FFCP PHASE1:Hg19::chr3:147139238..147139247,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=124bp_to_ENST00000474034_5end | |||
|cluster_id=chr3:147139238..147139247,+ | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_26_at_ZIC1_5end | |||
|id=chr3:147139238..147139247,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.42e-16!3;CL:0005012!1.42e-16!3;CL:0000067!1.42e-16!3;CL:0002304!1.42e-16!3;CL:0002590!2.78e-16!3;CL:0002603!5.41e-16!3;CL:0002575!1.24e-11!2;CL:0002549!2.20e-11!2;CL:0000708!5.93e-08!3;CL:0000128!4.09e-07!7;CL:0000126!4.09e-07!7;CL:0000127!4.09e-07!7;CL:0002453!4.09e-07!7;CL:0002561!9.81e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.78e-195;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!6.04e-37!11;UBERON:0006876!6.04e-37!11;UBERON:0004733!3.99e-33!12;UBERON:0002028!3.99e-33!12;UBERON:0007277!3.99e-33!12;UBERON:0003076!2.98e-32!15;UBERON:0003057!2.98e-32!15;UBERON:0002037!2.55e-31!6;UBERON:0006215!2.55e-31!6;UBERON:0004732!1.85e-30!13;UBERON:0002680!8.58e-28!9;UBERON:0001895!8.58e-28!9;UBERON:0010092!8.58e-28!9;UBERON:0002616!5.86e-26!59;UBERON:0005284!6.77e-26!5;UBERON:0003075!6.40e-23!86;UBERON:0007284!6.40e-23!86;UBERON:0002346!1.07e-21!90;UBERON:0001017!1.33e-21!82;UBERON:0000488!2.39e-21!4;UBERON:0000955!2.85e-21!69;UBERON:0006238!2.85e-21!69;UBERON:0005743!2.09e-20!86;UBERON:0000033!1.06e-19!123;UBERON:0004121!1.50e-18!169;UBERON:0000153!1.52e-18!129;UBERON:0007811!1.52e-18!129;UBERON:0000073!4.48e-18!94;UBERON:0001016!4.48e-18!94;UBERON:0000924!5.51e-18!173;UBERON:0006601!5.51e-18!173;UBERON:0001778!1.42e-16!3;UBERON:0001775!1.42e-16!3;UBERON:0007625!2.52e-16!11;UBERON:0001049!4.90e-16!57;UBERON:0005068!4.90e-16!57;UBERON:0006241!4.90e-16!57;UBERON:0007135!4.90e-16!57;UBERON:0002203!2.79e-14!6;UBERON:0001768!2.79e-14!6;UBERON:0001801!1.06e-12!14;UBERON:0003947!2.20e-11!2;UBERON:0005629!2.20e-11!2;UBERON:0005358!2.20e-11!2;UBERON:0001886!2.20e-11!2;UBERON:0004086!2.20e-11!2;UBERON:0005282!2.20e-11!2;UBERON:0005281!2.20e-11!2;UBERON:0000119!7.93e-11!312;UBERON:0005085!3.14e-10!29;UBERON:0000019!3.37e-09!19;UBERON:0000047!3.37e-09!19;UBERON:0004088!3.37e-09!19;UBERON:0003072!3.37e-09!19;UBERON:0003071!3.37e-09!19;UBERON:0004128!3.37e-09!19;UBERON:0000483!4.05e-09!309;UBERON:0000970!1.04e-08!20;UBERON:0000063!1.30e-08!97;UBERON:0002104!2.90e-08!21;UBERON:0001456!2.90e-08!21;UBERON:0000475!3.23e-08!365;UBERON:0003210!5.93e-08!3;UBERON:0002300!7.28e-08!3;UBERON:0003056!1.47e-07!61;UBERON:0000020!1.72e-07!23;UBERON:0002771!2.20e-07!3;UBERON:0001896!3.04e-07!3;UBERON:0005290!3.04e-07!3;UBERON:0010096!3.04e-07!3;UBERON:0001032!3.74e-07!24;UBERON:0004456!3.74e-07!24;UBERON:0000064!5.43e-07!219;UBERON:0005933!9.81e-07!1;UBERON:0005942!9.81e-07!1;UBERON:0005932!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.18e-09;53!UBERON:0002616;8.18e-09;53!UBERON:0001016;9.26e-08;83!UBERON:0000955;1.64e-07;68!UBERON:0001017;8.54e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,1.65868889896837,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p26@ZIC1 | |||
}} |
Latest revision as of 19:27, 15 September 2015
Short description: | p26@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_ZIC1_5end |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | 124bp_to_ENST00000474034_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |