986777,0.335964256397719,0.141775097242386,0.0895585227028483,0,0.766765358330422,5.41929561685538,6.77972941901841,6.42717158176393,4.4677185559258,5.93339437103986,0,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0.845302752556,0,1.04007436911366,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.899756920638513,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,1.56919201590938,1.18218456121156,1.2937654491571,1.28343036279748,0,0,0,0,0,2.99602809578873,20.9413021442817,6.63064821497657,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,0.413536052245775,2.15714200818617,0.74709290462411,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0.462629081407967,0.710246901252508,0.0821271560138091,1.03850885836724,0.232420756919918,0,2.6065841139427,0.460404944679482,0.114814448164607,0,0,0,0,0,1.46139224653261,0,0,2.55140557914773,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0.574265537996172,1.30012049207304,0,0,0,0.15350367472613,0,0.429680979473094,0.290033387828457,0.255679882248303,0,1.32227932288782,0,0,0.2023155617111,0,0.31481234683064,0,0.924100740528266,5.32306030317022,0,3.7064843820784,0.572499546967965,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,3.03273722359974,4.75530963519025,0.842516912477962,0,0.487426979262569,3.16950440270266,0.136499911407986,0.141405431953713,0,1.10273068709225,0.66343897524122,0,1.15755106853338,0,1.01455188481352,0.30982349809975,0,0,0,0.35667105148125,0.709522128141196,0.211107635297664,0.329294892959902,0,0.349934720244983,1.63577591633371,3.35151137767894,3.26672954583968,0.0941438007767792,1.29151611801369,1.68471475667626,0.443430153536676,0.459446800413919,2.02979043692868,2.29391162142713,2.27858874869665,1.19115887728894,1.64544909234478,2.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| |||
|short_description=p9@RAC2 | |||
}} |
Latest revision as of 04:37, 20 September 2015
Short description: | p9@RAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RAC2_5end |
Coexpression cluster: | C2645_Neutrophils_Mast_CD4_Whole_chronic_Monocytederived_meningioma |
Association with transcript: | -460bp_to_ENST00000481215_5end |
EntrezGene: | RAC2 |
HGNC: | 9802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.29e-17 | 98 |
blood island | 3.29e-17 | 98 |
hemolymphoid system | 7.00e-17 | 108 |
immune system | 2.29e-12 | 93 |
bone marrow | 4.38e-11 | 76 |
bone element | 1.32e-09 | 82 |
lateral plate mesoderm | 1.62e-09 | 203 |
skeletal element | 5.66e-08 | 90 |