FFCP PHASE1:Mm9::chr11:5966374..5966387,-: Difference between revisions
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{{FFCP|EntrezGene=12323|HGNC=|MCL_coexpression_id=328|UniProt=|association_with_transcript=-9bp_to_ENSMUST00000123391_5end|description=CAGE_peak_8_at_Camk2b_5end|id=chr11:5966374..5966387,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!8.21e-17!50;UBERON:0006238!8.21e-17!50;UBERON:0000956!4.28e-16!21;UBERON:0001869!4.28e-16!21;UBERON:0000203!4.28e-16!21;UBERON:0002791!5.22e-16!29;UBERON:0003528!5.22e-16!29;UBERON:0001893!5.22e-16!29;UBERON:0002021!5.70e-16!10;UBERON:0000411!5.70e-16!10;UBERON:0001950!5.70e-16!10;UBERON:0002616!1.50e-15!49;UBERON:0003080!5.52e-15!40;UBERON:0002020!1.43e-14!34;UBERON:0001049!4.63e-14!52;UBERON:0005068!4.63e-14!52;UBERON:0006241!4.63e-14!52;UBERON:0007135!4.63e-14!52;UBERON:0002780!6.22e-14!39;UBERON:0001890!6.22e-14!39;UBERON:0006240!6.22e-14!39;UBERON:0002619!4.42e-13!17;UBERON:0001017!1.03e-12!73;UBERON:0005743!1.03e-12!73;UBERON:0000073!3.47e-12!75;UBERON:0001016!3.47e-12!75;UBERON:0000033!5.27e-12!63;UBERON:0003056!3.05e-11!49;UBERON:0002346!1.07e-08!71;UBERON:0003075!1.07e-08!71;UBERON:0007284!1.07e-08!71;UBERON:0007811!3.72e-07!86;UBERON:0004121!3.74e-07!102;UBERON:0000924!3.74e-07!102;UBERON:0006601!3.74e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.87e-37,10;UBERON:0000411,2.87e-37,10;UBERON:0001950,2.87e-37,10;UBERON:0002619,2.16e-32,17;UBERON:0000956,7.70e-31,21;UBERON:0001869,7.70e-31,21;UBERON:0000203,7.70e-31,21;UBERON:0003528,6.31e-26,29;UBERON:0002791,6.31e-26,29;UBERON:0001893,6.31e-26,29;UBERON:0002780,3.95e-25,39;UBERON:0001890,3.95e-25,39;UBERON:0006240,3.95e-25,39;UBERON:0003080,1.90e-24,40;UBERON:0000955,1.76e-23,47;UBERON:0006238,1.76e-23,47;UBERON:0002020,7.95e-22,34;UBERON:0002616,5.74e-21,46;UBERON:0000073,4.30e-20,54;UBERON:0003056,1.51e-19,49;UBERON:0001049,2.75e-18,52;UBERON:0005068,2.75e-18,52;UBERON:0006241,2.75e-18,52;UBERON:0007135,2.75e-18,52;UBERON:0001017,2.67e-16,73;UBERON:0001016,8.47e-16,75;UBERON:0002346,1.99e-14,64;UBERON:0003075,1.99e-14,64;UBERON:0007284,1.99e-14,64;UBERON:0010371,2.32e-12,73;UBERON:0004121,6.13e-12,95;UBERON:0000924,6.13e-12,95;UBERON:0006601,6.13e-12,95;UBERON:0010314,2.58e-09,92;UBERON:0000025,4.81e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,1.53224805702225,0.614426133024974,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,8.23501085073528,0.125654352112864,2.08589184230732,3.3243009452943,1.45451631191692,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2952255250791,2.98423375899925,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,4.58316410751517,4.1244763762485,0,2.2661816921691,1.35004500046361,4.95353323546643,1.35942722695261,3.62432218226274,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0|short_description=p8@Camk2b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12323 | |||
|HGNC= | |||
|MCL_coexpression_id=328 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENSMUST00000123391_5end | |||
|cluster_id=chr11:5966374..5966387,- | |||
|description=CAGE_peak_8_at_Camk2b_5end | |||
|id=chr11:5966374..5966387,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!8.21e-17!50;UBERON:0006238!8.21e-17!50;UBERON:0000956!4.28e-16!21;UBERON:0001869!4.28e-16!21;UBERON:0000203!4.28e-16!21;UBERON:0002791!5.22e-16!29;UBERON:0003528!5.22e-16!29;UBERON:0001893!5.22e-16!29;UBERON:0002021!5.70e-16!10;UBERON:0000411!5.70e-16!10;UBERON:0001950!5.70e-16!10;UBERON:0002616!1.50e-15!49;UBERON:0003080!5.52e-15!40;UBERON:0002020!1.43e-14!34;UBERON:0001049!4.63e-14!52;UBERON:0005068!4.63e-14!52;UBERON:0006241!4.63e-14!52;UBERON:0007135!4.63e-14!52;UBERON:0002780!6.22e-14!39;UBERON:0001890!6.22e-14!39;UBERON:0006240!6.22e-14!39;UBERON:0002619!4.42e-13!17;UBERON:0001017!1.03e-12!73;UBERON:0005743!1.03e-12!73;UBERON:0000073!3.47e-12!75;UBERON:0001016!3.47e-12!75;UBERON:0000033!5.27e-12!63;UBERON:0003056!3.05e-11!49;UBERON:0002346!1.07e-08!71;UBERON:0003075!1.07e-08!71;UBERON:0007284!1.07e-08!71;UBERON:0007811!3.72e-07!86;UBERON:0004121!3.74e-07!102;UBERON:0000924!3.74e-07!102;UBERON:0006601!3.74e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.87e-37,10;UBERON:0000411,2.87e-37,10;UBERON:0001950,2.87e-37,10;UBERON:0002619,2.16e-32,17;UBERON:0000956,7.70e-31,21;UBERON:0001869,7.70e-31,21;UBERON:0000203,7.70e-31,21;UBERON:0003528,6.31e-26,29;UBERON:0002791,6.31e-26,29;UBERON:0001893,6.31e-26,29;UBERON:0002780,3.95e-25,39;UBERON:0001890,3.95e-25,39;UBERON:0006240,3.95e-25,39;UBERON:0003080,1.90e-24,40;UBERON:0000955,1.76e-23,47;UBERON:0006238,1.76e-23,47;UBERON:0002020,7.95e-22,34;UBERON:0002616,5.74e-21,46;UBERON:0000073,4.30e-20,54;UBERON:0003056,1.51e-19,49;UBERON:0001049,2.75e-18,52;UBERON:0005068,2.75e-18,52;UBERON:0006241,2.75e-18,52;UBERON:0007135,2.75e-18,52;UBERON:0001017,2.67e-16,73;UBERON:0001016,8.47e-16,75;UBERON:0002346,1.99e-14,64;UBERON:0003075,1.99e-14,64;UBERON:0007284,1.99e-14,64;UBERON:0010371,2.32e-12,73;UBERON:0004121,6.13e-12,95;UBERON:0000924,6.13e-12,95;UBERON:0006601,6.13e-12,95;UBERON:0010314,2.58e-09,92;UBERON:0000025,4.81e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,1.53224805702225,0.614426133024974,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,8.23501085073528,0.125654352112864,2.08589184230732,3.3243009452943,1.45451631191692,1.46017136760982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2952255250791,2.98423375899925,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,4.58316410751517,4.1244763762485,0,2.2661816921691,1.35004500046361,4.95353323546643,1.35942722695261,3.62432218226274,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0,0.145346416632329,0,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0,0,0,0 | |||
|short_description=p8@Camk2b | |||
}} |
Latest revision as of 19:45, 1 October 2015
Short description: | p8@Camk2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Camk2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:328 |
Association with transcript: | -9bp_to_ENSMUST00000123391_5end |
EntrezGene: | Camk2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.87e-37 | 10 |
visual cortex | 2.87e-37 | 10 |
neocortex | 2.87e-37 | 10 |
regional part of cerebral cortex | 2.16e-32 | 17 |
cerebral cortex | 7.70e-31 | 21 |
cerebral hemisphere | 7.70e-31 | 21 |
pallium | 7.70e-31 | 21 |
brain grey matter | 6.31e-26 | 29 |
regional part of telencephalon | 6.31e-26 | 29 |
telencephalon | 6.31e-26 | 29 |
regional part of forebrain | 3.95e-25 | 39 |
forebrain | 3.95e-25 | 39 |
future forebrain | 3.95e-25 | 39 |
anterior neural tube | 1.90e-24 | 40 |
brain | 1.76e-23 | 47 |
future brain | 1.76e-23 | 47 |
gray matter | 7.95e-22 | 34 |
regional part of brain | 5.74e-21 | 46 |
regional part of nervous system | 4.30e-20 | 54 |
pre-chordal neural plate | 1.51e-19 | 49 |
neural tube | 2.75e-18 | 52 |
neural rod | 2.75e-18 | 52 |
future spinal cord | 2.75e-18 | 52 |
neural keel | 2.75e-18 | 52 |
central nervous system | 2.67e-16 | 73 |
nervous system | 8.47e-16 | 75 |
neurectoderm | 1.99e-14 | 64 |
neural plate | 1.99e-14 | 64 |
presumptive neural plate | 1.99e-14 | 64 |
ecto-epithelium | 2.32e-12 | 73 |
ectoderm-derived structure | 6.13e-12 | 95 |
ectoderm | 6.13e-12 | 95 |
presumptive ectoderm | 6.13e-12 | 95 |
structure with developmental contribution from neural crest | 2.58e-09 | 92 |
tube | 4.81e-07 | 114 |