FFCP PHASE1:Mm9::chr10:79379657..79379690,-: Difference between revisions
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{{FFCP|EntrezGene=109284|HGNC=|MCL_coexpression_id=1914|UniProt=Q4VBF2,B2RRK4|association_with_transcript=0bp_to_ENSMUST00000045628,NM_177994,uc007gan.1_5end|description=CAGE_peak_1_at_C030046I01Rik_5end|id=chr10:79379657..79379690,-|ontology_enrichment_celltype=CL:0000117!5.99e-10!23;CL:0000337!5.99e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.99e-10,23;CL:0000337,5.99e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.06e-15!63;UBERON:0001049!6.77e-15!52;UBERON:0005068!6.77e-15!52;UBERON:0006241!6.77e-15!52;UBERON:0007135!6.77e-15!52;UBERON:0002020!2.89e-14!34;UBERON:0000955!5.17e-14!50;UBERON:0006238!5.17e-14!50;UBERON:0002616!1.74e-13!49;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0004121!3.20e-12!102;UBERON:0000924!3.20e-12!102;UBERON:0006601!3.20e-12!102;UBERON:0007811!3.33e-12!86;UBERON:0003080!4.29e-12!40;UBERON:0003056!4.68e-12!49;UBERON:0000153!7.86e-12!94;UBERON:0002780!8.93e-12!39;UBERON:0001890!8.93e-12!39;UBERON:0006240!8.93e-12!39;UBERON:0002791!9.29e-12!29;UBERON:0003528!9.29e-12!29;UBERON:0001893!9.29e-12!29;UBERON:0000073!2.62e-11!75;UBERON:0001016!2.62e-11!75;UBERON:0002346!3.14e-11!71;UBERON:0003075!3.14e-11!71;UBERON:0007284!3.14e-11!71;UBERON:0000956!1.96e-09!21;UBERON:0001869!1.96e-09!21;UBERON:0000203!1.96e-09!21;UBERON:0000475!2.24e-08!200;UBERON:0002021!9.89e-08!10;UBERON:0000411!9.89e-08!10;UBERON:0001950!9.89e-08!10;UBERON:0002619!2.08e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.51e-16,54;UBERON:0001049,6.77e-15,52;UBERON:0005068,6.77e-15,52;UBERON:0006241,6.77e-15,52;UBERON:0007135,6.77e-15,52;UBERON:0010371,1.69e-14,73;UBERON:0002020,2.89e-14,34;UBERON:0004121,8.22e-14,95;UBERON:0000924,8.22e-14,95;UBERON:0006601,8.22e-14,95;UBERON:0002346,2.89e-13,64;UBERON:0003075,2.89e-13,64;UBERON:0007284,2.89e-13,64;UBERON:0000955,6.01e-13,47;UBERON:0006238,6.01e-13,47;UBERON:0001017,1.48e-12,73;UBERON:0002616,1.98e-12,46;UBERON:0003080,4.29e-12,40;UBERON:0003056,4.68e-12,49;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0003528,9.29e-12,29;UBERON:0002791,9.29e-12,29;UBERON:0001893,9.29e-12,29;UBERON:0001016,2.62e-11,75;UBERON:0000956,1.96e-09,21;UBERON:0001869,1.96e-09,21;UBERON:0000203,1.96e-09,21;UBERON:0010314,5.59e-09,92;UBERON:0002021,9.89e-08,10;UBERON:0000411,9.89e-08,10;UBERON:0001950,9.89e-08,10;UBERON:0002619,2.08e-07,17|phase1_expression=77.5120419987203,19.1936474201649,22.7499619694768,16.9379958331825,19.0340377379612,45.4952826881221,51.1611682904201,72.0508144803996,12.8117737158017,11.4691617897777,20.8885921235116,22.7350653136709,59.920255475922,67.226289460209,43.6373787978518,34.8257459910501,35.6776557845355,54.417223524296,44.6993053554708,41.590185876207,78.6650433897395,56.1986783797011,42.0531660513686,47.3577571468484,54.1405903318521,16.6527269593356,33.5994357004078,36.4146383239152,45.7956440889861,35.7882784259102,67.8495362605232,75.5686501416961,48.590118219181,63.3926724061755,39.5726719059246,40.2287841767551,37.1588228397512,471.685147840495,286.750071440235,232.96806606834,408.232652693524,407.095109035234,343.741329946057,89.0090503087331,84.3456067746361,67.5452047954988,150.219138114824,32.9217986134474,42.1797470850186,23.1371579898397,33.4567547684616,46.0008205967909,34.7309994539514,52.9514363668281,56.7998520550764,50.6801088990816,44.1261497505685,42.8007836590277,118.152813142005,142.298573424177,117.892641052149,52.5209024707155,56.0255721550018,98.5390190423132,128.552627133707,127.175940575352,93.1756343712239,108.733780406,120.902087951685,131.090766120072,122.619452467856,131.685103810153,120.815091900533,115.876296057347,100.062671743039,109.387035606592,116.722833859352,93.850193492613,74.9599882290468,120.675953273127,118.110547890711,109.912721187476,66.4455537623287,55.7134983931363,81.5942643128166,128.752691851993,103.077096898551,133.648402656741,36.6514775732611,40.5819277773438,21.1601076752225,36.9982267101996,38.7583660213418,50.7321000139548,42.8852435515462,47.4908500323176,78.087097593254,101.406041933944,94.0425336662385,92.9283080962195,73.8019519629806,61.5967091588726,73.8935195149272,127.9920065676,50.4424125556129,45.8581356509928,48.0248222764044,56.7493882203728,49.716073660257,59.0799713478003,46.6675529000905,46.5832181817576,50.0435629045647,40.5443903086555,58.4415874464453,67.7342927266951,85.282263868359,72.7334765307156,88.4610551949874,72.9568493262815,74.644433239613,65.9430344263902,104.379386282148,82.8569655542678,102.838333045406,42.6613282198348,46.2486380592852,31.1949420116572,47.0159840170339,83.7329674272959,161.955213397794,179.308760465058,180.95111732016,244.975408122457,79.375033021752,152.993511072895,67.8250163243107,75.3906241897164,51.302719962036,90.2795561752973,50.8770931984171,55.1765050640335,51.8578933839406,60.8847464056289,73.1392365876774,67.6440443104007,76.1795020670595,87.4417393097873,52.1674542897478,62.0267942950447,75.4830322663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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109284 | |||
|HGNC= | |||
|MCL_coexpression_id=1914 | |||
|TSSclassifier=NA | |||
|UniProt=Q4VBF2,B2RRK4 | |||
|association_with_transcript=0bp_to_ENSMUST00000045628,NM_177994,uc007gan.1_5end | |||
|cluster_id=chr10:79379657..79379690,- | |||
|description=CAGE_peak_1_at_C030046I01Rik_5end | |||
|id=chr10:79379657..79379690,- | |||
|ontology_enrichment_celltype=CL:0000117!5.99e-10!23;CL:0000337!5.99e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.99e-10,23;CL:0000337,5.99e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.06e-15!63;UBERON:0001049!6.77e-15!52;UBERON:0005068!6.77e-15!52;UBERON:0006241!6.77e-15!52;UBERON:0007135!6.77e-15!52;UBERON:0002020!2.89e-14!34;UBERON:0000955!5.17e-14!50;UBERON:0006238!5.17e-14!50;UBERON:0002616!1.74e-13!49;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0004121!3.20e-12!102;UBERON:0000924!3.20e-12!102;UBERON:0006601!3.20e-12!102;UBERON:0007811!3.33e-12!86;UBERON:0003080!4.29e-12!40;UBERON:0003056!4.68e-12!49;UBERON:0000153!7.86e-12!94;UBERON:0002780!8.93e-12!39;UBERON:0001890!8.93e-12!39;UBERON:0006240!8.93e-12!39;UBERON:0002791!9.29e-12!29;UBERON:0003528!9.29e-12!29;UBERON:0001893!9.29e-12!29;UBERON:0000073!2.62e-11!75;UBERON:0001016!2.62e-11!75;UBERON:0002346!3.14e-11!71;UBERON:0003075!3.14e-11!71;UBERON:0007284!3.14e-11!71;UBERON:0000956!1.96e-09!21;UBERON:0001869!1.96e-09!21;UBERON:0000203!1.96e-09!21;UBERON:0000475!2.24e-08!200;UBERON:0002021!9.89e-08!10;UBERON:0000411!9.89e-08!10;UBERON:0001950!9.89e-08!10;UBERON:0002619!2.08e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.51e-16,54;UBERON:0001049,6.77e-15,52;UBERON:0005068,6.77e-15,52;UBERON:0006241,6.77e-15,52;UBERON:0007135,6.77e-15,52;UBERON:0010371,1.69e-14,73;UBERON:0002020,2.89e-14,34;UBERON:0004121,8.22e-14,95;UBERON:0000924,8.22e-14,95;UBERON:0006601,8.22e-14,95;UBERON:0002346,2.89e-13,64;UBERON:0003075,2.89e-13,64;UBERON:0007284,2.89e-13,64;UBERON:0000955,6.01e-13,47;UBERON:0006238,6.01e-13,47;UBERON:0001017,1.48e-12,73;UBERON:0002616,1.98e-12,46;UBERON:0003080,4.29e-12,40;UBERON:0003056,4.68e-12,49;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0003528,9.29e-12,29;UBERON:0002791,9.29e-12,29;UBERON:0001893,9.29e-12,29;UBERON:0001016,2.62e-11,75;UBERON:0000956,1.96e-09,21;UBERON:0001869,1.96e-09,21;UBERON:0000203,1.96e-09,21;UBERON:0010314,5.59e-09,92;UBERON:0002021,9.89e-08,10;UBERON:0000411,9.89e-08,10;UBERON:0001950,9.89e-08,10;UBERON:0002619,2.08e-07,17 | |||
|phase1_expression=77.5120419987203,19.1936474201649,22.7499619694768,16.9379958331825,19.0340377379612,45.4952826881221,51.1611682904201,72.0508144803996,12.8117737158017,11.4691617897777,20.8885921235116,22.7350653136709,59.920255475922,67.226289460209,43.6373787978518,34.8257459910501,35.6776557845355,54.417223524296,44.6993053554708,41.590185876207,78.6650433897395,56.1986783797011,42.0531660513686,47.3577571468484,54.1405903318521,16.6527269593356,33.5994357004078,36.4146383239152,45.7956440889861,35.7882784259102,67.8495362605232,75.5686501416961,48.590118219181,63.3926724061755,39.5726719059246,40.2287841767551,37.1588228397512,471.685147840495,286.750071440235,232.96806606834,408.232652693524,407.095109035234,343.741329946057,89.0090503087331,84.3456067746361,67.5452047954988,150.219138114824,32.9217986134474,42.1797470850186,23.1371579898397,33.4567547684616,46.0008205967909,34.7309994539514,52.9514363668281,56.7998520550764,50.6801088990816,44.1261497505685,42.8007836590277,118.152813142005,142.298573424177,117.892641052149,52.5209024707155,56.0255721550018,98.5390190423132,128.552627133707,127.175940575352,93.1756343712239,108.733780406,120.902087951685,131.090766120072,122.619452467856,131.685103810153,120.815091900533,115.876296057347,100.062671743039,109.387035606592,116.722833859352,93.850193492613,74.9599882290468,120.675953273127,118.110547890711,109.912721187476,66.4455537623287,55.7134983931363,81.5942643128166,128.752691851993,103.077096898551,133.648402656741,36.6514775732611,40.5819277773438,21.1601076752225,36.9982267101996,38.7583660213418,50.7321000139548,42.8852435515462,47.4908500323176,78.087097593254,101.406041933944,94.0425336662385,92.9283080962195,73.8019519629806,61.5967091588726,73.8935195149272,127.9920065676,50.4424125556129,45.8581356509928,48.0248222764044,56.7493882203728,49.716073660257,59.0799713478003,46.6675529000905,46.5832181817576,50.0435629045647,40.5443903086555,58.4415874464453,67.7342927266951,85.282263868359,72.7334765307156,88.4610551949874,72.9568493262815,74.644433239613,65.9430344263902,104.379386282148,82.8569655542678,102.838333045406,42.6613282198348,46.2486380592852,31.1949420116572,47.0159840170339,83.7329674272959,161.955213397794,179.308760465058,180.95111732016,244.975408122457,79.375033021752,152.993511072895,67.8250163243107,75.3906241897164,51.302719962036,90.2795561752973,50.8770931984171,55.1765050640335,51.8578933839406,60.8847464056289,73.1392365876774,67.6440443104007,76.1795020670595,87.4417393097873,52.1674542897478,62.0267942950447,75.4830322663341,65.5395239958449,69.2337650571739,57.8098596426796,51.03396982917,51.9479436396267,26.6841011179029,19.8157888478331,48.3077948972507,34.7971297859643,45.2635295763516,39.0734673370402,48.7694155305533,49.3878221685984,45.2002640760018,45.5766531710799,51.7767664701265,61.4185700851312,66.4821793650461,65.6669856316381,83.8251490704148,81.5795929833354,77.7207408130319,85.0868694940757,203.350380261511,137.068943689207,39.9806727410396,27.7673094996721,49.269585873639,53.4144345279009,48.7119003797513,43.3619577940186,39.1385357166972,42.9909915014384,46.9783770929066,39.0336522695906,58.5611036504628,59.2890286682629,61.608651529642,46.7386092500195,51.4408558701772,66.5131852669586,57.4693739887837,45.8136535565013,51.845558409617,51.9310886005551,49.2639317405769,62.7715588018351,71.0146311905409,69.6719898463722,70.9634249843014,78.7273905821087,37.9459362671551,43.8802628033327,40.2945939982066,50.8188373989769,39.5577236707581,43.6530659151874,37.4300002118687,42.8667244801708,41.6687532811841,37.065790780391,73.3217853289508,42.4240680342094,40.2528598317783,47.7374079320041,39.8262258018645,49.2092391790635,69.4671995026434,45.4779388249163,50.193212744144,47.6983691028279,55.8562790926635,59.6322276492864,64.2717830392237,72.1994497073856,70.147639127255,63.1174365499009,73.8275578884165,60.1378365006758,65.6202931090403,76.2300538724566,36.1899081454253,38.0733978673097,57.5364199432272,72.0194907855352,63.0963818652022,69.8581652089531,62.13134429776,154.764678376281,35.652428794037,37.8725581967739,61.3956683538477,42.2974772376017,55.9224671946809,46.4245510493685,43.7195557808886,46.4686814078986,42.295792240278,136.240238162846,63.1633379176795,66.2404045642189,75.5795491400593,69.2874516484649,58.4078608695836,47.8277853225313,50.4880340131134,46.9626648592186,59.6509823619161,43.3483558600938,47.2923776497845,58.8924641753559,56.326585784786,66.6837559244572,74.8472120882491,80.4457237335857,58.8960517954053,54.0183282093931,72.0527868669943,62.8007512642565,59.2316380365194,62.7858237959288,63.0222748906123,80.9876764644834,30.0379786321549,47.6622159443595,51.3831167468061,70.406430006012,69.5911679059353,64.7760813728394,77.9501406340481,67.7901915947103,46.3454530241463,66.0114075157414,49.2108136697816,62.3288341248932,53.336023882477,55.9454317303932,57.5482698705516,54.9067615695654,64.7617818276589,65.9171340444429,72.1403863259092,125.06185095998,56.3078068574421,5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| |||
|short_description=p1@C030046I01Rik | |||
}} |
Latest revision as of 09:11, 26 September 2015
Short description: | p1@C030046I01Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C030046I01Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1914 |
Association with transcript: | 0bp_to_ENSMUST00000045628, NM_177994, uc007gan.1_5end |
EntrezGene: | C030046I01Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.99e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.99e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.51e-16 | 54 |
neural tube | 6.77e-15 | 52 |
neural rod | 6.77e-15 | 52 |
future spinal cord | 6.77e-15 | 52 |
neural keel | 6.77e-15 | 52 |
ecto-epithelium | 1.69e-14 | 73 |
gray matter | 2.89e-14 | 34 |
ectoderm-derived structure | 8.22e-14 | 95 |
ectoderm | 8.22e-14 | 95 |
presumptive ectoderm | 8.22e-14 | 95 |
neurectoderm | 2.89e-13 | 64 |
neural plate | 2.89e-13 | 64 |
presumptive neural plate | 2.89e-13 | 64 |
brain | 6.01e-13 | 47 |
future brain | 6.01e-13 | 47 |
central nervous system | 1.48e-12 | 73 |
regional part of brain | 1.98e-12 | 46 |
anterior neural tube | 4.29e-12 | 40 |
pre-chordal neural plate | 4.68e-12 | 49 |
regional part of forebrain | 8.93e-12 | 39 |
forebrain | 8.93e-12 | 39 |
future forebrain | 8.93e-12 | 39 |
brain grey matter | 9.29e-12 | 29 |
regional part of telencephalon | 9.29e-12 | 29 |
telencephalon | 9.29e-12 | 29 |
nervous system | 2.62e-11 | 75 |
cerebral cortex | 1.96e-09 | 21 |
cerebral hemisphere | 1.96e-09 | 21 |
pallium | 1.96e-09 | 21 |
structure with developmental contribution from neural crest | 5.59e-09 | 92 |
occipital lobe | 9.89e-08 | 10 |
visual cortex | 9.89e-08 | 10 |
neocortex | 9.89e-08 | 10 |
regional part of cerebral cortex | 2.08e-07 | 17 |