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FFCP PHASE1:Mm9::chr17:29374721..29374772,-: Difference between revisions

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{{FFCP|EntrezGene=240058|HGNC=|MCL_coexpression_id=2201|UniProt=Q8JZW4,E9Q7V9|association_with_transcript=0bp_to_ENSMUST00000024805,ENSMUST00000057091,NM_153166,uc008bsk.2,uc008bsl.2_5end|description=CAGE_peak_2_at_Cpne5_5end|id=chr17:29374721..29374772,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,7.60e-07,23;CL:0000337,7.60e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.20e-12!49;UBERON:0002346!1.83e-12!71;UBERON:0003075!1.83e-12!71;UBERON:0007284!1.83e-12!71;UBERON:0001049!2.10e-12!52;UBERON:0005068!2.10e-12!52;UBERON:0006241!2.10e-12!52;UBERON:0007135!2.10e-12!52;UBERON:0002020!5.14e-11!34;UBERON:0000033!9.83e-11!63;UBERON:0003080!1.31e-10!40;UBERON:0000955!4.89e-10!50;UBERON:0006238!4.89e-10!50;UBERON:0002780!5.48e-10!39;UBERON:0001890!5.48e-10!39;UBERON:0006240!5.48e-10!39;UBERON:0002616!1.70e-09!49;UBERON:0004121!1.33e-08!102;UBERON:0000924!1.33e-08!102;UBERON:0006601!1.33e-08!102;UBERON:0001017!3.67e-08!73;UBERON:0005743!3.67e-08!73;UBERON:0002791!3.97e-08!29;UBERON:0003528!3.97e-08!29;UBERON:0001893!3.97e-08!29;UBERON:0002021!5.55e-08!10;UBERON:0000411!5.55e-08!10;UBERON:0001950!5.55e-08!10;UBERON:0000073!1.07e-07!75;UBERON:0001016!1.07e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-13,54;UBERON:0001049,1.19e-13,52;UBERON:0005068,1.19e-13,52;UBERON:0006241,1.19e-13,52;UBERON:0007135,1.19e-13,52;UBERON:0002020,6.34e-13,34;UBERON:0002346,9.22e-13,64;UBERON:0003075,9.22e-13,64;UBERON:0007284,9.22e-13,64;UBERON:0010314,1.09e-11,92;UBERON:0003056,2.87e-11,49;UBERON:0010371,5.73e-11,73;UBERON:0003080,6.36e-11,40;UBERON:0001017,8.48e-11,73;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002780,3.57e-10,39;UBERON:0001890,3.57e-10,39;UBERON:0006240,3.57e-10,39;UBERON:0001016,3.86e-10,75;UBERON:0002021,5.22e-10,10;UBERON:0000411,5.22e-10,10;UBERON:0001950,5.22e-10,10;UBERON:0002616,8.81e-10,46;UBERON:0003528,3.04e-09,29;UBERON:0002791,3.04e-09,29;UBERON:0001893,3.04e-09,29;UBERON:0004121,3.69e-09,95;UBERON:0000924,3.69e-09,95;UBERON:0006601,3.69e-09,95|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,5.70448263155561,0,0.889294796111139,0,0,0,0,0,0,0.405017814995072,0.210324961351382,7.9982275633065,3.97563373712904,0.734944795289724,1.34183659425531,0,0,2.42605942361857,2.15049146558741,1.18697658957174,3.29355516968675,1.04182674111352,2.23346399201105,2.25105044012672,2.29197371665215,10.9012576625257,7.26095572075425,3.16879057903011,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,2.77576522825817,1.52232739156071,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,8.98743836428936,36.1425476226715,9.5497307605777,13.5582969749976,13.5529192385075,6.64921742590592,15.412919991437,3.7680564624617,1.36847667671102,11.3725241295154,0.420883711772948,0.650602214813519,1.60931473103431,3.24111833649629,0.753524089178575,0.884474488967262,1.40925092313335,1.68663104207512,3.10444044886819,0.431135985865684,1.13463648100692,2.63926686245923,3.28793598641362,2.22437799380478,4.179025998266,3.70407845534298,4.57778813682534,0,0,0,3.31401236056803,1.87620847984877,1.62055855314913,3.31442629819294,1.18058539048442,1.3884040159864,1.62773761325285,1.3413670069981,0.934122738937356,1.15191894939436,0.164167464079095,0.486412857275134,0.146199987425332,0,1.34206418760372,1.68231958851302,0.308713837137853,0,0,0.853153002140936,3.71578674976702,1.80414445850931,1.00841762311671,0.444756087689741,1.14135375667535,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,2.4633883530163,0.814824882210129,1.01847051465113,0,0.670025029767263,0.476087281772027,0,0,0,0,0,0.172684981865896,0.723245292907558,0,0,0,0,1.60550589987792,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.283880170416537,5.52003371368491,2.60619134965722,0.329940245945071,0,0.728341908464944,1.81394134178851,0.565815239267694,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,1.44048875225048,2.45781499187234,1.71469628025274,0.886701168211368,0.356737635204141,0.822745103010605,1.2178597964584,0.23467170806371,0,0,0.16488625294148,3.39075296061402,1.32688434841943,0.954978752025092,0.656563598980245,0,2.03967832211561,0,1.03193433981611,0,0,0,0,0.169978429993855,0,0,0,0.474503990371703,2.03319467126849,1.18805874903981,1.25452977608681,0.436725127492355,0.539457385539283,0.578574190077352,0,0,0,0.56369293868419,1.04661582230785,2.81279433777066,3.88902376688095,4.39143399824286,5.06868376472335,3.28600268208111,2.3436789271911,1.57289016638566,0,1.44015003128933,0,1.21635129174099,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0,0,5.64751842617067,3.68260189205742,8.02053718815155,4.46818274093588,8.22099023724771,6.7985450765073,6.75022500231806,4.5032120322422,5.43770890781046,7.7664046762773,0.415149390336707,2.39414924040619,1.19513524027894,1.21553358534147,1.25767897576789,0.735374033800057,1.33348036680969,1.64828045791115,2.88827288632634,2.27427490587418,0.760437899670719,0.943131706930381,1.12369808963859,1.34452820050225,1.43588672389033,0.476293691283074,1.50649623728312,1.35036454324594,0.412085900803307,1.47198920134397,0.342869252385415,0.70990322463735,2.62279808942053,0.581385666529314,1.12931256498397,1.69229215783353,1.28049581010941,1.05227884575137,0.407412341537585,1.68342681497322,1.18635018124174,1.97008964751127,1.22769312950907,1.23949472948773,0.578719832943424,4.24677982494508,1.40358965067245,1.71896843238639,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p2@Cpne5}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=240058
|HGNC=
|MCL_coexpression_id=2201
|TSSclassifier=NA
|UniProt=Q8JZW4,E9Q7V9
|association_with_transcript=0bp_to_ENSMUST00000024805,ENSMUST00000057091,NM_153166,uc008bsk.2,uc008bsl.2_5end
|cluster_id=chr17:29374721..29374772,-
|description=CAGE_peak_2_at_Cpne5_5end
|id=chr17:29374721..29374772,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,7.60e-07,23;CL:0000337,7.60e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.20e-12!49;UBERON:0002346!1.83e-12!71;UBERON:0003075!1.83e-12!71;UBERON:0007284!1.83e-12!71;UBERON:0001049!2.10e-12!52;UBERON:0005068!2.10e-12!52;UBERON:0006241!2.10e-12!52;UBERON:0007135!2.10e-12!52;UBERON:0002020!5.14e-11!34;UBERON:0000033!9.83e-11!63;UBERON:0003080!1.31e-10!40;UBERON:0000955!4.89e-10!50;UBERON:0006238!4.89e-10!50;UBERON:0002780!5.48e-10!39;UBERON:0001890!5.48e-10!39;UBERON:0006240!5.48e-10!39;UBERON:0002616!1.70e-09!49;UBERON:0004121!1.33e-08!102;UBERON:0000924!1.33e-08!102;UBERON:0006601!1.33e-08!102;UBERON:0001017!3.67e-08!73;UBERON:0005743!3.67e-08!73;UBERON:0002791!3.97e-08!29;UBERON:0003528!3.97e-08!29;UBERON:0001893!3.97e-08!29;UBERON:0002021!5.55e-08!10;UBERON:0000411!5.55e-08!10;UBERON:0001950!5.55e-08!10;UBERON:0000073!1.07e-07!75;UBERON:0001016!1.07e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.09e-13,54;UBERON:0001049,1.19e-13,52;UBERON:0005068,1.19e-13,52;UBERON:0006241,1.19e-13,52;UBERON:0007135,1.19e-13,52;UBERON:0002020,6.34e-13,34;UBERON:0002346,9.22e-13,64;UBERON:0003075,9.22e-13,64;UBERON:0007284,9.22e-13,64;UBERON:0010314,1.09e-11,92;UBERON:0003056,2.87e-11,49;UBERON:0010371,5.73e-11,73;UBERON:0003080,6.36e-11,40;UBERON:0001017,8.48e-11,73;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002780,3.57e-10,39;UBERON:0001890,3.57e-10,39;UBERON:0006240,3.57e-10,39;UBERON:0001016,3.86e-10,75;UBERON:0002021,5.22e-10,10;UBERON:0000411,5.22e-10,10;UBERON:0001950,5.22e-10,10;UBERON:0002616,8.81e-10,46;UBERON:0003528,3.04e-09,29;UBERON:0002791,3.04e-09,29;UBERON:0001893,3.04e-09,29;UBERON:0004121,3.69e-09,95;UBERON:0000924,3.69e-09,95;UBERON:0006601,3.69e-09,95
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,5.70448263155561,0,0.889294796111139,0,0,0,0,0,0,0.405017814995072,0.210324961351382,7.9982275633065,3.97563373712904,0.734944795289724,1.34183659425531,0,0,2.42605942361857,2.15049146558741,1.18697658957174,3.29355516968675,1.04182674111352,2.23346399201105,2.25105044012672,2.29197371665215,10.9012576625257,7.26095572075425,3.16879057903011,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,2.77576522825817,1.52232739156071,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,8.98743836428936,36.1425476226715,9.5497307605777,13.5582969749976,13.5529192385075,6.64921742590592,15.412919991437,3.7680564624617,1.36847667671102,11.3725241295154,0.420883711772948,0.650602214813519,1.60931473103431,3.24111833649629,0.753524089178575,0.884474488967262,1.40925092313335,1.68663104207512,3.10444044886819,0.431135985865684,1.13463648100692,2.63926686245923,3.28793598641362,2.22437799380478,4.179025998266,3.70407845534298,4.57778813682534,0,0,0,3.31401236056803,1.87620847984877,1.62055855314913,3.31442629819294,1.18058539048442,1.3884040159864,1.62773761325285,1.3413670069981,0.934122738937356,1.15191894939436,0.164167464079095,0.486412857275134,0.146199987425332,0,1.34206418760372,1.68231958851302,0.308713837137853,0,0,0.853153002140936,3.71578674976702,1.80414445850931,1.00841762311671,0.444756087689741,1.14135375667535,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.193952487167626,0.210407459670956,0,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,2.4633883530163,0.814824882210129,1.01847051465113,0,0.670025029767263,0.476087281772027,0,0,0,0,0,0.172684981865896,0.723245292907558,0,0,0,0,1.60550589987792,1.52375192569864,0,0,0,0,0,0,0,0,0,0,0,6.10510501201433,0.283880170416537,5.52003371368491,2.60619134965722,0.329940245945071,0,0.728341908464944,1.81394134178851,0.565815239267694,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,1.44048875225048,2.45781499187234,1.71469628025274,0.886701168211368,0.356737635204141,0.822745103010605,1.2178597964584,0.23467170806371,0,0,0.16488625294148,3.39075296061402,1.32688434841943,0.954978752025092,0.656563598980245,0,2.03967832211561,0,1.03193433981611,0,0,0,0,0.169978429993855,0,0,0,0.474503990371703,2.03319467126849,1.18805874903981,1.25452977608681,0.436725127492355,0.539457385539283,0.578574190077352,0,0,0,0.56369293868419,1.04661582230785,2.81279433777066,3.88902376688095,4.39143399824286,5.06868376472335,3.28600268208111,2.3436789271911,1.57289016638566,0,1.44015003128933,0,1.21635129174099,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0,0,5.64751842617067,3.68260189205742,8.02053718815155,4.46818274093588,8.22099023724771,6.7985450765073,6.75022500231806,4.5032120322422,5.43770890781046,7.7664046762773,0.415149390336707,2.39414924040619,1.19513524027894,1.21553358534147,1.25767897576789,0.735374033800057,1.33348036680969,1.64828045791115,2.88827288632634,2.27427490587418,0.760437899670719,0.943131706930381,1.12369808963859,1.34452820050225,1.43588672389033,0.476293691283074,1.50649623728312,1.35036454324594,0.412085900803307,1.47198920134397,0.342869252385415,0.70990322463735,2.62279808942053,0.581385666529314,1.12931256498397,1.69229215783353,1.28049581010941,1.05227884575137,0.407412341537585,1.68342681497322,1.18635018124174,1.97008964751127,1.22769312950907,1.23949472948773,0.578719832943424,4.24677982494508,1.40358965067245,1.71896843238639,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p2@Cpne5
}}

Latest revision as of 04:55, 26 September 2015

Short description:p2@Cpne5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cpne5_5end
Coexpression cluster:MCL_coexpression_mm9:2201
Association with transcript: 0bp_to_ENSMUST00000024805, ENSMUST00000057091, NM_153166, uc008bsk.2, uc008bsl.2_5end
EntrezGene:Cpne5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cpne5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F19.55
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F213.55
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.60e-0723
neuroblast (sensu Vertebrata)7.60e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.09e-1354
neural tube1.19e-1352
neural rod1.19e-1352
future spinal cord1.19e-1352
neural keel1.19e-1352
gray matter6.34e-1334
neurectoderm9.22e-1364
neural plate9.22e-1364
presumptive neural plate9.22e-1364
structure with developmental contribution from neural crest1.09e-1192
pre-chordal neural plate2.87e-1149
ecto-epithelium5.73e-1173
anterior neural tube6.36e-1140
central nervous system8.48e-1173
brain1.91e-1047
future brain1.91e-1047
regional part of forebrain3.57e-1039
forebrain3.57e-1039
future forebrain3.57e-1039
nervous system3.86e-1075
occipital lobe5.22e-1010
visual cortex5.22e-1010
neocortex5.22e-1010
regional part of brain8.81e-1046
brain grey matter3.04e-0929
regional part of telencephalon3.04e-0929
telencephalon3.04e-0929
ectoderm-derived structure3.69e-0995
ectoderm3.69e-0995
presumptive ectoderm3.69e-0995
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