FFCP PHASE1:Hg19::chr5:112539005..112539020,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4163 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6935 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506605_5end | |||
|cluster_id=chr5:112539005..112539020,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_4_at_MCC_5end | |||
|id=chr5:112539005..112539020,- | |||
|ontology_enrichment_celltype=CL:0000148!3.60e-15!10;CL:0000541!3.60e-15!10;CL:0000147!7.69e-12!14;CL:0000333!1.31e-11!41;CL:0000133!1.83e-08!59;CL:0000221!7.00e-08!71;CL:0000710!3.60e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.15e-35;10!CL:0000147;3.85e-25;14!CL:0002567;2.66e-18;3!CL:0000710;3.10e-17;20!CL:0000075;1.89e-12;27!CL:0002077;6.84e-09;34!CL:0002605;3.90e-08;3!CL:0000243;4.18e-08;15!CL:0000125;4.18e-08;15!CL:0000039;1.42e-07;7!CL:0000586;1.42e-07;7!CL:0000128;1.76e-07;7!CL:0000126;1.76e-07;7!CL:0000127;1.76e-07;7!CL:0000095;3.18e-07;17!CL:0002566;4.01e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.13e-35,10;CL:0000541,1.13e-35,10;CL:0000147,3.80e-25,14;CL:0000333,5.06e-23,41;CL:0002567,2.75e-18,3;CL:0000710,3.07e-17,20;CL:0000133,2.33e-15,59;CL:0000075,1.88e-12,27;CL:0000221,3.77e-12,72;CL:0002077,1.23e-09,34;CL:0000243,4.09e-08,15;CL:0000125,4.09e-08,15;CL:0000030,4.09e-08,15;CL:0000339,4.09e-08,15;CL:0002605,4.20e-08,3;CL:0000039,1.32e-07,7;CL:0000586,1.32e-07,7;CL:0000128,1.70e-07,7;CL:0000126,1.70e-07,7;CL:0000127,1.70e-07,7;CL:0002453,1.70e-07,7;CL:0000095,3.12e-07,17;CL:0000123,3.12e-07,17;CL:0002566,4.25e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000133;5.18e-10;59!UBERON:0003056;9.24e-09;3!CL:0000339;4.18e-08;15!UBERON:0004140;4.01e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.46e-10!115;UBERON:0000033!9.20e-10!123;UBERON:0005743!1.21e-09!86;UBERON:0000153!1.91e-09!129;UBERON:0007811!1.91e-09!129;UBERON:0000073!2.17e-09!94;UBERON:0001016!2.17e-09!94;UBERON:0001017!6.37e-09!82;UBERON:0000924!7.51e-09!173;UBERON:0006601!7.51e-09!173;UBERON:0003075!7.76e-09!86;UBERON:0007284!7.76e-09!86;UBERON:0004121!8.28e-09!169;UBERON:0002346!8.99e-09!90;UBERON:0000955!3.92e-08!69;UBERON:0006238!3.92e-08!69;UBERON:0001049!1.11e-07!57;UBERON:0005068!1.11e-07!57;UBERON:0006241!1.11e-07!57;UBERON:0007135!1.11e-07!57;UBERON:0002616!3.96e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.94e-13;2!UBERON:0002757;4.94e-13;2!UBERON:0010134;4.94e-13;2!UBERON:0005408;4.94e-13;2!UBERON:0001899;4.94e-13;2!UBERON:0003296;6.39e-07;4!UBERON:0010133;6.39e-07;4!UBERON:0002784;6.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.94e-13,2;UBERON:0002757,4.94e-13,2;UBERON:0010134,4.94e-13,2;UBERON:0005408,4.94e-13,2;UBERON:0001899,4.94e-13,2;UBERON:0003296,6.39e-07,4;UBERON:0010133,6.39e-07,4;UBERON:0002784,6.39e-07,4;UBERON:0005418,7.15e-07,1;UBERON:0001389,7.15e-07,1;UBERON:0000026,7.15e-07,1;UBERON:0008784,7.15e-07,1;UBERON:0006058,7.15e-07,1;UBERON:0003663,7.15e-07,1;UBERON:0004256,7.15e-07,1;UBERON:0004708,7.15e-07,1;UBERON:0002101,7.15e-07,1;UBERON:0004709,7.15e-07,1;UBERON:0002529,7.15e-07,1;UBERON:0010538,7.15e-07,1;UBERON:0003661,7.15e-07,1;UBERON:0010890,7.15e-07,1;UBERON:0002471,7.15e-07,1;UBERON:0001383,7.15e-07,1;UBERON:0004357,7.15e-07,1;UBERON:0004347,7.15e-07,1;UBERON:0005420,7.15e-07,1;UBERON:0005732,7.15e-07,1;UBERON:0010758,7.15e-07,1;UBERON:0010707,7.15e-07,1;UBERON:0000978,7.15e-07,1;UBERON:0002103,7.15e-07,1;UBERON:0001665,7.15e-07,1;UBERON:0003823,7.15e-07,1;UBERON:0000154,7.15e-07,1;UBERON:0010709,7.15e-07,1;UBERON:0005733,7.15e-07,1;UBERON:0005730,7.15e-07,1;UBERON:0002146,9.51e-07,1;UBERON:0005623,9.51e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,1.72369481307503,0,0.940364164434263,1.71741592278634,1.09499540058307,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0.286804595389004,0.121973706129595,0.132529768321485,0.813357600086629,0.518305275076852,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.708875486211932,0,0,0,0,0.176096868026452,0,0,0,4.19086102328316,8.40374536228211,7.03304683260282,6.84289784090821,3.59896224461632,4.80548892550268,5.71652865261156,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.01289087829486,0.459257792658427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,1.0077309914171,0.920418142519393,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0.139423744278603,0.153900517007594,0,1.1528195219403,1.79515288819544,2.93347904189422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,2.70582154946087,1.7626992537532,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0.19871461170299,0,0,0.160317640503067,0,0.19980960958213,0,0,0.343189995723929,0,0,0,0,0,0,0.866851769704557,0.600420288709789,0.547621515567972,0,0,0,0.837847203816763,1.60412296808179,0,0,0,0.669514372325618,4.97157696401774,0,0,0.945398187686684,0.576911008668165,0.606631894687664,0,0,0,0.272406812223151,0.482259445395058,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,1.97216073266129,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,1.35974509824151,0.879313402068495,0,0.387848869084652,0,0.171086837884329,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.248385611765534,97.8124848999152,0,8.49235058233228,0.285465333544967,0,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.706756583783524,0,0,0,0,0,0,0.389720617678777,0,0.327130788511688,0,0.983091635014877,0,0,0,0,0,0,0,0,3.58104239650225,0,0,0.655257829152084,0.509197589862076,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0.588886311006154,0,0,0.462102664601353,0,0,0,0,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,37.4991285114801,48.4248559995106,0,0,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,3.21644448794954,38.713334874518,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.111855431797792,0.392600934460972,0,1.94228651156368,0,0,0,0,0,0,0,15.2817318276146,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0,0,0.357107877211315,1.05868461514708,0,0,0,0.573358332605805,0,0,0,0,0,0,0,0.378499274505237,0.655593431782173,3.29416102629736,0,0,0,0,0,0,0,0.20686599172379,0.852935927603924,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.215166616178029,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MCC | |||
}} |
Latest revision as of 18:42, 19 September 2015
Short description: | p4@MCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MCC_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 0bp_to_ENST00000506605_5end |
EntrezGene: | MCC |
HGNC: | 6935 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.13e-35 | 10 |
melanoblast | 1.13e-35 | 10 |
pigment cell | 3.80e-25 | 14 |
migratory neural crest cell | 5.06e-23 | 41 |
light melanocyte | 2.75e-18 | 3 |
neurecto-epithelial cell | 3.07e-17 | 20 |
neurectodermal cell | 2.33e-15 | 59 |
columnar/cuboidal epithelial cell | 1.88e-12 | 27 |
ectodermal cell | 3.77e-12 | 72 |
ecto-epithelial cell | 1.23e-09 | 34 |
glial cell (sensu Vertebrata) | 4.09e-08 | 15 |
glial cell | 4.09e-08 | 15 |
glioblast | 4.09e-08 | 15 |
glioblast (sensu Vertebrata) | 4.09e-08 | 15 |
astrocyte of the cerebral cortex | 4.20e-08 | 3 |
germ line cell | 1.32e-07 | 7 |
germ cell | 1.32e-07 | 7 |
oligodendrocyte | 1.70e-07 | 7 |
macroglial cell | 1.70e-07 | 7 |
astrocyte | 1.70e-07 | 7 |
oligodendrocyte precursor cell | 1.70e-07 | 7 |
neuron associated cell | 3.12e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.12e-07 | 17 |
dark melanocyte | 4.25e-07 | 1 |