FFCP PHASE1:Mm9::chr14:13177352..13177360,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:13177352..13177360,-|id=chr14:13177352..13177360,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002605,5.87e-07,2;CL:0002604,5.87e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.03e-27!21;UBERON:0001869!1.03e-27!21;UBERON:0000203!1.03e-27!21;UBERON:0003056!1.08e-27!49;UBERON:0007811!1.32e-24!86;UBERON:0000033!5.33e-22!63;UBERON:0000153!7.06e-22!94;UBERON:0002791!2.24e-21!29;UBERON:0003528!2.24e-21!29;UBERON:0001893!2.24e-21!29;UBERON:0002780!9.58e-21!39;UBERON:0001890!9.58e-21!39;UBERON:0006240!9.58e-21!39;UBERON:0003080!4.23e-20!40;UBERON:0002619!2.43e-19!17;UBERON:0002346!8.67e-19!71;UBERON:0003075!8.67e-19!71;UBERON:0007284!8.67e-19!71;UBERON:0002020!1.35e-17!34;UBERON:0002616!2.70e-17!49;UBERON:0000955!7.61e-17!50;UBERON:0006238!7.61e-17!50;UBERON:0001049!5.38e-16!52;UBERON:0005068!5.38e-16!52;UBERON:0006241!5.38e-16!52;UBERON:0007135!5.38e-16!52;UBERON:0002021!1.08e-11!10;UBERON:0000411!1.08e-11!10;UBERON:0001950!1.08e-11!10;UBERON:0004121!4.04e-11!102;UBERON:0000924!4.04e-11!102;UBERON:0006601!4.04e-11!102;UBERON:0000064!2.41e-10!99;UBERON:0001017!6.47e-10!73;UBERON:0005743!6.47e-10!73;UBERON:0000073!1.62e-09!75;UBERON:0001016!1.62e-09!75;UBERON:0001954!4.82e-09!7;UBERON:0003022!4.82e-09!7;UBERON:0002421!4.82e-09!7;UBERON:0000349!4.82e-09!7;UBERON:0002600!4.82e-09!7;UBERON:0000970!1.62e-08!9;UBERON:0000019!1.62e-08!9;UBERON:0000047!1.62e-08!9;UBERON:0004088!1.62e-08!9;UBERON:0002104!1.62e-08!9;UBERON:0001456!1.62e-08!9;UBERON:0003072!1.62e-08!9;UBERON:0003071!1.62e-08!9;UBERON:0004128!1.62e-08!9;UBERON:0000483!9.73e-08!181;UBERON:0000119!1.43e-07!183;UBERON:0000475!6.34e-07!200;UBERON:0001444!7.65e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.45e-25,21;UBERON:0001869,1.45e-25,21;UBERON:0000203,1.45e-25,21;UBERON:0002619,3.22e-23,17;UBERON:0003528,1.50e-18,29;UBERON:0002791,1.50e-18,29;UBERON:0001893,1.50e-18,29;UBERON:0002020,7.80e-16,34;UBERON:0001954,6.47e-15,7;UBERON:0003022,6.47e-15,7;UBERON:0002421,6.47e-15,7;UBERON:0000349,6.47e-15,7;UBERON:0002600,6.47e-15,7;UBERON:0002780,8.25e-14,39;UBERON:0001890,8.25e-14,39;UBERON:0006240,8.25e-14,39;UBERON:0003080,1.83e-13,40;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002616,1.04e-11,46;UBERON:0000955,1.85e-11,47;UBERON:0006238,1.85e-11,47;UBERON:0003056,5.45e-11,49;UBERON:0002021,2.01e-10,10;UBERON:0000411,2.01e-10,10;UBERON:0001950,2.01e-10,10;UBERON:0001049,2.36e-10,52;UBERON:0005068,2.36e-10,52;UBERON:0006241,2.36e-10,52;UBERON:0007135,2.36e-10,52;UBERON:0000073,5.73e-10,54;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0010371,2.40e-07,73;UBERON:0001017,2.40e-07,73;UBERON:0001016,3.81e-07,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.630974884054146,0,0,0,0.191690942036473,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73824320192276,1.27857728665165,0,0.162241263067758,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0,0.340182495756639,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr14:13177352..13177360,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:13177352..13177360,- | |||
|description=CAGE_peak_at_chr14:13177352..13177360,- | |||
|id=chr14:13177352..13177360,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.87e-07,2;CL:0002604,5.87e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.03e-27!21;UBERON:0001869!1.03e-27!21;UBERON:0000203!1.03e-27!21;UBERON:0003056!1.08e-27!49;UBERON:0007811!1.32e-24!86;UBERON:0000033!5.33e-22!63;UBERON:0000153!7.06e-22!94;UBERON:0002791!2.24e-21!29;UBERON:0003528!2.24e-21!29;UBERON:0001893!2.24e-21!29;UBERON:0002780!9.58e-21!39;UBERON:0001890!9.58e-21!39;UBERON:0006240!9.58e-21!39;UBERON:0003080!4.23e-20!40;UBERON:0002619!2.43e-19!17;UBERON:0002346!8.67e-19!71;UBERON:0003075!8.67e-19!71;UBERON:0007284!8.67e-19!71;UBERON:0002020!1.35e-17!34;UBERON:0002616!2.70e-17!49;UBERON:0000955!7.61e-17!50;UBERON:0006238!7.61e-17!50;UBERON:0001049!5.38e-16!52;UBERON:0005068!5.38e-16!52;UBERON:0006241!5.38e-16!52;UBERON:0007135!5.38e-16!52;UBERON:0002021!1.08e-11!10;UBERON:0000411!1.08e-11!10;UBERON:0001950!1.08e-11!10;UBERON:0004121!4.04e-11!102;UBERON:0000924!4.04e-11!102;UBERON:0006601!4.04e-11!102;UBERON:0000064!2.41e-10!99;UBERON:0001017!6.47e-10!73;UBERON:0005743!6.47e-10!73;UBERON:0000073!1.62e-09!75;UBERON:0001016!1.62e-09!75;UBERON:0001954!4.82e-09!7;UBERON:0003022!4.82e-09!7;UBERON:0002421!4.82e-09!7;UBERON:0000349!4.82e-09!7;UBERON:0002600!4.82e-09!7;UBERON:0000970!1.62e-08!9;UBERON:0000019!1.62e-08!9;UBERON:0000047!1.62e-08!9;UBERON:0004088!1.62e-08!9;UBERON:0002104!1.62e-08!9;UBERON:0001456!1.62e-08!9;UBERON:0003072!1.62e-08!9;UBERON:0003071!1.62e-08!9;UBERON:0004128!1.62e-08!9;UBERON:0000483!9.73e-08!181;UBERON:0000119!1.43e-07!183;UBERON:0000475!6.34e-07!200;UBERON:0001444!7.65e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.45e-25,21;UBERON:0001869,1.45e-25,21;UBERON:0000203,1.45e-25,21;UBERON:0002619,3.22e-23,17;UBERON:0003528,1.50e-18,29;UBERON:0002791,1.50e-18,29;UBERON:0001893,1.50e-18,29;UBERON:0002020,7.80e-16,34;UBERON:0001954,6.47e-15,7;UBERON:0003022,6.47e-15,7;UBERON:0002421,6.47e-15,7;UBERON:0000349,6.47e-15,7;UBERON:0002600,6.47e-15,7;UBERON:0002780,8.25e-14,39;UBERON:0001890,8.25e-14,39;UBERON:0006240,8.25e-14,39;UBERON:0003080,1.83e-13,40;UBERON:0001851,5.53e-12,1;UBERON:0005889,5.53e-12,1;UBERON:0002616,1.04e-11,46;UBERON:0000955,1.85e-11,47;UBERON:0006238,1.85e-11,47;UBERON:0003056,5.45e-11,49;UBERON:0002021,2.01e-10,10;UBERON:0000411,2.01e-10,10;UBERON:0001950,2.01e-10,10;UBERON:0001049,2.36e-10,52;UBERON:0005068,2.36e-10,52;UBERON:0006241,2.36e-10,52;UBERON:0007135,2.36e-10,52;UBERON:0000073,5.73e-10,54;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0010371,2.40e-07,73;UBERON:0001017,2.40e-07,73;UBERON:0001016,3.81e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,1.75748946187577,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414758449233911,0.405017814995072,0.630974884054146,0,0,0,0.191690942036473,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73824320192276,1.27857728665165,0,0.162241263067758,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0,0.340182495756639,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.515559547031063,0.685082519770642,1.5107877947794,0,0.45032120322422,1.35942722695261,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr14:13177352..13177360,- | |||
}} |
Latest revision as of 01:24, 4 August 2015
Short description: | p@chr14:13177352..13177360, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:13177352..13177360, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.87e-07 | 2 |
astrocyte of the hippocampus | 5.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.45e-25 | 21 |
cerebral hemisphere | 1.45e-25 | 21 |
pallium | 1.45e-25 | 21 |
regional part of cerebral cortex | 3.22e-23 | 17 |
brain grey matter | 1.50e-18 | 29 |
regional part of telencephalon | 1.50e-18 | 29 |
telencephalon | 1.50e-18 | 29 |
gray matter | 7.80e-16 | 34 |
Ammon's horn | 6.47e-15 | 7 |
lobe parts of cerebral cortex | 6.47e-15 | 7 |
hippocampal formation | 6.47e-15 | 7 |
limbic system | 6.47e-15 | 7 |
limbic lobe | 6.47e-15 | 7 |
regional part of forebrain | 8.25e-14 | 39 |
forebrain | 8.25e-14 | 39 |
future forebrain | 8.25e-14 | 39 |
anterior neural tube | 1.83e-13 | 40 |
cortex | 5.53e-12 | 1 |
zygote cortex | 5.53e-12 | 1 |
regional part of brain | 1.04e-11 | 46 |
brain | 1.85e-11 | 47 |
future brain | 1.85e-11 | 47 |
pre-chordal neural plate | 5.45e-11 | 49 |
occipital lobe | 2.01e-10 | 10 |
visual cortex | 2.01e-10 | 10 |
neocortex | 2.01e-10 | 10 |
neural tube | 2.36e-10 | 52 |
neural rod | 2.36e-10 | 52 |
future spinal cord | 2.36e-10 | 52 |
neural keel | 2.36e-10 | 52 |
regional part of nervous system | 5.73e-10 | 54 |
neurectoderm | 2.14e-08 | 64 |
neural plate | 2.14e-08 | 64 |
presumptive neural plate | 2.14e-08 | 64 |
ecto-epithelium | 2.40e-07 | 73 |
central nervous system | 2.40e-07 | 73 |
nervous system | 3.81e-07 | 75 |