FFCP PHASE1:Hg19::chr5:139487363..139487444,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5813 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9701 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000505703_5end | |||
|cluster_id=chr5:139487363..139487444,+ | |||
|coexpression_cluster_id=C1130 | |||
|description=CAGE_peak_1_at_PURA_5end | |||
|id=chr5:139487363..139487444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.80e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-45!115;UBERON:0001049!4.13e-21!57;UBERON:0005068!4.13e-21!57;UBERON:0006241!4.13e-21!57;UBERON:0007135!4.13e-21!57;UBERON:0002616!5.51e-19!59;UBERON:0003080!4.37e-17!42;UBERON:0002780!8.87e-17!41;UBERON:0001890!8.87e-17!41;UBERON:0006240!8.87e-17!41;UBERON:0000955!4.04e-16!69;UBERON:0006238!4.04e-16!69;UBERON:0003075!1.93e-13!86;UBERON:0007284!1.93e-13!86;UBERON:0002346!6.91e-13!90;UBERON:0001017!7.78e-13!82;UBERON:0002020!7.82e-13!34;UBERON:0003528!7.82e-13!34;UBERON:0001893!8.58e-13!34;UBERON:0002791!3.27e-12!33;UBERON:0005743!8.29e-12!86;UBERON:0000073!8.46e-12!94;UBERON:0001016!8.46e-12!94;UBERON:0001869!1.15e-11!32;UBERON:0002619!6.60e-10!22;UBERON:0000153!3.11e-09!129;UBERON:0007811!3.11e-09!129;UBERON:0000033!8.39e-09!123;UBERON:0001950!9.59e-09!20;UBERON:0003056!2.42e-08!61;UBERON:0000956!1.03e-07!25;UBERON:0000203!1.03e-07!25;UBERON:0002308!3.02e-07!9;UBERON:0000125!3.02e-07!9;UBERON:0002420!3.21e-07!9;UBERON:0007245!3.21e-07!9;UBERON:0010009!3.21e-07!9;UBERON:0010011!3.21e-07!9;UBERON:0000454!3.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.18e-13;114!UBERON:0002780;2.60e-12;41!UBERON:0001890;2.60e-12;41!UBERON:0000073;1.36e-11;53!UBERON:0002616;1.36e-11;53!UBERON:0001893;2.44e-11;34!UBERON:0003528;1.06e-10;34!UBERON:0002020;1.06e-10;34!UBERON:0002791;1.86e-10;32!UBERON:0001869;1.98e-10;32!UBERON:0002619;5.63e-10;22!UBERON:0001950;8.34e-09;20!UBERON:0001017;7.37e-08;75!UBERON:0000956;1.16e-07;25!UBERON:0000203;1.16e-07;25!UBERON:0000955;1.34e-07;68!UBERON:0000125;2.82e-07;9!UBERON:0002308;2.82e-07;9!UBERON:0002420;3.04e-07;9!UBERON:0007245;3.04e-07;9!UBERON:0010009;3.04e-07;9!UBERON:0010011;3.04e-07;9!UBERON:0000454;3.04e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.07e-44,114;UBERON:0001049,8.63e-21,56;UBERON:0005068,8.63e-21,56;UBERON:0006241,8.63e-21,56;UBERON:0007135,8.63e-21,56;UBERON:0000073,3.42e-19,53;UBERON:0002616,3.42e-19,53;UBERON:0002780,8.87e-17,41;UBERON:0001890,8.87e-17,41;UBERON:0003080,8.87e-17,41;UBERON:0006240,8.87e-17,41;UBERON:0000955,8.12e-16,68;UBERON:0006238,8.12e-16,68;UBERON:0003528,7.82e-13,34;UBERON:0002020,7.82e-13,34;UBERON:0001893,8.58e-13,34;UBERON:0003075,9.79e-13,82;UBERON:0007284,9.79e-13,82;UBERON:0001017,1.54e-12,81;UBERON:0001016,1.84e-12,89;UBERON:0002346,3.45e-12,86;UBERON:0001869,1.15e-11,32;UBERON:0002791,1.16e-11,32;UBERON:0010314,1.70e-11,132;UBERON:0002619,6.60e-10,22;UBERON:0001950,9.59e-09,20;UBERON:0003056,1.54e-08,61;UBERON:0000956,1.03e-07,25;UBERON:0000203,1.03e-07,25;UBERON:0010371,2.90e-07,104;UBERON:0000125,3.02e-07,9;UBERON:0002308,3.02e-07,9;UBERON:0002420,3.21e-07,9;UBERON:0007245,3.21e-07,9;UBERON:0010009,3.21e-07,9;UBERON:0010011,3.21e-07,9;UBERON:0000454,3.21e-07,9 | |||
|phase1_expression=10.3556676184217,11.9896293378951,12.6858963686374,16.0117277365009,8.93922188854576,11.3404008133048,2.53299878168311,3.15859936713415,7.31319758959548,2.7030733015166,1.39560233594486,3.05817920982241,3.4289707169699,3.58922423584135,4.63956326019082,4.03395087871065,5.42425075221579,8.76372108464848,8.29485757943862,2.95490539384291,2.85600967741954,4.07491137921514,3.72106783270374,3.55873505189499,3.89182182743889,7.64134057479513,7.47115363994506,6.53299484903538,3.14691421479123,1.91914699048606,3.2511385896376,3.67768489791571,2.409647350226,2.9580320813343,8.21152326151197,3.9807385096478,1.76160263600908,2.76997704265939,3.00816671205213,4.12320654360118,8.73270349535705,6.47787332037959,5.15151135268373,4.65274364094607,6.80176698639857,5.82201746850759,3.71886459049095,4.93401465626191,3.40677007984614,2.01384674625505,2.56160706529101,2.12834006899727,3.10271112662957,1.93645405075148,5.41705946377367,5.08254316765033,5.18521685109907,4.94391665779186,4.28517449319264,4.49300637906531,2.55734850319616,4.94776950280074,4.18873681005427,4.26224750532694,0.870627715885752,3.97169657283798,3.11411124497787,2.26123798731069,5.73631210262222,2.38907729175628,8.47559303686716,1.84138817993782,1.58231193720442,2.32380814943136,2.97646019951061,1.25795187305026,1.90958672949042,1.80212271409808,3.2145117339416,2.28010194992999,1.9891667719909,4.56660384411585,1.75996244461323,8.7382177801941,8.00558328477199,6.82768356106412,6.80673177961221,1.14950487990897,5.94940385506376,7.63243003628291,7.96898156753228,8.80855784056408,7.26319133437935,0,2.24203425192614,1.84368859342554,7.08155172409799,8.64623678048162,5.55124047298675,6.8546463110178,6.51844533267181,4.2610302516126,15.5861382726329,4.12218690475142,2.65145316727353,3.32300841875432,2.97884250141517,7.81357050326618,4.68213651215562,7.5641436117691,7.73780049800375,5.79606171470105,6.52460877913066,6.1534390460634,10.4535523804977,7.93165398882963,4.59864592322305,3.09264700934367,5.31341353240956,6.37130828648194,7.1619179924206,4.75226022224187,8.73335690651082,7.29523683580185,4.99722906209383,5.20909954496837,7.39015197228942,5.44338206706778,6.95344509037119,5.50332734754636,17.0664806419773,1.34140171940727,4.34732710268003,4.3372698286148,8.52274448081012,12.7464936685525,1.5905718941022,16.058950719987,3.87592750372678,3.54767035940102,3.86473057049755,15.062593682237,2.91436230634034,2.59549109949101,7.14004266040303,3.83085422058388,4.52057065764142,3.81584998888547,1.71598473234038,4.08603251462521,5.16782259153433,0.860234595106124,5.9013885273291,3.95715559346807,2.51699661725944,4.12677062910101,2.08994966536811,7.75250277507987,6.04802646567407,9.70689777017544,2.01414658554573,3.80136052859256,2.68468263302986,4.04429388380456,8.1014194788176,4.37568668591991,6.06229306090659,6.86930030948266,3.06633274931766,2.84779697870439,4.03043836646896,2.63560834872127,0,0.872188104285069,10.4364109856017,6.71141711822273,15.3594649743334,17.7838704864265,5.32002573297536,6.16745360156538,5.33744978648525,8.38669664618344,7.46906484959439,3.77189881795127,5.06731899651722,4.69208025699287,8.06646294271999,1.40592859100278,7.80400192075801,2.85235910772225,7.47243402759005,3.17073146338165,6.96053660782966,6.03938468819669,9.1869377064702,5.40470996171779,12.1924421787403,20.1960485737949,15.083282685992,3.64064544775211,5.74894513452991,5.72342787443825,4.75450375513464,9.6972440419464,7.90159717585508,6.74273150757843,20.4323760112972,3.40296549480063,12.0191055911538,10.0371972744727,10.8085269591377,8.10245959427886,9.58388521917482,12.3667459221902,10.422543954569,4.05063197379039,6.72315335612271,12.6216887122057,10.6777882425067,9.86040946594752,11.3603069605317,7.15339897416246,7.12154487704048,1.15956511897978,5.18217629122586,5.16248271700207,1.09776335516636,1.06023814657188,1.62671520017326,2.38420426535352,2.01856680700503,0.72995471815166,6.25798129319264,7.71889125831462,8.28809528114883,7.42988684851167,14.4375896333917,4.49565840151407,3.03452442140583,3.61516544825223,2.97793726377464,2.39667388501647,4.50814176311084,3.10112008768378,2.5508790466295,3.07797725557112,2.21446636387394,2.80483547606892,3.7041661019826,5.88034845542168,15.2106041786197,11.7939266001315,18.9052770138049,8.82926198829301,6.3953988042419,4.28919525746314,2.19500570817251,0,2.51322431029077,2.40729957412177,1.95484983186195,3.11980435583874,8.6598805215164,3.4779121492523,5.16598254637615,1.73239737313289,1.85194205030644,4.18559134916116,3.1608175918371,3.43394464837949,5.90920814609754,4.21207677250628,6.8370334652815,5.62403003920662,3.52762469217605,2.41017665312057,3.04498977189684,3.77824120068151,1.15014803749563,0.492663237895943,6.16339038092582,14.7202962033948,14.5561152951131,17.8001831131196,6.1592957463404,8.02175693672383,7.03304683260282,10.2643467613623,6.47813204030938,3.30377363628309,7.71731368102561,3.02753927732474,2.61576041299968,3.3735611477637,7.88557466122444,3.57656445851882,10.988935783228,8.51001973071586,8.32059495290929,4.11531798819427,5.67396528093113,3.72991050622539,6.43400971461664,6.51145926469732,2.46972101034231,4.23457039581856,7.10783897485092,4.75171123760058,10.5503781970855,4.35766729300147,8.19778527692868,0,1.00451418286425,8.43335757932127,11.2623682081044,13.7834323000937,12.8373214536647,8.54209709338717,12.5340556755734,5.37182889719687,5.60425719967636,6.69904584686553,6.03757209606648,5.26206448746968,1.27047312111232,3.90419561572865,3.09315525111078,2.68026024534958,2.55175500661265,3.74503511973591,0,1.65766205374414,5.76650011079957,3.50119364741774,5.42530047399471,8.7347761842939,5.88815663030634,7.7274183366628,17.1026465889361,7.52365249319297,6.82222512167955,9.31257641632544,3.98535359121262,7.19039757312642,8.68836144680829,3.32861967686659,6.86286847621712,7.85718499266972,4.31428401637234,5.97674323699288,3.94065842880137,1.66435439510497,3.62868351995616,13.8940372378515,8.74733247741956,10.6650835884568,12.8139149255701,8.18731598506726,11.7423362434833,10.3892646511494,4.62629081407967,7.10246901252508,6.65229963711854,6.23105315020345,5.34567740915813,5.68039413080624,3.60911646545913,9.76058482720501,6.08516575272416,10.5612877443896,12.063446176267,2.25599806453706,2.6185214615501,3.13739907670742,4.38417673959782,4.11651352682215,1.13733384070897,2.38131187387122,2.37507507712353,0,2.16757150035082,2.50844886927427,4.58777291481069,2.49322802678617,2.91037181138832,3.72741790298089,2.3529190592241,2.05160100093111,2.62411716559765,4.55529752530024,20.402120306249,5.95201521319232,5.61064599459998,1.72279661398852,1.30012049207304,9.64103579064957,4.54352375972973,4.62145851343933,4.75861391651002,4.27293374702045,6.1229539574916,6.52575122614028,5.53973078204656,5.60901824574445,5.61968712227326,5.38132188622297,7.91198817466422,12.6447226069437,9.29691098594571,15.1109926478707,14.6377826733726,8.3169066647544,3.72614221221915,9.5692629128258,5.18907813490976,10.8774913923913,7.07100901783368,7.59310619324942,8.57835872657212,3.58256907835867,8.98671874871233,4.45484547096312,7.06453776179307,6.1156635578327,5.4907405947211,4.00562167975334,1.81964233415984,0,7.58265221230166,2.43816869544795,7.7988316682011,12.6780176108107,6.96149548180727,7.49448789354678,5.65040583101214,6.61638412255349,3.98063385144732,6.13831239355268,2.31510213706675,5.9030527684197,3.85529716229138,3.40805847909725,3.3803472303869,4.01551786171344,4.42120684559045,4.63672366925625,2.48332744849418,8.02209014131124,9.22025700287725,3.03578539012572,3.14941248220485,1.53955380360819,0.670302275535787,2.17781969722645,19.0170477569094,1.72202149068492,1.68471475667626,4.43430153536676,3.90529780351831,4.05958087385735,3.0585488285695,5.69647187174163,4.76463550915578,6.17043409629291,5.83625980073446,4.86028293514303,7.9312517629427,4.48661098735387,15.3996776842137,3.43056302373444,2.60124445176006,5.62649930608135,4.12622691420802,3.98565681822056,0,1.1490322207942,1.90506224451495,3.57084134302011,4.21195767170188,3.19528550646469,4.54371697741767,20.0507581672054,2.37008488922245,5.62058262862948,5.24679238696724,12.3495408930195,3.77855879231341,7.68101910771145,4.47352215784832,9.00985365244306,7.03397143447345,7.51696669517154,1.23087398947712,2.16364542780786,2.66457574398256,8.45922030527097,2.99424864653152,24.4668659384063,6.43210765272421,6.6866030566487,7.38753981696674,13.6084356300483,12.1755519141382,20.5797670406485,33.8010200240541,45.2955520841851,8.45946158174085,6.26254722061686,4.85588438694385,19.1278068721027,21.5501454114295,15.1159648712566,4.19301598258835,6.40040988397561,10.8863855681633,4.13394415277704,4.83357171624145,6.65044081294933,25.4499986543289,2.3948309234694,7.77958931012458,23.2639859062852,40.6324269948908,0,9.63582716015363,4.023159999825,12.3249927823915,3.30001000027949,3.55955110409873,3.78220290828698,6.89486746482929,7.29011533458136,6.07687482266523,39.8583623616228,42.8117357120198,36.6196167161,37.1546313368915,15.0729285666309,40.5862984734849,9.04189247207618,4.1827123283581,24.3932319457037,9.5711326911481,15.217217689612,9.69382559625539,6.08425282763245,7.33702667383415,7.14461228534526,10.6606955203727,1.02193298195737,1.09886179476517,3.98908036560375,9.47501774592159,9.21493911293376,9.06236569669551,4.36433585265626,3.17873157960757,5.06395354867265,3.91758739581955,2.12029607150911,2.380275037163,9.95261931078505,17.5145977716612,9.77648231893801,5.63390144493182,5.06612149680662,3.86361213170185,35.2507925488941,11.236087062183,40.9962780019343,4.37891494117598,5.47860933009851,3.15614493394321,20.5183889481683,3.62972148145992,8.26396456402323,15.7334583274935,1.9542044523884,4.45859223008163,12.6284235814365,12.9086862791445,10.3597863074384,8.36307008410712,4.83836228250648,6.65638430463066,2.95051555169723,5.6835590500339,2.61177619741208,19.7441135113494,6.53546923392143,5.51511088347785,7.30893170861856,5.25538925140539,20.0767264131028,8.73735654245853,13.3328637060514,1.50746117111426,13.1151643723973,38.0497883694831,6.84429839571811,7.05397618213497,24.9740003845043,10.3900996982708,4.8990741832396,5.61229321212987,8.75134489096019,8.49923308130083,6.46113184940249,7.77790314235425,5.97978506723902,8.05441916604966,3.56993761727126,2.31160471921215,29.4205941467797,60.101461333585,16.6070564487064,15.0417904496985,3.6804229599104,32.3967585475815,32.7699406336708,35.8936512288407,7.98716001995964,7.2968428183217,19.8622597123267,8.53230100581423,10.8089965062721,11.6495949527454,6.30265458457789,6.67568452887448,7.61660045552289,4.4292366681637,3.21758661849981,28.6282688331349,57.3416339729733,0.964518890790115,0.825236619583403,1.24632101408756,1.1248694577575,8.51182150013745,35.6599897582605,3.35434687599266,13.8698044846589,7.29118775076474,8.02562557547489,4.66147082265396,9.40384466865282,15.7232971802141,7.94510364438518,4.068296602476,11.402991636828,6.91377192961014,6.53174720218818,8.38111340937412,4.26881107896563,10.0528932853399,3.39936274560377,8.20692508597262,3.97520666736664,44.7319029010965,38.3474545053801,4.96151829864555,5.63852017853338,17.5131356611019,16.0348391201659,10.7702154390271,5.45782623993146,7.11401874832599,2.67943716437971,1.91502377331055,13.6004450842369,15.041393641362,14.3982421078827,9.83617892129413,8.32386710126242,40.7591362784814,35.7536956162752,42.4397255095034,23.5097770232929,40.7109619140248,34.8981784530575,7.74752355642893,4.24933387071162,3.03298235083296,3.42558400253961,9.41063278792687,6.55668868129634,3.4781046866598,3.88062487505873,9.34853239388898,7.76728206103659,7.0079111951783,9.81114816835043,10.6777346591584,11.2131633514493,9.37631727332082,7.77186002913902,6.80133689952316,6.3718706865481,17.092518262217,7.91841080068923,11.611773819544,7.17772629306586,10.4349012362347,10.3677750208081,6.09288339470073,6.10306099806992,5.45545977607678,7.62614955001668,13.9210127963548,17.9143149914377,4.00027764663154,4.12074846219351,8.08198773038206,20.1895837165842,10.0162311811798,4.71771501024837,4.69789725537381,6.80117776536817,10.4185113445725,5.87368090815522,13.4316630811116,3.39681591877069,8.77136198314828,5.65405267026819,2.89371057406372,6.08192786351062,2.81865670446741,4.83602478423678,4.55789934266073,55.7181497691475,5.84580926518165,7.70616073817506,6.86974655874546,11.7939545584709,2.70350199629091,6.12805157740018,2.19986135440423,4.37436091745978,3.78872955253794,8.51273930350254,4.0503309055405,5.45530080105833,5.59869534029676,6.52261293648624,3.5582187760905,3.93164854639741,8.84598069355313,2.37625541935635,11.2664707653892,5.32923786313709,8.9383186875719,7.31410006502863,8.35934497013286,1.60114149657094,5.29013915536026,4.8999276376512,38.7302227331651,41.0920071344196,61.9379373141747,29.1265237221872,2.52071696221718,24.9657681395827,45.2131807769183,78.5231811425349,3.82776102154,2.59533391365029,2.38457178078183,3.00366731990879,13.3483733413509,5.52287940848081,4.37615688655804,18.9530027440128,5.84944699240208,9.37816813479711,6.28576066755414,6.87842053542406,4.87925084516249,39.8471749248528,26.5566553528708,54.5653142763126,38.4933967877014,4.37579847214576,12.061670870858,20.8408694923504,7.03484977438482,4.59944739502543,31.0707064809406,20.8495907775671,37.0249018584345,38.7025725297206,20.135438026919,7.14450722845831,6.5165443586219,34.1208059543695,25.4540633688226,4.37317211270682,3.11447925297794,29.6703890974943,54.5191097008527,8.12789273609988,10.9579046461139,1.94334832096759,8.12177869407985,21.2285336204669,6.63657169277452,5.23086414156564,3.12944890144643,17.6376500240656,6.00926876072807,8.5359238546975,13.8251932362818,13.7672754822489,6.38992803945053,7.2431394045284,19.0524172585918,11.2262365586585,6.82454048461504,6.68877257284203,7.38245849865429,4.71121121353166,3.90137359943262,15.5382920925095,18.1713168135557,5.799072156691,14.5713297917742,4.67878926924211,6.36642480516378,3.92436299565976,1.46829906650648,5.82684738750774,5.88755089910027,16.746792309424,6.33822725461476,5.64380755633827,21.0827556708359,7.3059729601504,29.2499616001268,40.1012640441566,15.6382619205858,9.17606419314211,11.6540058295018,6.38133090938414,3.49794045737251,8.57058905307156,4.58763333230399,5.21568883479594,16.0674005414234,16.5142542025635,38.7016874508919,2.36657343289777,23.3210811354837,5.23620828408453,13.7546978534004,13.7638156721698,12.9409176016797,8.21990468035199,3.91115916988745,1.20192129160065,1.64708051314868,7.2412069116807,2.93939145792117,11.3030726427859,1.0028301571695,14.0190591703743,15.005991288746,20.7292359864695,59.267106628866,14.7131447511677,8.80838396415839,8.13820263933677,9.99402900163312,6.27938430451435,20.3670906490128,13.3397344712425,14.8047388569934,7.1868993227909,8.75576689189638,16.7112738564936,10.3124710529264,4.72138957943652,6.93727748205151,13.5150597600858,6.55723975378084,16.4248659682418,20.0475968459901,6.10344267473608,53.9262987090265,10.2649634731423,4.80852738454849 | |||
|short_description=p1@PURA | |||
}} |
Latest revision as of 01:14, 25 September 2015
Short description: | p1@PURA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PURA_5end |
Coexpression cluster: | C1130_optic_globus_thalamus_spinal_occipital_locus_pons |
Association with transcript: | 1bp_to_ENST00000505703_5end |
EntrezGene: | PURA |
HGNC: | 9701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data