FFCP PHASE1:Mm9::chr14:64225328..64225364,+: Difference between revisions
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{{FFCP|EntrezGene=219149|HGNC=|MCL_coexpression_id=367|UniProt=E9Q6C8|association_with_transcript=0bp_to_ENSMUST00000119973_5end|description=CAGE_peak_2_at_Xkr6_5end|id=chr14:64225328..64225364,+|ontology_enrichment_celltype=CL:0000540!3.82e-14!33;CL:0000047!3.82e-14!33;CL:0000031!3.82e-14!33;CL:0000404!3.82e-14!33;CL:0000117!3.60e-11!23;CL:0000337!3.60e-11!23;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000221!7.24e-09!44;CL:0000133!7.24e-09!44;CL:0002319!1.94e-08!43|ontology_enrichment_celltype_v019_2=CL:0000540,2.13e-16,33;CL:0000047,2.13e-16,33;CL:0000031,2.13e-16,33;CL:0000404,2.13e-16,33;CL:0000117,6.87e-13,23;CL:0000337,6.87e-13,23;CL:0000393,1.26e-11,39;CL:0000211,1.26e-11,39;CL:0000221,8.60e-10,44;CL:0000133,8.60e-10,44;CL:0002319,2.69e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.35e-24!71;UBERON:0003075!1.35e-24!71;UBERON:0007284!1.35e-24!71;UBERON:0004121!3.51e-23!102;UBERON:0000924!3.51e-23!102;UBERON:0006601!3.51e-23!102;UBERON:0001017!2.56e-21!73;UBERON:0005743!2.56e-21!73;UBERON:0000073!1.70e-20!75;UBERON:0001016!1.70e-20!75;UBERON:0001049!5.29e-17!52;UBERON:0005068!5.29e-17!52;UBERON:0006241!5.29e-17!52;UBERON:0007135!5.29e-17!52;UBERON:0000033!8.95e-17!63;UBERON:0003056!1.02e-15!49;UBERON:0000955!1.72e-14!50;UBERON:0006238!1.72e-14!50;UBERON:0002616!2.72e-14!49;UBERON:0002020!1.07e-12!34;UBERON:0003080!1.17e-12!40;UBERON:0002780!4.11e-12!39;UBERON:0001890!4.11e-12!39;UBERON:0006240!4.11e-12!39;UBERON:0002791!1.40e-09!29;UBERON:0003528!1.40e-09!29;UBERON:0001893!1.40e-09!29;UBERON:0000468!2.15e-09!333;UBERON:0000153!2.68e-07!94;UBERON:0000025!6.09e-07!114;UBERON:0000922!7.02e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-24,64;UBERON:0003075,2.49e-24,64;UBERON:0007284,2.49e-24,64;UBERON:0001017,7.42e-24,73;UBERON:0004121,1.31e-22,95;UBERON:0000924,1.31e-22,95;UBERON:0006601,1.31e-22,95;UBERON:0001016,1.86e-22,75;UBERON:0010371,4.98e-21,73;UBERON:0000073,1.48e-19,54;UBERON:0001049,6.16e-19,52;UBERON:0005068,6.16e-19,52;UBERON:0006241,6.16e-19,52;UBERON:0007135,6.16e-19,52;UBERON:0010314,1.91e-18,92;UBERON:0003056,3.21e-17,49;UBERON:0000955,6.19e-15,47;UBERON:0006238,6.19e-15,47;UBERON:0002616,1.06e-14,46;UBERON:0002020,4.47e-14,34;UBERON:0003080,1.21e-13,40;UBERON:0002780,5.12e-13,39;UBERON:0001890,5.12e-13,39;UBERON:0006240,5.12e-13,39;UBERON:0003528,1.86e-10,29;UBERON:0002791,1.86e-10,29;UBERON:0001893,1.86e-10,29;UBERON:0002420,9.86e-07,8;UBERON:0007245,9.86e-07,8;UBERON:0010009,9.86e-07,8;UBERON:0010011,9.86e-07,8;UBERON:0000454,9.86e-07,8|phase1_expression=2.7225304007815,0.348975407639361,0,0.30246421130683,0,0.839396359559449,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.46625541438102,0,0,0.639969691173627,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.550640256485045,0,0.436050312760893,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0.257259436035947,0,0.515672092277442,6.06949382578793,6.34789175126439,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,1.55534418462716,1.08004750665353,1.26194976810829,6.85562362569129,5.74258206474195,3.67472397644862,3.73797336971122,1.83843757322004,2.20231761998777,2.17068474744819,2.76491759861238,4.48413378282659,6.67859798297591,5.73004707612436,3.07101298901519,7.87867654044352,2.90316670775939,8.54422897873636,10.1083893367363,6.89677949553612,0.681535739998656,0.453429360640713,2.02905142091174,0.860423876981386,0,1.07940638327563,0,0.896053774194671,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,3.66192891419369,2.56652954828636,0,0,0,0,0,0.79928715803342,0.517875767294343,2.82040064223167,3.81667718885499,1.82679286987285,2.30615497256059,3.01445281105245,3.41007250693544,2.26199864393416,2.47194967734374,0.722996784599558,0,0.485300549842228,0,0,1.86391761218122,14.9318206475889,25.3430515244281,1.53274233125155,0,0,0,4.6435098215495,4.57500602818627,11.0575829859321,5.04090528557602,4.85859368927628,5.40248915854856,5.67844420737152,0.81471491080253,0.124406970610093,0.758168275301024,1.68353484709179,1.69156575851515,1.60931473103431,2.34080768746954,2.10986744970001,3.40182495756639,3.45907044769094,4.77878795254617,8.01980449290949,0.862271971731369,1.89106080167819,3.16712023495108,2.19195732427575,2.50242524303038,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,1.18372367792605,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,1.05088808130453,0.493679549740441,0.820837320395476,0.56748166682099,0.877199924551994,0,0.939444931322602,2.3131894342054,4.93942139420565,0.660837565967596,0.264450566663544,1.70630600428187,1.16118335930219,1.67527699718721,2.42020229548011,2.2237804384487,1.33157938278791,0.474529061544512,0.494096864172033,0.502670417600539,1.39269530428806,0.584892261357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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=219149 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q6C8 | |||
|association_with_transcript=0bp_to_ENSMUST00000119973_5end | |||
|cluster_id=chr14:64225328..64225364,+ | |||
|description=CAGE_peak_2_at_Xkr6_5end | |||
|id=chr14:64225328..64225364,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.82e-14!33;CL:0000047!3.82e-14!33;CL:0000031!3.82e-14!33;CL:0000404!3.82e-14!33;CL:0000117!3.60e-11!23;CL:0000337!3.60e-11!23;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000221!7.24e-09!44;CL:0000133!7.24e-09!44;CL:0002319!1.94e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.13e-16,33;CL:0000047,2.13e-16,33;CL:0000031,2.13e-16,33;CL:0000404,2.13e-16,33;CL:0000117,6.87e-13,23;CL:0000337,6.87e-13,23;CL:0000393,1.26e-11,39;CL:0000211,1.26e-11,39;CL:0000221,8.60e-10,44;CL:0000133,8.60e-10,44;CL:0002319,2.69e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.35e-24!71;UBERON:0003075!1.35e-24!71;UBERON:0007284!1.35e-24!71;UBERON:0004121!3.51e-23!102;UBERON:0000924!3.51e-23!102;UBERON:0006601!3.51e-23!102;UBERON:0001017!2.56e-21!73;UBERON:0005743!2.56e-21!73;UBERON:0000073!1.70e-20!75;UBERON:0001016!1.70e-20!75;UBERON:0001049!5.29e-17!52;UBERON:0005068!5.29e-17!52;UBERON:0006241!5.29e-17!52;UBERON:0007135!5.29e-17!52;UBERON:0000033!8.95e-17!63;UBERON:0003056!1.02e-15!49;UBERON:0000955!1.72e-14!50;UBERON:0006238!1.72e-14!50;UBERON:0002616!2.72e-14!49;UBERON:0002020!1.07e-12!34;UBERON:0003080!1.17e-12!40;UBERON:0002780!4.11e-12!39;UBERON:0001890!4.11e-12!39;UBERON:0006240!4.11e-12!39;UBERON:0002791!1.40e-09!29;UBERON:0003528!1.40e-09!29;UBERON:0001893!1.40e-09!29;UBERON:0000468!2.15e-09!333;UBERON:0000153!2.68e-07!94;UBERON:0000025!6.09e-07!114;UBERON:0000922!7.02e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-24,64;UBERON:0003075,2.49e-24,64;UBERON:0007284,2.49e-24,64;UBERON:0001017,7.42e-24,73;UBERON:0004121,1.31e-22,95;UBERON:0000924,1.31e-22,95;UBERON:0006601,1.31e-22,95;UBERON:0001016,1.86e-22,75;UBERON:0010371,4.98e-21,73;UBERON:0000073,1.48e-19,54;UBERON:0001049,6.16e-19,52;UBERON:0005068,6.16e-19,52;UBERON:0006241,6.16e-19,52;UBERON:0007135,6.16e-19,52;UBERON:0010314,1.91e-18,92;UBERON:0003056,3.21e-17,49;UBERON:0000955,6.19e-15,47;UBERON:0006238,6.19e-15,47;UBERON:0002616,1.06e-14,46;UBERON:0002020,4.47e-14,34;UBERON:0003080,1.21e-13,40;UBERON:0002780,5.12e-13,39;UBERON:0001890,5.12e-13,39;UBERON:0006240,5.12e-13,39;UBERON:0003528,1.86e-10,29;UBERON:0002791,1.86e-10,29;UBERON:0001893,1.86e-10,29;UBERON:0002420,9.86e-07,8;UBERON:0007245,9.86e-07,8;UBERON:0010009,9.86e-07,8;UBERON:0010011,9.86e-07,8;UBERON:0000454,9.86e-07,8 | |||
|phase1_expression=2.7225304007815,0.348975407639361,0,0.30246421130683,0,0.839396359559449,0.233612640595526,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,2.46625541438102,0,0,0.639969691173627,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.550640256485045,0,0.436050312760893,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0.257259436035947,0,0.515672092277442,6.06949382578793,6.34789175126439,5.70448263155561,0,0,0,0,0,0.299600110518405,0.768436610643109,1.55534418462716,1.08004750665353,1.26194976810829,6.85562362569129,5.74258206474195,3.67472397644862,3.73797336971122,1.83843757322004,2.20231761998777,2.17068474744819,2.76491759861238,4.48413378282659,6.67859798297591,5.73004707612436,3.07101298901519,7.87867654044352,2.90316670775939,8.54422897873636,10.1083893367363,6.89677949553612,0.681535739998656,0.453429360640713,2.02905142091174,0.860423876981386,0,1.07940638327563,0,0.896053774194671,0.280888840263504,0.340860645156116,0.519572009205738,0.35333957451034,3.66192891419369,2.56652954828636,0,0,0,0,0,0.79928715803342,0.517875767294343,2.82040064223167,3.81667718885499,1.82679286987285,2.30615497256059,3.01445281105245,3.41007250693544,2.26199864393416,2.47194967734374,0.722996784599558,0,0.485300549842228,0,0,1.86391761218122,14.9318206475889,25.3430515244281,1.53274233125155,0,0,0,4.6435098215495,4.57500602818627,11.0575829859321,5.04090528557602,4.85859368927628,5.40248915854856,5.67844420737152,0.81471491080253,0.124406970610093,0.758168275301024,1.68353484709179,1.69156575851515,1.60931473103431,2.34080768746954,2.10986744970001,3.40182495756639,3.45907044769094,4.77878795254617,8.01980449290949,0.862271971731369,1.89106080167819,3.16712023495108,2.19195732427575,2.50242524303038,0.696504333044333,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0.703578179943289,0.720248245844059,1.18372367792605,0.787056926989615,1.07986979021165,0.930135779001631,0.804820204198858,1.05088808130453,0.493679549740441,0.820837320395476,0.56748166682099,0.877199924551994,0,0.939444931322602,2.3131894342054,4.93942139420565,0.660837565967596,0.264450566663544,1.70630600428187,1.16118335930219,1.67527699718721,2.42020229548011,2.2237804384487,1.33157938278791,0.474529061544512,0.494096864172033,0.502670417600539,1.39269530428806,0.58489226135736,1.79763881730844,0.216138049874694,0.199141273254367,0.379335801906163,0.913988100877831,2.25415471346161,1.22190796707189,0.969762435838129,1.26244475802573,1.13825766823663,0.885660887877613,1.41298855057237,0.740382983530803,1.48226313543574,1.00107063429656,0.786235980452812,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,1.15078454980324,1.13494658742525,0.823684239564244,5.75072826109418,0,1.24815069245824,0.505157755894224,0.717589654087649,0,0.554259570499814,0.947457058852424,1.30371981153621,1.18821560042632,1.40814148973101,1.00503754465089,0.714130922658041,0.975668239288994,0.945810864637146,0.664394068946325,0.797273843287435,0.327726629431476,0.345369963731791,1.15719246865209,0,0,0,0,2.40825884981688,3.7507739709505,0.163934945376675,0,2.52406575533005,3.51394869866975,2.36965737506079,2.15071918157297,1.55959071857676,1.98153571552183,1.61924280669958,4.09158201075837,3.55759000151871,1.92792789853084,0.709700426041343,0.890328018336276,1.46598263418218,0.824850614862677,0,1.21390318077491,0.604647113929502,1.13163047853539,1.77181135728464,1.22974059177571,1.55056975900933,1.09060118843252,1.06949213515416,0.948110273807448,0,0,4.42571487479924,1.98067203434441,0.776152102696527,2.35770738534752,3.01478397191865,2.85390108163313,3.9491764944509,0.304464949114599,0,0.42366414172764,0,0.49465875882444,1.13025098687134,0.965006798850494,0.238744688006273,0.492422699235184,0.582961673259701,2.96680483216816,0.170870880797853,1.23832120777933,0.370389054739423,0,0.136694227721025,0.228778173206523,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,1.73984796469624,2.03319467126849,0.432021363287205,0.836353184057875,0.436725127492355,0.404593039154462,1.23980183588004,0,0.518459893167171,0,0,0.747582730219894,1.32366792365678,1.55560950675238,0.645799117388655,0.506868376472335,0.821500670520278,1.17183946359555,1.99232754408851,1.20792060413003,0.288030006257865,0,1.01362607645082,0.718976700153791,0.649604114888975,0,0.39736270956253,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0,0.194915761479505,0,0.233753804363138,0,1.33191572024439,0.448569283047378,0.335769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0,0.501572104035363,1.6942555278512,3.68260189205742,2.86447756719698,5.499301834998,4.11049511862385,1.5107877947794,3.37511250115903,0.900642406448441,3.17199686288943,2.5888015587591,1.03787347584177,5.98537310101547,2.90247129782028,1.94485373654635,1.04806581313991,1.2869045591501,2.22246727801615,2.26638562962784,1.28367683836726,1.0107888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| |||
|short_description=p2@Xkr6 | |||
}} |
Latest revision as of 06:11, 26 September 2015
Short description: | p2@Xkr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Xkr6_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 0bp_to_ENSMUST00000119973_5end |
EntrezGene: | Xkr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.13e-16 | 33 |
neuronal stem cell | 2.13e-16 | 33 |
neuroblast | 2.13e-16 | 33 |
electrically signaling cell | 2.13e-16 | 33 |
CNS neuron (sensu Vertebrata) | 6.87e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.87e-13 | 23 |
electrically responsive cell | 1.26e-11 | 39 |
electrically active cell | 1.26e-11 | 39 |
ectodermal cell | 8.60e-10 | 44 |
neurectodermal cell | 8.60e-10 | 44 |
neural cell | 2.69e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.49e-24 | 64 |
neural plate | 2.49e-24 | 64 |
presumptive neural plate | 2.49e-24 | 64 |
central nervous system | 7.42e-24 | 73 |
ectoderm-derived structure | 1.31e-22 | 95 |
ectoderm | 1.31e-22 | 95 |
presumptive ectoderm | 1.31e-22 | 95 |
nervous system | 1.86e-22 | 75 |
ecto-epithelium | 4.98e-21 | 73 |
regional part of nervous system | 1.48e-19 | 54 |
neural tube | 6.16e-19 | 52 |
neural rod | 6.16e-19 | 52 |
future spinal cord | 6.16e-19 | 52 |
neural keel | 6.16e-19 | 52 |
structure with developmental contribution from neural crest | 1.91e-18 | 92 |
pre-chordal neural plate | 3.21e-17 | 49 |
brain | 6.19e-15 | 47 |
future brain | 6.19e-15 | 47 |
regional part of brain | 1.06e-14 | 46 |
gray matter | 4.47e-14 | 34 |
anterior neural tube | 1.21e-13 | 40 |
regional part of forebrain | 5.12e-13 | 39 |
forebrain | 5.12e-13 | 39 |
future forebrain | 5.12e-13 | 39 |
brain grey matter | 1.86e-10 | 29 |
regional part of telencephalon | 1.86e-10 | 29 |
telencephalon | 1.86e-10 | 29 |
basal ganglion | 9.86e-07 | 8 |
nuclear complex of neuraxis | 9.86e-07 | 8 |
aggregate regional part of brain | 9.86e-07 | 8 |
collection of basal ganglia | 9.86e-07 | 8 |
cerebral subcortex | 9.86e-07 | 8 |