FFCP PHASE1:Mm9::chr10:128258840..128258856,+: Difference between revisions
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{{FFCP|EntrezGene=66118|HGNC=|MCL_coexpression_id=4|UniProt=Q9D1J3,B2RXM7,B7ZWI2|association_with_transcript=13bp_to_ENSMUST00000105230,NM_025364,uc007hoq.2,uc007hor.2,uc007hos.2,uc011xqk.1_5end|description=CAGE_peak_3_at_Sarnp_5end|id=chr10:128258840..128258856,+|ontology_enrichment_celltype=CL:0000988!1.84e-07!32;CL:0002032!1.84e-07!32;CL:0000037!1.84e-07!32;CL:0000566!1.84e-07!32;CL:0000837!1.84e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,1.42e-11,9;CL:0000789,1.42e-11,9;CL:0002420,1.42e-11,9;CL:0002419,1.42e-11,9;CL:0000790,1.42e-11,9;CL:0000838,4.19e-11,12;CL:0000542,3.83e-10,13;CL:0000051,3.83e-10,13;CL:0000624,9.13e-10,8;CL:0000084,2.79e-09,11;CL:0000827,2.79e-09,11;CL:0000893,2.81e-09,6;CL:0002489,2.81e-09,6;CL:0000898,2.81e-09,6;CL:0000809,2.81e-09,6;CL:0000810,2.81e-09,6;CL:0000895,2.81e-09,6;CL:0000808,2.81e-09,6;CL:0000894,2.81e-09,6;CL:0000806,2.81e-09,6;CL:0000807,2.81e-09,6;CL:0000805,2.81e-09,6;CL:0002425,2.81e-09,6;CL:0002436,2.81e-09,6;CL:0002427,2.81e-09,6;CL:0002428,2.81e-09,6;CL:0002429,2.81e-09,6;CL:0002433,2.81e-09,6;CL:0002431,2.81e-09,6;CL:0002432,2.81e-09,6;CL:0000988,4.17e-09,32;CL:0002032,4.17e-09,32;CL:0000037,4.17e-09,32;CL:0000837,4.17e-09,32;CL:0002031,7.57e-09,25;CL:0000738,1.95e-07,17;CL:0002087,1.95e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.03e-12!29;UBERON:0002193!1.21e-10!48;UBERON:0002390!3.56e-10!45;UBERON:0003061!3.56e-10!45;UBERON:0002370!1.05e-09!23;UBERON:0000974!1.05e-09!23;UBERON:0004807!1.05e-09!23;UBERON:0005058!1.05e-09!23;UBERON:0003351!1.05e-09!23;UBERON:0009113!1.05e-09!23;UBERON:0003295!1.05e-09!23;UBERON:0009722!1.05e-09!23;UBERON:0005562!1.05e-09!23;UBERON:0007690!1.05e-09!23;UBERON:0006562!8.62e-09!24;UBERON:0003408!8.62e-09!24;UBERON:0001557!8.62e-09!24;UBERON:0001042!8.62e-09!24;UBERON:0008814!8.62e-09!24;UBERON:0009145!8.62e-09!24;UBERON:0002405!3.70e-08!70;UBERON:0005057!1.08e-07!51;UBERON:0000072!2.00e-07!27;UBERON:0003929!8.48e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.20e-27,23;UBERON:0000974,2.20e-27,23;UBERON:0004807,2.20e-27,23;UBERON:0005058,2.20e-27,23;UBERON:0003351,2.20e-27,23;UBERON:0009113,2.20e-27,23;UBERON:0003295,2.20e-27,23;UBERON:0009722,2.20e-27,23;UBERON:0005562,2.20e-27,23;UBERON:0007690,2.20e-27,23;UBERON:0006562,4.60e-26,24;UBERON:0003408,4.60e-26,24;UBERON:0001557,4.60e-26,24;UBERON:0001042,4.60e-26,24;UBERON:0008814,4.60e-26,24;UBERON:0009145,4.60e-26,24;UBERON:0004177,4.86e-26,29;UBERON:0005057,4.86e-26,29;UBERON:0002193,3.74e-23,48;UBERON:0002405,3.74e-23,48;UBERON:0002390,7.64e-23,45;UBERON:0003061,7.64e-23,45;UBERON:0000072,1.09e-22,27;UBERON:0000077,9.37e-21,35;UBERON:0007811,6.01e-16,36;UBERON:0000065,1.73e-13,41;UBERON:0001004,4.55e-13,42;UBERON:0003929,9.58e-13,55;UBERON:0000153,1.14e-12,43;UBERON:0000490,5.46e-11,66;UBERON:0000926,3.32e-10,120;UBERON:0004120,3.32e-10,120;UBERON:0006603,3.32e-10,120;UBERON:0003081,3.78e-10,87;UBERON:0005911,3.42e-09,69;UBERON:0002368,6.27e-08,60;UBERON:0002530,5.10e-07,65|phase1_expression=0,1.04692622291808,0.909998478779072,1.51232105653415,1.00179145989269,0.16787927191189,0.233612640595526,3.48632973292256,3.09735188733667,2.57470978954193,0.856089841127525,1.27635454392538,3.76641605848653,2.01066925563694,0.333109761815663,0.809901069559304,0.699561878128147,2.83915948822414,3.01651753932625,1.27316895539409,1.87095238332354,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,1.57057123192139,0,0.683045484958446,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,5.20126078778983,0.725362142011344,2.35265659399725,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0.45839474333043,0,0.284743361598206,0,0.302904773332736,0.529000920747499,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0.239630249011841,1.79970819298022,0.508280908292259,0,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.30140963567143,0.204109497453984,0.384341160854549,0.187403449119458,0.776110112217047,0.646703978798527,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.398068533636986,1.40442637462647,0.772043721344145,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.617068451549513,0,0,0.11676534236716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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66118 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D1J3,B2RXM7,B7ZWI2 | |||
|association_with_transcript=13bp_to_ENSMUST00000105230,NM_025364,uc007hoq.2,uc007hor.2,uc007hos.2,uc011xqk.1_5end | |||
|cluster_id=chr10:128258840..128258856,+ | |||
|description=CAGE_peak_3_at_Sarnp_5end | |||
|id=chr10:128258840..128258856,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.84e-07!32;CL:0002032!1.84e-07!32;CL:0000037!1.84e-07!32;CL:0000566!1.84e-07!32;CL:0000837!1.84e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.42e-11,9;CL:0000789,1.42e-11,9;CL:0002420,1.42e-11,9;CL:0002419,1.42e-11,9;CL:0000790,1.42e-11,9;CL:0000838,4.19e-11,12;CL:0000542,3.83e-10,13;CL:0000051,3.83e-10,13;CL:0000624,9.13e-10,8;CL:0000084,2.79e-09,11;CL:0000827,2.79e-09,11;CL:0000893,2.81e-09,6;CL:0002489,2.81e-09,6;CL:0000898,2.81e-09,6;CL:0000809,2.81e-09,6;CL:0000810,2.81e-09,6;CL:0000895,2.81e-09,6;CL:0000808,2.81e-09,6;CL:0000894,2.81e-09,6;CL:0000806,2.81e-09,6;CL:0000807,2.81e-09,6;CL:0000805,2.81e-09,6;CL:0002425,2.81e-09,6;CL:0002436,2.81e-09,6;CL:0002427,2.81e-09,6;CL:0002428,2.81e-09,6;CL:0002429,2.81e-09,6;CL:0002433,2.81e-09,6;CL:0002431,2.81e-09,6;CL:0002432,2.81e-09,6;CL:0000988,4.17e-09,32;CL:0002032,4.17e-09,32;CL:0000037,4.17e-09,32;CL:0000837,4.17e-09,32;CL:0002031,7.57e-09,25;CL:0000738,1.95e-07,17;CL:0002087,1.95e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.03e-12!29;UBERON:0002193!1.21e-10!48;UBERON:0002390!3.56e-10!45;UBERON:0003061!3.56e-10!45;UBERON:0002370!1.05e-09!23;UBERON:0000974!1.05e-09!23;UBERON:0004807!1.05e-09!23;UBERON:0005058!1.05e-09!23;UBERON:0003351!1.05e-09!23;UBERON:0009113!1.05e-09!23;UBERON:0003295!1.05e-09!23;UBERON:0009722!1.05e-09!23;UBERON:0005562!1.05e-09!23;UBERON:0007690!1.05e-09!23;UBERON:0006562!8.62e-09!24;UBERON:0003408!8.62e-09!24;UBERON:0001557!8.62e-09!24;UBERON:0001042!8.62e-09!24;UBERON:0008814!8.62e-09!24;UBERON:0009145!8.62e-09!24;UBERON:0002405!3.70e-08!70;UBERON:0005057!1.08e-07!51;UBERON:0000072!2.00e-07!27;UBERON:0003929!8.48e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.20e-27,23;UBERON:0000974,2.20e-27,23;UBERON:0004807,2.20e-27,23;UBERON:0005058,2.20e-27,23;UBERON:0003351,2.20e-27,23;UBERON:0009113,2.20e-27,23;UBERON:0003295,2.20e-27,23;UBERON:0009722,2.20e-27,23;UBERON:0005562,2.20e-27,23;UBERON:0007690,2.20e-27,23;UBERON:0006562,4.60e-26,24;UBERON:0003408,4.60e-26,24;UBERON:0001557,4.60e-26,24;UBERON:0001042,4.60e-26,24;UBERON:0008814,4.60e-26,24;UBERON:0009145,4.60e-26,24;UBERON:0004177,4.86e-26,29;UBERON:0005057,4.86e-26,29;UBERON:0002193,3.74e-23,48;UBERON:0002405,3.74e-23,48;UBERON:0002390,7.64e-23,45;UBERON:0003061,7.64e-23,45;UBERON:0000072,1.09e-22,27;UBERON:0000077,9.37e-21,35;UBERON:0007811,6.01e-16,36;UBERON:0000065,1.73e-13,41;UBERON:0001004,4.55e-13,42;UBERON:0003929,9.58e-13,55;UBERON:0000153,1.14e-12,43;UBERON:0000490,5.46e-11,66;UBERON:0000926,3.32e-10,120;UBERON:0004120,3.32e-10,120;UBERON:0006603,3.32e-10,120;UBERON:0003081,3.78e-10,87;UBERON:0005911,3.42e-09,69;UBERON:0002368,6.27e-08,60;UBERON:0002530,5.10e-07,65 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,1.51232105653415,1.00179145989269,0.16787927191189,0.233612640595526,3.48632973292256,3.09735188733667,2.57470978954193,0.856089841127525,1.27635454392538,3.76641605848653,2.01066925563694,0.333109761815663,0.809901069559304,0.699561878128147,2.83915948822414,3.01651753932625,1.27316895539409,1.87095238332354,0.198581902401771,0.261199789138935,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0.837063261473815,0,1.57057123192139,0,0.683045484958446,0.485510353031154,0,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,5.20126078778983,0.725362142011344,2.35265659399725,0,0,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0.131886287730194,0,0,0,0,0.45839474333043,0,0.284743361598206,0,0.302904773332736,0.529000920747499,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.34255163915718,2.33044095282455,0.29688427812965,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0.247194967734374,0,1.76922110389975,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0,0.239630249011841,1.79970819298022,0.508280908292259,0,0,0.125654352112864,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.30140963567143,0.204109497453984,0.384341160854549,0.187403449119458,0.776110112217047,0.646703978798527,0.567318240503458,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0.398068533636986,1.40442637462647,0.772043721344145,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.617068451549513,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0,0.102904612379284,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0.570676878337677,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.685491075658373,0,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0.296452627087149,0.500535317148282,0.982794975566015,0.449724224769707,0.608580364165509,0.241177159752417,0.50925170356284,0,0.648540907100142,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0,0,0.141940085208269,0.35613120733451,0.325773918707152,0,0,0.485561272309963,0,0,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0.21183207086382,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0.492422699235184,0.582961673259701,0,2.05045056957423,0.619160603889667,0.740778109478847,0.941842285023455,1.0935538217682,0.228778173206523,0.509935289981566,0.419854356970974,0.552799895217695,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0,0.26175594198403,0.648074866458964,0,5.6369293868419,0.598066184175915,0.66183396182839,0.777804753376191,0.645799117388655,0.506868376472335,0.469428954583016,0.5208175393758,3.67007705489988,5.79801889982414,4.32045009386798,10.7443781013581,0.405450430580328,0.513554785824136,1.94881234466693,2.8644271306797,5.36439657909415,4.92801343031872,6.79371825003055,6.15895344683701,5.71551049912499,7.56196388526304,9.16104078953673,5.96513418170043,6.778860326531,0,0.887943813496259,0.897138566094757,1.00730769818447,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.830298780673413,0,0,0.729320151204882,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0,1.02860775715625,0.177475806159338,0.238436189947321,0,0,0.169229215783353,0,0.526139422875686,0,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Sarnp | |||
}} |
Latest revision as of 19:26, 25 September 2015
Short description: | p3@Sarnp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sarnp_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 13bp_to_ENSMUST00000105230, NM_025364, uc007hoq.2, uc007hor.2, uc007hos.2, uc011xqk.1_5end |
EntrezGene: | Sarnp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data