FFCP PHASE1:Mm9::chr15:80403112..80403122,+: Difference between revisions
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{{FFCP|EntrezGene=17444|HGNC=|MCL_coexpression_id=68|UniProt=Q3U0E8|association_with_transcript=88bp_to_uc007wvo.1,uc007wvp.1_5end|description=CAGE_peak_12_at_Grap2_5end|id=chr15:80403112..80403122,+|ontology_enrichment_celltype=CL:0000838!2.03e-30!12;CL:0000542!6.01e-28!13;CL:0000051!6.01e-28!13;CL:0000084!2.28e-27!11;CL:0000827!2.28e-27!11;CL:0000791!7.62e-27!9;CL:0000789!7.62e-27!9;CL:0002420!7.62e-27!9;CL:0002419!7.62e-27!9;CL:0000790!7.62e-27!9;CL:0000624!2.15e-23!8;CL:0000893!2.37e-23!6;CL:0002489!2.37e-23!6;CL:0000898!2.37e-23!6;CL:0000809!2.37e-23!6;CL:0000810!2.37e-23!6;CL:0000895!2.37e-23!6;CL:0000808!2.37e-23!6;CL:0000894!2.37e-23!6;CL:0000806!2.37e-23!6;CL:0000807!2.37e-23!6;CL:0000805!2.37e-23!6;CL:0002425!2.37e-23!6;CL:0002436!2.37e-23!6;CL:0002427!2.37e-23!6;CL:0002428!2.37e-23!6;CL:0002429!2.37e-23!6;CL:0002433!2.37e-23!6;CL:0002431!2.37e-23!6;CL:0002432!2.37e-23!6;CL:0000738!5.82e-21!17;CL:0002087!5.82e-21!17;CL:0002031!1.40e-19!25;CL:0000988!8.36e-15!32;CL:0002032!8.36e-15!32;CL:0000037!8.36e-15!32;CL:0000566!8.36e-15!32;CL:0000837!8.36e-15!32;CL:0002320!1.30e-09!46;CL:0000134!1.30e-09!46;CL:0000219!7.43e-08!54|ontology_enrichment_celltype_v019_2=CL:0000893,2.48e-72,6;CL:0002489,2.48e-72,6;CL:0000898,2.48e-72,6;CL:0000809,2.48e-72,6;CL:0000810,2.48e-72,6;CL:0000895,2.48e-72,6;CL:0000808,2.48e-72,6;CL:0000894,2.48e-72,6;CL:0000806,2.48e-72,6;CL:0000807,2.48e-72,6;CL:0000805,2.48e-72,6;CL:0002425,2.48e-72,6;CL:0002436,2.48e-72,6;CL:0002427,2.48e-72,6;CL:0002428,2.48e-72,6;CL:0002429,2.48e-72,6;CL:0002433,2.48e-72,6;CL:0002431,2.48e-72,6;CL:0002432,2.48e-72,6;CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.45e-29!29;UBERON:0002370!5.36e-29!23;UBERON:0000974!5.36e-29!23;UBERON:0004807!5.36e-29!23;UBERON:0005058!5.36e-29!23;UBERON:0003351!5.36e-29!23;UBERON:0009113!5.36e-29!23;UBERON:0003295!5.36e-29!23;UBERON:0009722!5.36e-29!23;UBERON:0005562!5.36e-29!23;UBERON:0007690!5.36e-29!23;UBERON:0006562!1.11e-27!24;UBERON:0003408!1.11e-27!24;UBERON:0001557!1.11e-27!24;UBERON:0001042!1.11e-27!24;UBERON:0008814!1.11e-27!24;UBERON:0009145!1.11e-27!24;UBERON:0000072!2.61e-24!27;UBERON:0002193!6.11e-24!48;UBERON:0002390!7.00e-23!45;UBERON:0003061!7.00e-23!45;UBERON:0000063!3.82e-18!35;UBERON:0000065!2.16e-17!41;UBERON:0001004!6.56e-17!42;UBERON:0005057!2.27e-15!51;UBERON:0002405!2.62e-15!70;UBERON:0003081!1.92e-11!88;UBERON:0003929!1.43e-10!55;UBERON:0002384!1.30e-09!46;UBERON:0002368!1.82e-09!60;UBERON:0005911!3.66e-09!69;UBERON:0002530!1.57e-08!65;UBERON:0000490!2.32e-08!66;UBERON:0001041!3.11e-08!92;UBERON:0000077!1.22e-07!97;UBERON:0000064!1.78e-07!99;UBERON:0000949!1.92e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.83025338797167,2.57470978954193,1.54096171402954,2.47293692885543,0.856003649656029,1.22388563386596,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0.240390899039938,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Grap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17444 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U0E8 | |||
|association_with_transcript=88bp_to_uc007wvo.1,uc007wvp.1_5end | |||
|cluster_id=chr15:80403112..80403122,+ | |||
|description=CAGE_peak_12_at_Grap2_5end | |||
|id=chr15:80403112..80403122,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.03e-30!12;CL:0000542!6.01e-28!13;CL:0000051!6.01e-28!13;CL:0000084!2.28e-27!11;CL:0000827!2.28e-27!11;CL:0000791!7.62e-27!9;CL:0000789!7.62e-27!9;CL:0002420!7.62e-27!9;CL:0002419!7.62e-27!9;CL:0000790!7.62e-27!9;CL:0000624!2.15e-23!8;CL:0000893!2.37e-23!6;CL:0002489!2.37e-23!6;CL:0000898!2.37e-23!6;CL:0000809!2.37e-23!6;CL:0000810!2.37e-23!6;CL:0000895!2.37e-23!6;CL:0000808!2.37e-23!6;CL:0000894!2.37e-23!6;CL:0000806!2.37e-23!6;CL:0000807!2.37e-23!6;CL:0000805!2.37e-23!6;CL:0002425!2.37e-23!6;CL:0002436!2.37e-23!6;CL:0002427!2.37e-23!6;CL:0002428!2.37e-23!6;CL:0002429!2.37e-23!6;CL:0002433!2.37e-23!6;CL:0002431!2.37e-23!6;CL:0002432!2.37e-23!6;CL:0000738!5.82e-21!17;CL:0002087!5.82e-21!17;CL:0002031!1.40e-19!25;CL:0000988!8.36e-15!32;CL:0002032!8.36e-15!32;CL:0000037!8.36e-15!32;CL:0000566!8.36e-15!32;CL:0000837!8.36e-15!32;CL:0002320!1.30e-09!46;CL:0000134!1.30e-09!46;CL:0000219!7.43e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.48e-72,6;CL:0002489,2.48e-72,6;CL:0000898,2.48e-72,6;CL:0000809,2.48e-72,6;CL:0000810,2.48e-72,6;CL:0000895,2.48e-72,6;CL:0000808,2.48e-72,6;CL:0000894,2.48e-72,6;CL:0000806,2.48e-72,6;CL:0000807,2.48e-72,6;CL:0000805,2.48e-72,6;CL:0002425,2.48e-72,6;CL:0002436,2.48e-72,6;CL:0002427,2.48e-72,6;CL:0002428,2.48e-72,6;CL:0002429,2.48e-72,6;CL:0002433,2.48e-72,6;CL:0002431,2.48e-72,6;CL:0002432,2.48e-72,6;CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.45e-29!29;UBERON:0002370!5.36e-29!23;UBERON:0000974!5.36e-29!23;UBERON:0004807!5.36e-29!23;UBERON:0005058!5.36e-29!23;UBERON:0003351!5.36e-29!23;UBERON:0009113!5.36e-29!23;UBERON:0003295!5.36e-29!23;UBERON:0009722!5.36e-29!23;UBERON:0005562!5.36e-29!23;UBERON:0007690!5.36e-29!23;UBERON:0006562!1.11e-27!24;UBERON:0003408!1.11e-27!24;UBERON:0001557!1.11e-27!24;UBERON:0001042!1.11e-27!24;UBERON:0008814!1.11e-27!24;UBERON:0009145!1.11e-27!24;UBERON:0000072!2.61e-24!27;UBERON:0002193!6.11e-24!48;UBERON:0002390!7.00e-23!45;UBERON:0003061!7.00e-23!45;UBERON:0000063!3.82e-18!35;UBERON:0000065!2.16e-17!41;UBERON:0001004!6.56e-17!42;UBERON:0005057!2.27e-15!51;UBERON:0002405!2.62e-15!70;UBERON:0003081!1.92e-11!88;UBERON:0003929!1.43e-10!55;UBERON:0002384!1.30e-09!46;UBERON:0002368!1.82e-09!60;UBERON:0005911!3.66e-09!69;UBERON:0002530!1.57e-08!65;UBERON:0000490!2.32e-08!66;UBERON:0001041!3.11e-08!92;UBERON:0000077!1.22e-07!97;UBERON:0000064!1.78e-07!99;UBERON:0000949!1.92e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,1.83025338797167,2.57470978954193,1.54096171402954,2.47293692885543,0.856003649656029,1.22388563386596,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0.240390899039938,0,0.201932899896295,0.228620419965,0.302478555410522,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Grap2 | |||
}} |
Latest revision as of 03:46, 27 September 2015
Short description: | p12@Grap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Grap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 88bp_to_uc007wvo.1, uc007wvp.1_5end |
EntrezGene: | Grap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.61e-19 | 23 |
neck | 1.61e-19 | 23 |
respiratory system epithelium | 1.61e-19 | 23 |
hemolymphoid system gland | 1.61e-19 | 23 |
pharyngeal epithelium | 1.61e-19 | 23 |
thymic region | 1.61e-19 | 23 |
pharyngeal gland | 1.61e-19 | 23 |
entire pharyngeal arch endoderm | 1.61e-19 | 23 |
thymus primordium | 1.61e-19 | 23 |
early pharyngeal endoderm | 1.61e-19 | 23 |
pharynx | 9.72e-19 | 24 |
gland of gut | 9.72e-19 | 24 |
upper respiratory tract | 9.72e-19 | 24 |
chordate pharynx | 9.72e-19 | 24 |
pharyngeal arch system | 9.72e-19 | 24 |
pharyngeal region of foregut | 9.72e-19 | 24 |
segment of respiratory tract | 9.73e-17 | 27 |
hemopoietic organ | 1.24e-15 | 29 |
immune organ | 1.24e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 4.53e-13 | 35 |
craniocervical region | 1.00e-12 | 36 |
respiratory tract | 2.99e-11 | 41 |
respiratory system | 5.35e-11 | 42 |
anterior region of body | 9.33e-11 | 43 |
hematopoietic system | 2.64e-10 | 45 |
blood island | 2.64e-10 | 45 |
connective tissue | 4.29e-10 | 46 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
gut epithelium | 1.55e-08 | 55 |
endocrine gland | 7.20e-08 | 60 |
gland | 2.65e-07 | 65 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |