FFCP PHASE1:Mm9::chr13:41582675..41582715,-: Difference between revisions
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{{FFCP|EntrezGene=18003|HGNC=|MCL_coexpression_id=177|UniProt=O35177|association_with_transcript=0bp_to_ENSMUST00000021794,NM_001111324,uc007qfe.2_5end|description=CAGE_peak_2_at_Nedd9_5end|id=chr13:41582675..41582715,-|ontology_enrichment_celltype=CL:0000838!2.43e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,1.25e-07,12;CL:0000084,5.80e-07,11;CL:0000827,5.80e-07,11;CL:0000791,7.02e-07,9;CL:0000789,7.02e-07,9;CL:0002420,7.02e-07,9;CL:0002419,7.02e-07,9;CL:0000790,7.02e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.77e-14!70;UBERON:0002193!5.67e-13!48;UBERON:0000926!1.79e-12!193;UBERON:0004120!1.79e-12!193;UBERON:0006603!1.79e-12!193;UBERON:0003104!1.04e-11!131;UBERON:0009142!1.04e-11!131;UBERON:0002390!1.09e-11!45;UBERON:0003061!1.09e-11!45;UBERON:0005057!2.09e-11!51;UBERON:0004177!4.21e-11!29;UBERON:0003081!7.46e-11!88;UBERON:0000077!1.96e-10!97;UBERON:0001041!2.47e-10!92;UBERON:0003408!1.89e-08!24;UBERON:0001007!1.93e-08!128;UBERON:0001555!1.93e-08!128;UBERON:0007026!1.93e-08!128;UBERON:0004119!2.53e-08!130;UBERON:0000925!2.53e-08!130;UBERON:0006595!2.53e-08!130;UBERON:0001004!2.99e-08!42;UBERON:0006562!4.26e-08!24;UBERON:0001557!4.26e-08!24;UBERON:0001042!4.26e-08!24;UBERON:0008814!4.26e-08!24;UBERON:0009145!4.26e-08!24;UBERON:0002370!4.43e-08!23;UBERON:0000974!4.43e-08!23;UBERON:0004807!4.43e-08!23;UBERON:0005058!4.43e-08!23;UBERON:0003351!4.43e-08!23;UBERON:0009113!4.43e-08!23;UBERON:0003295!4.43e-08!23;UBERON:0009722!4.43e-08!23;UBERON:0005562!4.43e-08!23;UBERON:0007690!4.43e-08!23;UBERON:0004921!6.37e-08!126;UBERON:0004185!6.37e-08!126;UBERON:0000065!6.62e-08!41;UBERON:0001048!2.57e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.11e-14,48;UBERON:0002405,9.11e-14,48;UBERON:0002390,2.06e-12,45;UBERON:0003061,2.06e-12,45;UBERON:0004177,3.72e-12,29;UBERON:0005057,3.72e-12,29;UBERON:0000077,7.13e-12,35;UBERON:0001041,1.58e-11,80;UBERON:0003081,6.98e-11,87;UBERON:0001007,1.24e-09,116;UBERON:0001555,1.24e-09,116;UBERON:0007026,1.24e-09,116;UBERON:0001004,1.45e-09,42;UBERON:0004119,1.76e-09,118;UBERON:0000925,1.76e-09,118;UBERON:0006595,1.76e-09,118;UBERON:0003408,2.46e-09,24;UBERON:0000065,3.45e-09,41;UBERON:0004921,4.65e-09,114;UBERON:0006562,5.95e-09,24;UBERON:0001557,5.95e-09,24;UBERON:0001042,5.95e-09,24;UBERON:0008814,5.95e-09,24;UBERON:0009145,5.95e-09,24;UBERON:0002370,6.07e-09,23;UBERON:0000974,6.07e-09,23;UBERON:0004807,6.07e-09,23;UBERON:0005058,6.07e-09,23;UBERON:0003351,6.07e-09,23;UBERON:0009113,6.07e-09,23;UBERON:0003295,6.07e-09,23;UBERON:0009722,6.07e-09,23;UBERON:0005562,6.07e-09,23;UBERON:0007690,6.07e-09,23;UBERON:0000926,3.12e-08,120;UBERON:0004120,3.12e-08,120;UBERON:0006603,3.12e-08,120;UBERON:0005911,2.01e-07,69|phase1_expression=0,0,0,0,0,0,0,67.4023748365028,79.9679941821467,87.0720037917816,38.0103889460621,26.4045846274564,101.522032849205,94.7637162221932,35.3096347524602,31.7886169802027,4.19737126876888,177.920661262046,210.059312283992,154.053443602685,6.71841992193451,6.85107563286109,3.39559725880616,8.63959083084396,8.02932483735095,0,0,0,0.950117097281869,1.51218077855958,1.77384408524244,0,0,0,0,0,0,279.997660962991,122.669649090237,219.879972468995,361.174133651043,309.419604686176,258.777018165605,0,0,0,0,0,0,0.388859798148567,0,0,133.219389209843,85.5927327573386,75.2850110079119,8.2323019531503,6.30373567865265,6.70373719960675,0.202316460859598,0,0,0,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0,0.103689612308478,0.270011876663381,0,0,0.441737081903227,0.367472397644862,0.191690942036473,0,0,0.383062014255563,0,0.131886287730194,0.182975287204819,0,0.837548997004143,0.56276261003168,0.45839474333043,0.883885756421003,0.427115042397309,0.186399445825301,0.37863096666592,0,20.5803786978191,5.16254326188832,0,0,0.649776417447669,0.896053774194671,12.2186645514624,0,0,0,0,0,0,0,0,0,0,8.90634261808668,414.559551719122,6.23456984072264,0.867426633830679,2.13125834818499,1.38369298353635,1.20578112442098,2.93971767839262,1.88499886994513,1.73036477414062,10.2665543413137,50.4228014611428,7.44127509758082,26.2801406967868,25.2135131630315,9.31958806090611,1.46390398505774,0,5.8755122697976,7.30872259486114,1.19980546198682,10.1656181658452,0.449371918214468,0.457500602818626,0.125654352112864,0.695297280769106,0.767146371990992,0.62336413367868,1.29793010454206,1.42575109390443,33.7142890353352,1.0108910337347,1.26265113531884,1.43132487258974,0,0.900310649026746,1.35634336052144,0.816437989815934,0.384341160854549,0.468508622798644,0.776110112217047,0,0.945530400839096,0.351902248327898,0.219195732427575,1.11218899690239,3.48252166522167,2.26360350048738,0.398068533636986,7.72434506044558,9.26452465612975,12.2190304740105,0.414251545071004,1.64168241986767,0.540186184383045,1.65721314909647,2.75469924446365,1.07986979021165,2.09280550275367,1.60964040839772,3.26942958628075,2.79751744852917,5.91002870684743,4.78305976320549,6.87139940899062,5.04965265169416,6.97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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18003 | |||
|HGNC= | |||
|MCL_coexpression_id=177 | |||
|TSSclassifier=NA | |||
|UniProt=O35177 | |||
|association_with_transcript=0bp_to_ENSMUST00000021794,NM_001111324,uc007qfe.2_5end | |||
|cluster_id=chr13:41582675..41582715,- | |||
|description=CAGE_peak_2_at_Nedd9_5end | |||
|id=chr13:41582675..41582715,- | |||
|ontology_enrichment_celltype=CL:0000838!2.43e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.25e-07,12;CL:0000084,5.80e-07,11;CL:0000827,5.80e-07,11;CL:0000791,7.02e-07,9;CL:0000789,7.02e-07,9;CL:0002420,7.02e-07,9;CL:0002419,7.02e-07,9;CL:0000790,7.02e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.77e-14!70;UBERON:0002193!5.67e-13!48;UBERON:0000926!1.79e-12!193;UBERON:0004120!1.79e-12!193;UBERON:0006603!1.79e-12!193;UBERON:0003104!1.04e-11!131;UBERON:0009142!1.04e-11!131;UBERON:0002390!1.09e-11!45;UBERON:0003061!1.09e-11!45;UBERON:0005057!2.09e-11!51;UBERON:0004177!4.21e-11!29;UBERON:0003081!7.46e-11!88;UBERON:0000077!1.96e-10!97;UBERON:0001041!2.47e-10!92;UBERON:0003408!1.89e-08!24;UBERON:0001007!1.93e-08!128;UBERON:0001555!1.93e-08!128;UBERON:0007026!1.93e-08!128;UBERON:0004119!2.53e-08!130;UBERON:0000925!2.53e-08!130;UBERON:0006595!2.53e-08!130;UBERON:0001004!2.99e-08!42;UBERON:0006562!4.26e-08!24;UBERON:0001557!4.26e-08!24;UBERON:0001042!4.26e-08!24;UBERON:0008814!4.26e-08!24;UBERON:0009145!4.26e-08!24;UBERON:0002370!4.43e-08!23;UBERON:0000974!4.43e-08!23;UBERON:0004807!4.43e-08!23;UBERON:0005058!4.43e-08!23;UBERON:0003351!4.43e-08!23;UBERON:0009113!4.43e-08!23;UBERON:0003295!4.43e-08!23;UBERON:0009722!4.43e-08!23;UBERON:0005562!4.43e-08!23;UBERON:0007690!4.43e-08!23;UBERON:0004921!6.37e-08!126;UBERON:0004185!6.37e-08!126;UBERON:0000065!6.62e-08!41;UBERON:0001048!2.57e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.11e-14,48;UBERON:0002405,9.11e-14,48;UBERON:0002390,2.06e-12,45;UBERON:0003061,2.06e-12,45;UBERON:0004177,3.72e-12,29;UBERON:0005057,3.72e-12,29;UBERON:0000077,7.13e-12,35;UBERON:0001041,1.58e-11,80;UBERON:0003081,6.98e-11,87;UBERON:0001007,1.24e-09,116;UBERON:0001555,1.24e-09,116;UBERON:0007026,1.24e-09,116;UBERON:0001004,1.45e-09,42;UBERON:0004119,1.76e-09,118;UBERON:0000925,1.76e-09,118;UBERON:0006595,1.76e-09,118;UBERON:0003408,2.46e-09,24;UBERON:0000065,3.45e-09,41;UBERON:0004921,4.65e-09,114;UBERON:0006562,5.95e-09,24;UBERON:0001557,5.95e-09,24;UBERON:0001042,5.95e-09,24;UBERON:0008814,5.95e-09,24;UBERON:0009145,5.95e-09,24;UBERON:0002370,6.07e-09,23;UBERON:0000974,6.07e-09,23;UBERON:0004807,6.07e-09,23;UBERON:0005058,6.07e-09,23;UBERON:0003351,6.07e-09,23;UBERON:0009113,6.07e-09,23;UBERON:0003295,6.07e-09,23;UBERON:0009722,6.07e-09,23;UBERON:0005562,6.07e-09,23;UBERON:0007690,6.07e-09,23;UBERON:0000926,3.12e-08,120;UBERON:0004120,3.12e-08,120;UBERON:0006603,3.12e-08,120;UBERON:0005911,2.01e-07,69 | |||
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| |||
|short_description=p2@Nedd9 | |||
}} |
Latest revision as of 14:43, 1 October 2015
Short description: | p2@Nedd9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nedd9_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 0bp_to_ENSMUST00000021794, NM_001111324, uc007qfe.2_5end |
EntrezGene: | Nedd9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.25e-07 | 12 |
T cell | 5.80e-07 | 11 |
pro-T cell | 5.80e-07 | 11 |
mature alpha-beta T cell | 7.02e-07 | 9 |
alpha-beta T cell | 7.02e-07 | 9 |
immature T cell | 7.02e-07 | 9 |
mature T cell | 7.02e-07 | 9 |
immature alpha-beta T cell | 7.02e-07 | 9 |