FFCP PHASE1:Hg19::chr22:38609570..38609585,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6780 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULX9 | |||
|association_with_transcript=28bp_to_ENST00000407965,uc003avd.2_5end | |||
|cluster_id=chr22:38609570..38609585,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_6_at_MAFF_5end | |||
|id=chr22:38609570..38609585,+ | |||
|ontology_enrichment_celltype=CL:0000990!1.07e-31!8;CL:0000451!1.10e-25!10;CL:0002009!7.89e-25!65;CL:0000453!1.21e-22!5;CL:0000557!2.49e-22!71;CL:0002194!1.25e-20!63;CL:0000576!1.25e-20!63;CL:0000040!1.25e-20!63;CL:0000559!1.25e-20!63;CL:0000763!1.55e-20!112;CL:0000049!1.55e-20!112;CL:0000766!1.79e-20!76;CL:0000738!1.26e-19!140;CL:0000840!2.03e-19!5;CL:0001029!2.03e-19!5;CL:0000839!3.85e-18!70;CL:0002032!1.21e-15!165;CL:0000837!1.21e-15!165;CL:0000037!9.77e-15!172;CL:0000566!9.77e-15!172;CL:0002031!1.29e-14!124;CL:0000988!1.46e-13!182;CL:0002087!1.64e-12!119;CL:0000235!2.07e-11!10;CL:0002057!2.83e-10!42;CL:0001014!3.63e-10!2;CL:0001016!3.63e-10!2;CL:0000860!1.91e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000990;3.04e-82;8!CL:0000451;2.82e-67;10!CL:0000840;1.16e-63;5!CL:0000453;2.62e-48;5!CL:0000235;4.11e-41;6!CL:0001014;6.41e-31;2!CL:0001016;6.41e-31;2!CL:0000473;1.14e-08;39!CL:0000234;1.14e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,2.39e-82,8;CL:0000451,2.31e-67,10;CL:0000840,1.32e-63,5;CL:0001029,1.32e-63,5;CL:0000453,2.05e-48,5;CL:0000235,4.56e-41,6;CL:0001014,7.48e-31,2;CL:0001016,7.48e-31,2;CL:0002009,9.56e-24,61;CL:0000557,1.40e-21,67;CL:0000763,3.86e-19,108;CL:0000049,3.86e-19,108;CL:0002194,8.66e-16,59;CL:0000576,8.66e-16,59;CL:0000040,8.66e-16,59;CL:0000559,8.66e-16,59;CL:0000738,5.14e-15,136;CL:0000839,4.47e-14,66;CL:0000766,7.23e-13,72;CL:0002032,1.58e-12,161;CL:0000837,1.58e-12,161;CL:0000037,5.81e-12,168;CL:0002031,9.81e-12,120;CL:0000988,2.67e-11,177;CL:0000473,5.68e-08,48;CL:0000234,5.68e-08,48;CL:0002087,7.64e-08,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.54e-19!86;UBERON:0002371!2.80e-19!80;UBERON:0004765!6.95e-16!101;UBERON:0001434!6.95e-16!101;UBERON:0002390!1.38e-15!102;UBERON:0003061!1.38e-15!102;UBERON:0002193!9.57e-14!112;UBERON:0002405!2.96e-13!115;UBERON:0002204!1.60e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.25e-16;1!UBERON:0006518;2.25e-16;1!UBERON:0008949;2.25e-16;1!UBERON:0000101;2.25e-16;1!UBERON:0002167;2.25e-16;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.85e-19,76;UBERON:0001474,1.58e-17,82;UBERON:0002171,1.93e-16,1;UBERON:0006518,1.93e-16,1;UBERON:0008949,1.93e-16,1;UBERON:0000101,1.93e-16,1;UBERON:0002167,1.93e-16,1;UBERON:0004765,6.57e-16,90;UBERON:0002405,2.26e-15,93;UBERON:0002390,1.50e-14,98;UBERON:0003061,1.50e-14,98;UBERON:0001434,3.03e-14,100;UBERON:0002193,3.94e-13,108;UBERON:0002204,3.60e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,10.7100639906045,10.9701734498538,13.4287540124054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,6.08411089362018,2.52672975890838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0,4.21667878966063,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92290463259083,0.265729680626726,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p6@MAFF | |||
}} |
Latest revision as of 07:40, 20 September 2015
Short description: | p6@MAFF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAFF_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 28bp_to_ENST00000407965, uc003avd.2_5end |
EntrezGene: | MAFF |
HGNC: | 6780 |
UniProt: | Q9ULX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 2.39e-82 | 8 |
dendritic cell | 2.31e-67 | 10 |
immature conventional dendritic cell | 1.32e-63 | 5 |
common dendritic progenitor | 1.32e-63 | 5 |
Langerhans cell | 2.05e-48 | 5 |
macrophage | 4.56e-41 | 6 |
CD1a-positive Langerhans cell | 7.48e-31 | 2 |
immature CD1a-positive Langerhans cell | 7.48e-31 | 2 |
macrophage dendritic cell progenitor | 9.56e-24 | 61 |
granulocyte monocyte progenitor cell | 1.40e-21 | 67 |
myeloid cell | 3.86e-19 | 108 |
common myeloid progenitor | 3.86e-19 | 108 |
monopoietic cell | 8.66e-16 | 59 |
monocyte | 8.66e-16 | 59 |
monoblast | 8.66e-16 | 59 |
promonocyte | 8.66e-16 | 59 |
leukocyte | 5.14e-15 | 136 |
myeloid lineage restricted progenitor cell | 4.47e-14 | 66 |
myeloid leukocyte | 7.23e-13 | 72 |
hematopoietic oligopotent progenitor cell | 1.58e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-12 | 161 |
hematopoietic stem cell | 5.81e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 9.81e-12 | 120 |
hematopoietic cell | 2.67e-11 | 177 |
defensive cell | 5.68e-08 | 48 |
phagocyte | 5.68e-08 | 48 |
nongranular leukocyte | 7.64e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.85e-19 | 76 |
bone element | 1.58e-17 | 82 |
lower lobe of right lung | 1.93e-16 | 1 |
right lung lobe | 1.93e-16 | 1 |
lower lobe of lung | 1.93e-16 | 1 |
lobe of lung | 1.93e-16 | 1 |
right lung | 1.93e-16 | 1 |
skeletal element | 6.57e-16 | 90 |
immune system | 2.26e-15 | 93 |
hematopoietic system | 1.50e-14 | 98 |
blood island | 1.50e-14 | 98 |
skeletal system | 3.03e-14 | 100 |
hemolymphoid system | 3.94e-13 | 108 |
musculoskeletal system | 3.60e-08 | 167 |