FFCP PHASE1:Mm9::chr16:10545521..10545547,+: Difference between revisions
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{{FFCP|EntrezGene=74374|HGNC=|UniProt=Q80U30,D3YVA1|association_with_transcript=19bp_to_ENSMUST00000038145,ENSMUST00000115828,ENSMUST00000150894_5end|description=CAGE_peak_3_at_Clec16a_5end|id=chr16:10545521..10545547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.18e-11!94;UBERON:0007811!2.97e-10!86;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000483!1.75e-09!181;UBERON:0001017!2.26e-09!73;UBERON:0005743!2.26e-09!73;UBERON:0000955!3.69e-09!50;UBERON:0006238!3.69e-09!50;UBERON:0002616!1.14e-08!49;UBERON:0000119!1.33e-08!183;UBERON:0000033!1.63e-08!63;UBERON:0000073!1.89e-08!75;UBERON:0001016!1.89e-08!75;UBERON:0002346!4.19e-08!71;UBERON:0003075!4.19e-08!71;UBERON:0007284!4.19e-08!71;UBERON:0004121!4.47e-08!102;UBERON:0000924!4.47e-08!102;UBERON:0006601!4.47e-08!102;UBERON:0000025!1.16e-07!114;UBERON:0004111!3.61e-07!122;UBERON:0002020!3.76e-07!34;UBERON:0000477!5.23e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-11,54;UBERON:0000483,1.49e-10,174;UBERON:0010314,1.65e-10,92;UBERON:0010371,1.82e-10,73;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,7.62e-10,52;UBERON:0005068,7.62e-10,52;UBERON:0006241,7.62e-10,52;UBERON:0007135,7.62e-10,52;UBERON:0000119,1.31e-09,176;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0001017,2.26e-09,73;UBERON:0001016,1.89e-08,75;UBERON:0000955,8.26e-08,47;UBERON:0006238,8.26e-08,47;UBERON:0000025,1.17e-07,114;UBERON:0002616,2.41e-07,46;UBERON:0004111,3.62e-07,122;UBERON:0002020,3.76e-07,34|phase1_expression=4.48416771893423,11.5161884520989,11.3749809847384,9.67885476181856,13.023288978605,7.89032577985882,7.47560449905682,2.7115897922731,16.6130692138967,20.5976783163354,5.99262888789267,7.73789942254763,3.76641605848653,3.84649770643589,0,2.22722794128809,2.09868563438444,3.94327706697797,6.7186072466812,5.94145512517242,7.22867966284093,3.57447424323187,4.96279599363977,3.51983330145495,3.89995777814189,5.16808767703518,5.59990595006797,8.18790684206378,1.90023419456374,3.78045194639896,3.32595765982957,5.08024538767705,5.53558308826113,0,3.17736781726402,2.32728503501889,4.28755648150975,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,0.971020706062307,3.52511090331616,4.8660926985367,7.52541683862894,1.56478268869608,4.57852828398938,5.05278220289285,5.63846707315422,2.79972843250725,4.31257693094915,5.03347818173209,7.97898356212479,7.39406358113421,0.257259436035947,1.71920063963254,2.06268836910977,10.5204559646991,5.28990979272033,12.0427966666174,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,5.39280198933128,4.61061966385865,4.66603255388149,4.45519596494579,3.78584930432488,14.568200204594,8.61387309711293,4.28717797252339,4.31304619582064,7.35375029288017,12.1127469099328,13.5348578370299,14.8998337258556,12.0016521834476,9.24025200384338,11.4600941522487,13.1216009530649,6.19038871034848,9.16789486660861,12.9636577608414,10.8202477407318,13.4207600994216,3.40767869999328,2.11600368298999,5.50742528533188,2.58127163094416,9.51959867190851,4.85732872474035,7.79731700937203,8.06448396775204,5.47733238513832,1.70430322578058,1.29893002301434,0.70667914902068,3.52108549441701,3.84979432242953,7.64415719119937,0,2.16491041011214,3.04031838570118,3.0331466700887,4.45317130904334,9.06282592765101,4.89859058913922,3.29622120855658,5.78484408793068,3.45923245884088,3.46662073271032,5.17390311397101,3.64433114856059,4.6967043869531,8.53136205827479,4.42305275974937,7.60304194752823,3.75430581382669,6.78825354389311,1.86391761218122,14.3462590535658,19.4785437336513,4.59822699375465,1.67741174308288,0.599902730993408,2.92261522268049,21.7196427136993,10.5225138648284,5.52879149296603,16.8609590586508,15.5986428971502,18.7009240103604,14.7639549391659,4.88828946481518,6.34475550111474,6.57079171927554,4.62972082950243,4.03373373184381,2.5289231487682,6.30217454318722,5.42537344208574,7.75616090325138,8.83984669965463,7.68354141389776,11.9003550539947,4.74249584452253,6.05139456537022,6.33424046990216,4.82230611340665,5.56094498451196,6.96504333044333,8.0255033199098,2.38841120182192,2.80885274925294,2.05878325691772,0,6.42089894860056,6.0976775595085,7.20248245844059,6.39210786080068,6.68998387941173,9.10175966035532,9.53389173476672,8.31647544338819,9.45799273174073,13.1647879930784,16.9092488001468,19.132239052822,18.1287984407412,16.4662586468288,14.8969124824013,7.78072809687271,4.52780294468852,8.26046957459495,7.1401652999157,3.41261200856374,3.0190767341857,3.60828891701861,3.83198696784351,4.44756087689741,4.56541502670142,4.74529061544512,3.62337700392824,2.5133520880027,3.78017296878187,3.8992817423824,4.49409704327111,2.16138049874694,2.98711909881551,3.79335801906163,3.99869794134051,1.1270773567308,6.31319116320474,6.5943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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74374 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q80U30,D3YVA1 | |||
|association_with_transcript=19bp_to_ENSMUST00000038145,ENSMUST00000115828,ENSMUST00000150894_5end | |||
|cluster_id=chr16:10545521..10545547,+ | |||
|description=CAGE_peak_3_at_Clec16a_5end | |||
|id=chr16:10545521..10545547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.18e-11!94;UBERON:0007811!2.97e-10!86;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000483!1.75e-09!181;UBERON:0001017!2.26e-09!73;UBERON:0005743!2.26e-09!73;UBERON:0000955!3.69e-09!50;UBERON:0006238!3.69e-09!50;UBERON:0002616!1.14e-08!49;UBERON:0000119!1.33e-08!183;UBERON:0000033!1.63e-08!63;UBERON:0000073!1.89e-08!75;UBERON:0001016!1.89e-08!75;UBERON:0002346!4.19e-08!71;UBERON:0003075!4.19e-08!71;UBERON:0007284!4.19e-08!71;UBERON:0004121!4.47e-08!102;UBERON:0000924!4.47e-08!102;UBERON:0006601!4.47e-08!102;UBERON:0000025!1.16e-07!114;UBERON:0004111!3.61e-07!122;UBERON:0002020!3.76e-07!34;UBERON:0000477!5.23e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-11,54;UBERON:0000483,1.49e-10,174;UBERON:0010314,1.65e-10,92;UBERON:0010371,1.82e-10,73;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,7.62e-10,52;UBERON:0005068,7.62e-10,52;UBERON:0006241,7.62e-10,52;UBERON:0007135,7.62e-10,52;UBERON:0000119,1.31e-09,176;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0001017,2.26e-09,73;UBERON:0001016,1.89e-08,75;UBERON:0000955,8.26e-08,47;UBERON:0006238,8.26e-08,47;UBERON:0000025,1.17e-07,114;UBERON:0002616,2.41e-07,46;UBERON:0004111,3.62e-07,122;UBERON:0002020,3.76e-07,34 | |||
|phase1_expression=4.48416771893423,11.5161884520989,11.3749809847384,9.67885476181856,13.023288978605,7.89032577985882,7.47560449905682,2.7115897922731,16.6130692138967,20.5976783163354,5.99262888789267,7.73789942254763,3.76641605848653,3.84649770643589,0,2.22722794128809,2.09868563438444,3.94327706697797,6.7186072466812,5.94145512517242,7.22867966284093,3.57447424323187,4.96279599363977,3.51983330145495,3.89995777814189,5.16808767703518,5.59990595006797,8.18790684206378,1.90023419456374,3.78045194639896,3.32595765982957,5.08024538767705,5.53558308826113,0,3.17736781726402,2.32728503501889,4.28755648150975,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,0.971020706062307,3.52511090331616,4.8660926985367,7.52541683862894,1.56478268869608,4.57852828398938,5.05278220289285,5.63846707315422,2.79972843250725,4.31257693094915,5.03347818173209,7.97898356212479,7.39406358113421,0.257259436035947,1.71920063963254,2.06268836910977,10.5204559646991,5.28990979272033,12.0427966666174,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,5.39280198933128,4.61061966385865,4.66603255388149,4.45519596494579,3.78584930432488,14.568200204594,8.61387309711293,4.28717797252339,4.31304619582064,7.35375029288017,12.1127469099328,13.5348578370299,14.8998337258556,12.0016521834476,9.24025200384338,11.4600941522487,13.1216009530649,6.19038871034848,9.16789486660861,12.9636577608414,10.8202477407318,13.4207600994216,3.40767869999328,2.11600368298999,5.50742528533188,2.58127163094416,9.51959867190851,4.85732872474035,7.79731700937203,8.06448396775204,5.47733238513832,1.70430322578058,1.29893002301434,0.70667914902068,3.52108549441701,3.84979432242953,7.64415719119937,0,2.16491041011214,3.04031838570118,3.0331466700887,4.45317130904334,9.06282592765101,4.89859058913922,3.29622120855658,5.78484408793068,3.45923245884088,3.46662073271032,5.17390311397101,3.64433114856059,4.6967043869531,8.53136205827479,4.42305275974937,7.60304194752823,3.75430581382669,6.78825354389311,1.86391761218122,14.3462590535658,19.4785437336513,4.59822699375465,1.67741174308288,0.599902730993408,2.92261522268049,21.7196427136993,10.5225138648284,5.52879149296603,16.8609590586508,15.5986428971502,18.7009240103604,14.7639549391659,4.88828946481518,6.34475550111474,6.57079171927554,4.62972082950243,4.03373373184381,2.5289231487682,6.30217454318722,5.42537344208574,7.75616090325138,8.83984669965463,7.68354141389776,11.9003550539947,4.74249584452253,6.05139456537022,6.33424046990216,4.82230611340665,5.56094498451196,6.96504333044333,8.0255033199098,2.38841120182192,2.80885274925294,2.05878325691772,0,6.42089894860056,6.0976775595085,7.20248245844059,6.39210786080068,6.68998387941173,9.10175966035532,9.53389173476672,8.31647544338819,9.45799273174073,13.1647879930784,16.9092488001468,19.132239052822,18.1287984407412,16.4662586468288,14.8969124824013,7.78072809687271,4.52780294468852,8.26046957459495,7.1401652999157,3.41261200856374,3.0190767341857,3.60828891701861,3.83198696784351,4.44756087689741,4.56541502670142,4.74529061544512,3.62337700392824,2.5133520880027,3.78017296878187,3.8992817423824,4.49409704327111,2.16138049874694,2.98711909881551,3.79335801906163,3.99869794134051,1.1270773567308,6.31319116320474,6.59438456369928,7.78507600782536,9.80166325425988,9.88987991463334,8.47793130343424,7.28043267138623,16.008441862706,2.16898637430922,3.73462090715086,2.24862112384854,3.24576194221605,2.894125917029,4.32863948028414,4.31544206176216,2.59416362840057,4.3929826110093,5.75072826109418,3.34926852901653,8.42501717409313,7.57736633841335,7.53469136792031,9.64887042726734,8.31389355749721,3.41084541186873,1.95557971730431,3.39490171550376,2.81628297946203,3.1826188913945,3.33261097240419,7.80534591431195,5.2019597555043,5.97954662051692,5.74037167166954,4.42430949732493,4.14443956478149,7.37710198765709,0,3.26343410291226,2.45882136509518,3.86311444826625,19.7477225684984,19.2227166011213,4.59017847054691,23.2273253028023,6.62567260774139,6.63745865304285,6.67812532971677,2.38968797952552,3.11918143715352,4.52922449262132,4.85772842009873,4.38383786866968,4.74345333535828,15.7447445046685,4.5420827266646,3.20518086601059,4.0721739838394,3.29940245945071,2.65490276679926,2.18502572539483,0.906970670894253,3.20628635585027,2.06711325016541,1.53717573971964,4.13485269069154,3.99887102425256,4.27796854061666,4.74055136903724,4.21674434299995,4.12542172992747,4.76615448055303,4.32146625675145,4.2688365648309,4.07240366560025,8.15765074754458,7.49149033928696,6.91105886528908,9.43841342255258,2.58138878870081,4.66030555900404,6.61585194164886,13.3557864882599,14.6932628293274,10.434136012571,13.0115854963419,10.669158483429,2.91480836629851,16.5028518789354,1.87957968877638,2.68302928352189,2.03713980106683,2.26042148405629,2.46049609897845,1.83022538565218,2.88963330989554,5.17820373597535,4.42239916174156,4.77335309007557,4.11236791655476,4.06638934253697,3.24016022465404,3.76358932826044,4.36725127492355,4.45052343069908,6.36431609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| |||
|short_description=p3@Clec16a | |||
}} |
Latest revision as of 14:37, 1 October 2015
Short description: | p3@Clec16a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clec16a_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000038145, ENSMUST00000115828, ENSMUST00000150894_5end |
EntrezGene: | Clec16a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.34e-11 | 54 |
epithelium | 1.49e-10 | 174 |
structure with developmental contribution from neural crest | 1.65e-10 | 92 |
ecto-epithelium | 1.82e-10 | 73 |
neurectoderm | 6.12e-10 | 64 |
neural plate | 6.12e-10 | 64 |
presumptive neural plate | 6.12e-10 | 64 |
neural tube | 7.62e-10 | 52 |
neural rod | 7.62e-10 | 52 |
future spinal cord | 7.62e-10 | 52 |
neural keel | 7.62e-10 | 52 |
cell layer | 1.31e-09 | 176 |
ectoderm-derived structure | 1.81e-09 | 95 |
ectoderm | 1.81e-09 | 95 |
presumptive ectoderm | 1.81e-09 | 95 |
central nervous system | 2.26e-09 | 73 |
nervous system | 1.89e-08 | 75 |
brain | 8.26e-08 | 47 |
future brain | 8.26e-08 | 47 |
tube | 1.17e-07 | 114 |
regional part of brain | 2.41e-07 | 46 |
anatomical conduit | 3.62e-07 | 122 |
gray matter | 3.76e-07 | 34 |