FFCP PHASE1:Hg19::chr5:112043148..112043155,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=583 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFL6 | |||
|association_with_transcript=-39bp_to_ENST00000509732_5end | |||
|cluster_id=chr5:112043148..112043155,+ | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_14_at_APC_5end | |||
|id=chr5:112043148..112043155,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3!UBERON:0006601;6.24e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.73e-35!57;UBERON:0005068!7.73e-35!57;UBERON:0006241!7.73e-35!57;UBERON:0007135!7.73e-35!57;UBERON:0002616!6.66e-31!59;UBERON:0000955!1.72e-30!69;UBERON:0006238!1.72e-30!69;UBERON:0001017!1.84e-29!82;UBERON:0005743!3.81e-29!86;UBERON:0000073!2.31e-28!94;UBERON:0001016!2.31e-28!94;UBERON:0003075!6.19e-26!86;UBERON:0007284!6.19e-26!86;UBERON:0007023!5.00e-25!115;UBERON:0002346!2.64e-24!90;UBERON:0002020!7.79e-24!34;UBERON:0003528!7.79e-24!34;UBERON:0001893!1.55e-23!34;UBERON:0001869!6.16e-23!32;UBERON:0002780!6.25e-23!41;UBERON:0001890!6.25e-23!41;UBERON:0006240!6.25e-23!41;UBERON:0003080!3.10e-22!42;UBERON:0002791!5.80e-22!33;UBERON:0002619!9.93e-20!22;UBERON:0000033!4.40e-19!123;UBERON:0000153!1.06e-18!129;UBERON:0007811!1.06e-18!129;UBERON:0003056!1.29e-17!61;UBERON:0000956!5.94e-17!25;UBERON:0000203!5.94e-17!25;UBERON:0001950!4.21e-16!20;UBERON:0004121!4.89e-16!169;UBERON:0000924!2.21e-15!173;UBERON:0006601!2.21e-15!173;UBERON:0003076!4.16e-14!15;UBERON:0003057!4.16e-14!15;UBERON:0004733!1.26e-11!12;UBERON:0002028!1.26e-11!12;UBERON:0007277!1.26e-11!12;UBERON:0004732!1.33e-10!13;UBERON:0002680!2.66e-09!9;UBERON:0001895!2.66e-09!9;UBERON:0010092!2.66e-09!9;UBERON:0000200!4.85e-09!6;UBERON:0000475!1.54e-08!365;UBERON:0002308!2.16e-08!9;UBERON:0000125!2.16e-08!9;UBERON:0002021!3.94e-08!5;UBERON:0000349!4.71e-08!5;UBERON:0000988!5.18e-08!3;UBERON:0000025!1.05e-07!194;UBERON:0002771!2.26e-07!3;UBERON:0002298!3.08e-07!8;UBERON:0000483!3.62e-07!309;UBERON:0000064!3.91e-07!219;UBERON:0001871!4.06e-07!7;UBERON:0000119!5.57e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;6.41e-23;9!UBERON:0001895;6.41e-23;9!UBERON:0000988;9.45e-18;3!UBERON:0004733;1.71e-17;12!UBERON:0002028;1.71e-17;12!UBERON:0004732;3.07e-16;13!UBERON:0002021;3.26e-11;5!UBERON:0002037;1.44e-09;6!UBERON:0002298;1.44e-09;6!UBERON:0000955;3.80e-08;68!UBERON:0001016;2.45e-07;83!UBERON:0001017;2.59e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,6.41e-23,9;UBERON:0001895,6.41e-23,9;UBERON:0010092,6.41e-23,9;UBERON:0000988,1.12e-17,3;UBERON:0004733,1.71e-17,12;UBERON:0002028,1.71e-17,12;UBERON:0007277,1.71e-17,12;UBERON:0004732,3.07e-16,13;UBERON:0003076,3.15e-14,15;UBERON:0003057,3.15e-14,15;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002021,3.26e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0002298,1.57e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.221158519862449,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0.51595809741485,0.0967563312890851,0,0,0,0,0,0,0,0.569797163602908,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0.41023272848151,0.252071696221718,0.484100767249525,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,0,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,1.35939465953663,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.407948941145488,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0.829169439458779,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@APC | |||
}} |
Latest revision as of 18:02, 19 September 2015
Short description: | p14@APC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_APC_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | -39bp_to_ENST00000509732_5end |
EntrezGene: | APC |
HGNC: | 583 |
UniProt: | D6RFL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 6.41e-23 | 9 |
metencephalon | 6.41e-23 | 9 |
future metencephalon | 6.41e-23 | 9 |
pons | 1.12e-17 | 3 |
segmental subdivision of hindbrain | 1.71e-17 | 12 |
hindbrain | 1.71e-17 | 12 |
presumptive hindbrain | 1.71e-17 | 12 |
segmental subdivision of nervous system | 3.07e-16 | 13 |
posterior neural tube | 3.15e-14 | 15 |
chordal neural plate | 3.15e-14 | 15 |
brain | 3.68e-12 | 68 |
future brain | 3.68e-12 | 68 |
occipital lobe | 3.26e-11 | 5 |
central nervous system | 2.17e-10 | 81 |
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
brainstem | 1.57e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |