FFCP PHASE1:Hg19::chr2:39893433..39893444,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28517 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=320bp_to_DQ890996_5end | |||
|cluster_id=chr2:39893433..39893444,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_28_at_TMEM178_5end | |||
|id=chr2:39893433..39893444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.34e-30!57;UBERON:0005068!1.34e-30!57;UBERON:0006241!1.34e-30!57;UBERON:0007135!1.34e-30!57;UBERON:0000955!2.18e-30!69;UBERON:0006238!2.18e-30!69;UBERON:0002616!1.87e-29!59;UBERON:0001893!6.28e-27!34;UBERON:0001017!4.85e-25!82;UBERON:0005743!1.03e-23!86;UBERON:0002791!1.48e-23!33;UBERON:0001950!2.55e-22!20;UBERON:0002780!5.19e-22!41;UBERON:0001890!5.19e-22!41;UBERON:0006240!5.19e-22!41;UBERON:0003075!1.66e-21!86;UBERON:0007284!1.66e-21!86;UBERON:0003080!1.94e-21!42;UBERON:0000073!3.98e-21!94;UBERON:0001016!3.98e-21!94;UBERON:0001869!1.76e-20!32;UBERON:0002346!2.19e-20!90;UBERON:0002619!2.99e-20!22;UBERON:0002020!3.34e-19!34;UBERON:0003528!3.34e-19!34;UBERON:0000033!3.54e-19!123;UBERON:0000153!4.32e-18!129;UBERON:0007811!4.32e-18!129;UBERON:0000956!9.57e-18!25;UBERON:0000203!9.57e-18!25;UBERON:0003056!1.94e-16!61;UBERON:0007023!2.75e-15!115;UBERON:0004733!6.01e-13!12;UBERON:0002028!6.01e-13!12;UBERON:0007277!6.01e-13!12;UBERON:0001871!8.16e-13!7;UBERON:0004121!1.06e-12!169;UBERON:0002298!1.59e-12!8;UBERON:0000924!2.62e-12!173;UBERON:0006601!2.62e-12!173;UBERON:0004732!6.20e-12!13;UBERON:0003076!2.60e-10!15;UBERON:0003057!2.60e-10!15;UBERON:0000200!5.05e-10!6;UBERON:0000025!1.50e-09!194;UBERON:0002771!1.98e-09!3;UBERON:0001896!5.74e-09!3;UBERON:0005290!5.74e-09!3;UBERON:0010096!5.74e-09!3;UBERON:0000064!5.60e-08!219;UBERON:0002022!1.33e-07!1;UBERON:0002038!1.42e-07!1;UBERON:0009661!1.42e-07!1;UBERON:0007190!1.51e-07!1;UBERON:0001882!2.50e-07!1;UBERON:0005403!2.50e-07!1;UBERON:0002902!4.09e-07!1;UBERON:0009899!4.09e-07!1;UBERON:0002336!4.34e-07!1;UBERON:0001018!4.34e-07!1;UBERON:0002473!4.34e-07!1;UBERON:0005340!4.34e-07!1;UBERON:0002316!4.34e-07!1;UBERON:0003544!4.34e-07!1;UBERON:0001020!4.34e-07!1;UBERON:0005970!4.34e-07!1;UBERON:0002437!4.34e-07!1;UBERON:0002680!5.25e-07!9;UBERON:0001895!5.25e-07!9;UBERON:0010092!5.25e-07!9;UBERON:0004111!7.17e-07!241;UBERON:0000475!7.22e-07!365;UBERON:0002420!9.76e-07!9;UBERON:0007245!9.76e-07!9;UBERON:0010009!9.76e-07!9;UBERON:0010011!9.76e-07!9;UBERON:0000454!9.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0002021;1.71e-14;5!UBERON:0000955;2.46e-07;68!UBERON:0000073;2.49e-07;53!UBERON:0002616;2.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.76e-45,6;UBERON:0006215,9.76e-45,6;UBERON:0002680,2.66e-30,9;UBERON:0001895,2.66e-30,9;UBERON:0010092,2.66e-30,9;UBERON:0004733,4.59e-23,12;UBERON:0002028,4.59e-23,12;UBERON:0007277,4.59e-23,12;UBERON:0004732,2.16e-21,13;UBERON:0003076,1.04e-18,15;UBERON:0003057,1.04e-18,15;UBERON:0002021,1.83e-14,5;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p28@TMEM178 | |||
}} |
Latest revision as of 05:17, 17 September 2015
Short description: | p28@TMEM178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_TMEM178_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 320bp_to_DQ890996_5end |
EntrezGene: | TMEM178 |
HGNC: | 28517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.76e-45 | 6 |
rhombic lip | 9.76e-45 | 6 |
regional part of metencephalon | 2.66e-30 | 9 |
metencephalon | 2.66e-30 | 9 |
future metencephalon | 2.66e-30 | 9 |
segmental subdivision of hindbrain | 4.59e-23 | 12 |
hindbrain | 4.59e-23 | 12 |
presumptive hindbrain | 4.59e-23 | 12 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
posterior neural tube | 1.04e-18 | 15 |
chordal neural plate | 1.04e-18 | 15 |
occipital lobe | 1.83e-14 | 5 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |