FFCP PHASE1:Hg19::chr3:10517678..10517685,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:10517678..10517685,+ | |||
|coexpression_cluster_id=C1623 | |||
|description=CAGE_peak_at_chr3:10517678..10517685,+ | |||
|id=chr3:10517678..10517685,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.66e-72!42;CL:0000860!2.14e-66!45;CL:0002009!4.11e-64!65;CL:0002194!7.67e-60!63;CL:0000576!7.67e-60!63;CL:0000040!7.67e-60!63;CL:0000559!7.67e-60!63;CL:0000557!1.24e-57!71;CL:0000766!1.03e-52!76;CL:0000839!1.19e-52!70;CL:0000738!7.92e-49!140;CL:0002087!1.79e-42!119;CL:0000763!1.42e-41!112;CL:0000049!1.42e-41!112;CL:0002031!1.02e-40!124;CL:0000037!3.03e-38!172;CL:0000566!3.03e-38!172;CL:0002032!5.68e-36!165;CL:0000837!5.68e-36!165;CL:0000988!3.09e-35!182;CL:0000990!1.86e-16!8;CL:0000451!1.89e-16!10;CL:0000453!1.60e-13!5;CL:0000134!1.07e-10!358;CL:0002320!3.37e-10!365;CL:0000840!1.49e-09!5;CL:0001029!1.49e-09!5;CL:0000219!1.84e-08!390;CL:0002393!9.46e-07!9;CL:0002397!9.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-71;33!CL:0002057;4.43e-71;33!CL:0000473;8.89e-61;39!CL:0000234;8.89e-61;39!CL:0000576;3.06e-47;48!CL:0000766;9.55e-33;69!CL:0000453;3.03e-29;5!CL:0000990;3.65e-16;8!CL:0000451;3.50e-13;10!CL:0001014;1.77e-12;2!CL:0001016;1.77e-12;2!CL:0000763;3.07e-12;100!CL:0002087;5.98e-10;104!CL:0000738;2.61e-09;136!CL:0002393;7.39e-09;6!CL:0002397;7.39e-09;6!CL:0000988;1.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.43e-85,48;CL:0000234,1.43e-85,48;CL:0000860,1.62e-84,42;CL:0002057,1.62e-84,42;CL:0002009,2.25e-75,61;CL:0000557,3.23e-68,67;CL:0002194,2.37e-67,59;CL:0000576,2.37e-67,59;CL:0000040,2.37e-67,59;CL:0000559,2.37e-67,59;CL:0000839,9.82e-60,66;CL:0000766,1.35e-58,72;CL:0000763,1.31e-53,108;CL:0000049,1.31e-53,108;CL:0000738,3.92e-44,136;CL:0002031,1.87e-38,120;CL:0002032,2.24e-36,161;CL:0000837,2.24e-36,161;CL:0002087,1.08e-34,115;CL:0000037,1.30e-34,168;CL:0000988,1.50e-32,177;CL:0000453,2.96e-29,5;CL:0000990,3.60e-16,8;CL:0000451,3.47e-13,10;CL:0000134,3.71e-13,354;CL:0002320,8.90e-13,361;CL:0001014,1.77e-12,2;CL:0001016,1.77e-12,2;CL:0000219,1.94e-11,386;CL:0000034,3.77e-10,441;CL:0002393,4.29e-10,9;CL:0002397,4.29e-10,9;CL:0000048,8.52e-10,427;CL:0000723,1.44e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.14e-61;42!CL:0000049;1.70e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.30e-52!80;UBERON:0001474!1.17e-47!86;UBERON:0002390!7.17e-46!102;UBERON:0003061!7.17e-46!102;UBERON:0002193!1.89e-42!112;UBERON:0004765!1.21e-38!101;UBERON:0001434!1.21e-38!101;UBERON:0002405!2.03e-37!115;UBERON:0002204!2.64e-19!167;UBERON:0003081!1.77e-14!216;UBERON:0002384!1.60e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-59,76;UBERON:0001474,7.56e-55,82;UBERON:0004765,1.62e-49,90;UBERON:0002405,9.46e-48,93;UBERON:0002390,4.80e-45,98;UBERON:0003061,4.80e-45,98;UBERON:0001434,4.88e-44,100;UBERON:0002193,2.24e-40,108;UBERON:0002204,3.99e-24,167;UBERON:0003081,8.15e-19,203;UBERON:0002384,2.94e-12,371;UBERON:0000926,5.22e-10,315;UBERON:0004120,5.22e-10,315;UBERON:0006603,5.22e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,1.70297735647684,0,0,0,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0.257575567634187,0.436194716338694,2.64513160582167,1.69808842831471,0.929716147622738,2.87817521615278,1.54853185447552,1.7261543539329,1.5369642391746,0.709446689665756,1.72372840368309,0.645484683583826,4.06279459783025,0.376484679085209,2.72906150057846,1.34834090667051,0.918251677112708,0.962787081228281,2.55734850319616,0.659702600373432,2.39356389145958,3.83602275479425,1.16083695451434,3.97169657283798,8.71951148593805,0.251248665256743,2.08593167368081,1.08594422352558,0,1.47311054395026,3.48108626184973,1.69004229049553,2.33864729961548,1.88692780957538,0.898629049171961,1.35159203557356,1.92870704036496,0,0.59675003159727,1.64397738388171,0,0,0.889509253863555,1.28019066769952,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,0,0,1.05353633910031,0,0,0,0,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.390178042679635,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,6.08118903205952,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,12.3735640353325,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.40469173589676,4.25167489002762,7.36044274151299,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:10517678..10517685,+ | |||
}} |
Latest revision as of 13:56, 29 July 2015
Short description: | p@chr3:10517678..10517685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:10517678..10517685, + |
Coexpression cluster: | C1623_immature_migratory_CD14_xeroderma_Dendritic_CD19_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-59 | 76 |
bone element | 7.56e-55 | 82 |
skeletal element | 1.62e-49 | 90 |
immune system | 9.46e-48 | 93 |
hematopoietic system | 4.80e-45 | 98 |
blood island | 4.80e-45 | 98 |
skeletal system | 4.88e-44 | 100 |
hemolymphoid system | 2.24e-40 | 108 |
musculoskeletal system | 3.99e-24 | 167 |
lateral plate mesoderm | 8.15e-19 | 203 |
connective tissue | 2.94e-12 | 371 |
mesoderm | 5.22e-10 | 315 |
mesoderm-derived structure | 5.22e-10 | 315 |
presumptive mesoderm | 5.22e-10 | 315 |