FFCP PHASE1:Hg19::chr2:110873631..110873652,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7851 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6818 | |||
|TSSclassifier=strong | |||
|UniProt=C9IZ55 | |||
|association_with_transcript=-32bp_to_ENST00000427178_5end | |||
|cluster_id=chr2:110873631..110873652,- | |||
|description=CAGE_peak_5_at_MALL_5end | |||
|id=chr2:110873631..110873652,- | |||
|ontology_enrichment_celltype=CL:0002139!2.58e-23!24;CL:0000071!1.75e-20!18;CL:0002546!1.75e-20!18;CL:0000115!2.09e-19!35;CL:0002078!3.57e-19!44;CL:0000213!5.39e-13!57;CL:0000215!5.39e-13!57;CL:1000413!8.31e-11!9;CL:0000222!1.19e-09!119;CL:0002543!1.66e-08!6;CL:0002544!1.14e-07!6;CL:0000499!3.90e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.15e-43;24!CL:0000071;1.52e-41;18!CL:0000115;2.39e-31;36!CL:0002543;1.94e-22;6!CL:1000413;1.77e-18;9!CL:0002078;2.76e-18;45!CL:0000213;9.46e-15;58!CL:0000215;9.46e-15;58!CL:0002618;2.49e-12;3!CL:0002544;9.37e-10;6!CL:0000138;3.25e-09;6!CL:1000746;4.00e-08;7!CL:1000612;4.00e-08;7!CL:0000650;7.00e-08;2!CL:1000500;7.00e-08;2!CL:1000618;7.00e-08;2!CL:1001318;7.00e-08;2!CL:0002173;7.00e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.01e-44,24;CL:0000071,7.22e-42,18;CL:0002546,7.22e-42,18;CL:0000115,1.96e-38,36;CL:0002078,1.26e-29,45;CL:0002543,1.81e-22,6;CL:0000213,9.56e-22,58;CL:0000215,9.56e-22,58;CL:1000413,1.26e-18,9;CL:0002618,2.45e-12,3;CL:0000222,1.02e-10,121;CL:0002544,7.06e-10,6;CL:0000076,2.50e-09,63;CL:0000058,3.98e-09,6;CL:0000138,3.98e-09,6;CL:1000746,3.64e-08,7;CL:1000612,3.64e-08,7;CL:0000650,9.42e-08,2;CL:1000500,9.42e-08,2;CL:1000618,9.42e-08,2;CL:1001318,9.42e-08,2;CL:0002173,9.42e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;1.52e-41;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.75e-20!18;UBERON:0004638!1.75e-20!18;UBERON:0004852!1.75e-20!18;UBERON:0000487!2.65e-19!22;UBERON:0006914!3.88e-19!25;UBERON:0002049!4.34e-15!79;UBERON:0007798!4.34e-15!79;UBERON:0000055!1.40e-14!69;UBERON:0001009!9.68e-13!113;UBERON:0003914!1.13e-12!118;UBERON:0001981!5.79e-12!60;UBERON:0007500!5.79e-12!60;UBERON:0004537!5.79e-12!60;UBERON:0006965!5.79e-12!60;UBERON:0004535!1.88e-11!110;UBERON:0003915!8.31e-11!9;UBERON:0004700!8.31e-11!9;UBERON:0001917!8.31e-11!9;UBERON:0004872!1.19e-10!84;UBERON:0004111!3.23e-10!241;UBERON:0000483!6.06e-10!309;UBERON:0000119!1.37e-09!312;UBERON:0000477!2.09e-09!286;UBERON:0000467!3.56e-09!625;UBERON:0000480!4.39e-09!626;UBERON:0001638!2.77e-08!9;UBERON:0003920!2.77e-08!9;UBERON:0004582!2.77e-08!9;UBERON:0000468!3.01e-08!659;UBERON:0000025!6.22e-08!194;UBERON:0000490!1.30e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.52e-41;18!UBERON:0001986;1.52e-41;18!UBERON:0004852;1.52e-41;18!UBERON:0000487;2.75e-38;22!UBERON:0006914;3.42e-33;25!UBERON:0000490;5.47e-22;33!UBERON:0003915;1.77e-18;9!UBERON:0004700;1.77e-18;9!UBERON:0001917;1.77e-18;9!UBERON:0001638;1.05e-14;9!UBERON:0003920;1.05e-14;9!UBERON:0004582;1.05e-14;9!UBERON:0007500;4.03e-13;56!UBERON:0001981;4.03e-13;56!UBERON:0004537;4.03e-13;56!UBERON:0000055;1.02e-11;65!UBERON:0003914;2.85e-10;74!UBERON:0000025;1.81e-08;93!UBERON:0000074;4.00e-08;7!UBERON:0001229;4.00e-08;7!UBERON:0003567;7.00e-08;2!UBERON:0003838;7.00e-08;2!UBERON:0003586;7.00e-08;2!UBERON:0005169;7.00e-08;2!UBERON:0002321;7.00e-08;2!UBERON:0005215;7.00e-08;2!UBERON:0002303;7.00e-08;2!UBERON:0002319;7.00e-08;2!UBERON:0002049;7.09e-08;75!UBERON:0007798;7.09e-08;75!UBERON:0002066;1.55e-07;5!UBERON:0002108;2.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.22e-42,18;UBERON:0001986,7.22e-42,18;UBERON:0004852,7.22e-42,18;UBERON:0000487,1.46e-38,22;UBERON:0006914,1.97e-33,25;UBERON:0000055,1.29e-19,68;UBERON:0003915,1.26e-18,9;UBERON:0004700,1.26e-18,9;UBERON:0001917,1.26e-18,9;UBERON:0007500,3.81e-17,59;UBERON:0001981,3.81e-17,59;UBERON:0004537,3.81e-17,59;UBERON:0006965,3.81e-17,59;UBERON:0002049,2.22e-16,78;UBERON:0007798,2.22e-16,78;UBERON:0001638,1.00e-14,9;UBERON:0003920,1.00e-14,9;UBERON:0004582,1.00e-14,9;UBERON:0003914,6.59e-14,117;UBERON:0004872,7.96e-11,83;UBERON:0004535,3.52e-10,109;UBERON:0001009,9.10e-10,112;UBERON:0010532,3.64e-08,7;UBERON:0000074,3.64e-08,7;UBERON:0001229,3.64e-08,7;UBERON:0001230,3.64e-08,7;UBERON:0003220,3.64e-08,7;UBERON:0005749,3.64e-08,7;UBERON:0004199,3.64e-08,7;UBERON:0004209,3.64e-08,7;UBERON:0004198,3.64e-08,7;UBERON:0000025,3.73e-08,192;UBERON:0003567,9.42e-08,2;UBERON:0003838,9.42e-08,2;UBERON:0003586,9.42e-08,2;UBERON:0005169,9.42e-08,2;UBERON:0002321,9.42e-08,2;UBERON:0005215,9.42e-08,2;UBERON:0002303,9.42e-08,2;UBERON:0002319,9.42e-08,2;UBERON:0004111,1.00e-07,240;UBERON:0002066,1.54e-07,5;UBERON:0002108,3.10e-07,4;UBERON:0005103,3.82e-07,8;UBERON:0000083,3.82e-07,8;UBERON:0009201,3.82e-07,8;UBERON:0006553,3.82e-07,8;UBERON:0003074,3.82e-07,8;UBERON:0003060,3.82e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.618831764800233,0,0,0,0,0,0.369363174230364,1.02000345622126,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,2.60723734129483,2.3858578411533,1.45990461090791,0,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,3.9752481473341,0.860234595106124,3.47140501607594,4.52246353539208,2.09749718104953,2.47606237746061,2.92592953151535,3.10100111003195,1.06729878806013,1.33888245105868,1.61131726843659,1.52054421143703,0.732186172644509,1.83831540172934,0.81014194788176,5.71518261018111,9.87929239555147,12.6124858141321,4.5994991239765,4.74632829784064,3.29763139074733,0,0,0,0,0.886413581652058,0,0,2.4826786753885,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.794025282120147,0,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0.558350568994769,3.71307930930786,3.60516919096435,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.302256294682921,1.3564847384839,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.514703430895577,0.109750285408626,0,0.301586917234893,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.47229790062968,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0.246381468041427,0,0.464841513839837,0.120859449591622,0,0,0.574072240823034,0.728364672026868,0.262248829918848,0.451199612907412,0,2.35304930753057,0,0.422206515571503,0,1.87103075804167,0.863663664408557,4.62681758070868,3.79325012561394,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,1.64007322849853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.706874414074119,0,0,0,0,0.487426979262569,0,0.136499911407986,0,4.52032466480971,1.10273068709225,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.717056761020258,0,0,1.06428319221179,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,9.37649284461163,0,0,0,0,0,0,0.16480387422676,0,0,0,1.76352923497993,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74218449960351,0,0.296521128680622,0,0,0.134802265961354,0,0.234264445725339,0,0,1.45668227720456,0,2.41981432097328,0,0.568679216656392,0,0,0,2.31694369112849,0.627865836814451,1.19472429772959,0.284609546029793,0,0,0,0.174118413160805,0,4.29965081179041,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.0633107959558787,0,0.240476460754601,0.426905989478705,0.19980960958213,0,0,0,0,1.11827282008889,0,8.15425236441684,8.15902201236199,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0.5085370753095,0,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0.258565912723101,0,1.71086837884329,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0.318593534327405,0,0.155262956876259,1.24411862352257,0,0,0,0,0,0,0.322231671127465,0.464033759878494,0,0,0.686791410365586,0.336749488765919,0,0.385239660814607,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.709163045303809,1.22354542081276,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0.473328002922261,0.511280428554946,0.423387050190929,0.68732060563215,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,7.10002254593091,8.74238242015829,0,0,0,0,0,0,1.0195626881269,0,0.0644578879735772,0,0,0.352894871715692,0.0802413666891683,0.730336388246517,0,0,0,0,0,2.1161073620616,0,1.84870251452567,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0.0636471582781649,0.808468755832877,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0.244209805832924,0.213454691755431,0,3.23370727583713,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p5@MALL | |||
}} |
Latest revision as of 07:40, 16 September 2015
Short description: | p5@MALL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MALL_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000427178_5end |
EntrezGene: | MALL |
HGNC: | 6818 |
UniProt: | C9IZ55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.01e-44 | 24 |
blood vessel endothelial cell | 7.22e-42 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.22e-42 | 18 |
endothelial cell | 1.96e-38 | 36 |
meso-epithelial cell | 1.26e-29 | 45 |
vein endothelial cell | 1.81e-22 | 6 |
lining cell | 9.56e-22 | 58 |
barrier cell | 9.56e-22 | 58 |
endothelial cell of artery | 1.26e-18 | 9 |
endothelial cell of umbilical vein | 2.45e-12 | 3 |
mesodermal cell | 1.02e-10 | 121 |
aortic endothelial cell | 7.06e-10 | 6 |
squamous epithelial cell | 2.50e-09 | 63 |
chondroblast | 3.98e-09 | 6 |
chondrocyte | 3.98e-09 | 6 |
glomerular cell | 3.64e-08 | 7 |
kidney corpuscule cell | 3.64e-08 | 7 |
mesangial cell | 9.42e-08 | 2 |
kidney interstitial cell | 9.42e-08 | 2 |
juxtaglomerular complex cell | 9.42e-08 | 2 |
renal interstitial pericyte | 9.42e-08 | 2 |
extraglomerular mesangial cell | 9.42e-08 | 2 |